RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 SERF2P84101 59 aa8.65□□□□□ -1.02
TPM1-210ENST00000558264 NCMAPQ5T1S8 102 aa8.65□□□□□ -1.02
TPM1-210ENST00000558264 DPPA3Q6W0C5 159 aa8.65□□□□□ -1.02
TPM1-210ENST00000558264 OR10G4Q8NGN3 311 aa8.65□□□□□ -1.02
TPM1-210ENST00000558264 OR10G9Q8NGN4 311 aa8.65□□□□□ -1.02
TPM1-210ENST00000558264 OR10G7Q8NGN6 311 aa8.65□□□□□ -1.02
TPM1-210ENST00000558264 FAM122AQ96E09 287 aa8.65□□□□□ -1.02
TPM1-210ENST00000558264 ANKHD1Q8IWZ3 2542 aaKnown RBP8.65□□□□□ -1.03
TPM1-210ENST00000558264 SRRM4A7MD48 611 aaKnown RBP8.65□□□□□ -1.03
TPM1-210ENST00000558264 DVL1O14640 695 aa8.65□□□□□ -1.03
TPM1-210ENST00000558264 IFNA4P05014 189 aa8.65□□□□□ -1.03
TPM1-210ENST00000558264 CT45A6P0DMU7 189 aa8.65□□□□□ -1.03
TPM1-210ENST00000558264 CT45A5P0DMU8 189 aa8.65□□□□□ -1.03
TPM1-210ENST00000558264 CT45A7P0DMV0 189 aa8.65□□□□□ -1.03
TPM1-210ENST00000558264 BCL2P10415 239 aa8.65□□□□□ -1.03
TPM1-210ENST00000558264 SPCS3P61009 180 aa8.65□□□□□ -1.03
TPM1-210ENST00000558264 HIST1H2BAQ96A08 127 aa8.65□□□□□ -1.03
TPM1-210ENST00000558264 URGCP-MRPS24S4R325 110 aa8.65□□□□□ -1.03
TPM1-210ENST00000558264 SIAH2O43255 324 aa8.64□□□□□ -1.03
TPM1-210ENST00000558264 LY6HO94772 140 aa8.64□□□□□ -1.03
TPM1-210ENST00000558264 CD1BP29016 333 aa8.64□□□□□ -1.03
TPM1-210ENST00000558264 VDAC2P45880 294 aaPredicted RBP8.64□□□□□ -1.03
TPM1-210ENST00000558264 THBS3P49746 956 aa8.64□□□□□ -1.03
TPM1-210ENST00000558264 AVPI1Q5T686 147 aa8.64□□□□□ -1.03
TPM1-210ENST00000558264 SLC25A48Q6ZT89 311 aaKnown RBP8.64□□□□□ -1.03
TPM1-210ENST00000558264 ZNF709Q8N972 641 aa8.64□□□□□ -1.03
TPM1-210ENST00000558264 ZNF714Q96N38 554 aa8.64□□□□□ -1.03
TPM1-210ENST00000558264 MRPL20Q9BYC9 149 aaKnown RBP8.64□□□□□ -1.03
TPM1-210ENST00000558264 HIPK2Q9H2X6 1198 aa8.64□□□□□ -1.03
TPM1-210ENST00000558264 SLC35D1Q9NTN3 355 aa8.64□□□□□ -1.03
TPM1-210ENST00000558264 LINC00312Q9Y6C7 94 aa8.64□□□□□ -1.03
TPM1-210ENST00000558264 RBFOX2O43251 390 aaKnown RBP eCLIP8.64□□□□□ -1.03
TPM1-210ENST00000558264 HSPB1P04792 205 aaKnown RBP8.64□□□□□ -1.03
TPM1-210ENST00000558264 TAGLN2P37802 199 aaKnown RBP8.64□□□□□ -1.03
TPM1-210ENST00000558264 DLK1P80370 383 aa8.64□□□□□ -1.03
TPM1-210ENST00000558264 ZNF343Q6P1L6 599 aa8.64□□□□□ -1.03
TPM1-210ENST00000558264 C1orf87Q8N0U7 546 aa8.64□□□□□ -1.03
TPM1-210ENST00000558264 OR13D1Q8NGV5 346 aa8.64□□□□□ -1.03
TPM1-210ENST00000558264 MBD3L1Q8WWY6 194 aa8.64□□□□□ -1.03
TPM1-210ENST00000558264 PATZ1Q9HBE1 687 aaKnown RBP8.64□□□□□ -1.03
TPM1-210ENST00000558264 NGBQ9NPG2 151 aa8.64□□□□□ -1.03
TPM1-210ENST00000558264 CISD1Q9NZ45 108 aaKnown RBP8.64□□□□□ -1.03
TPM1-210ENST00000558264 C15orf61A6NNL5 157 aa8.63□□□□□ -1.03
TPM1-210ENST00000558264 NDUFB3O43676 98 aa8.63□□□□□ -1.03
TPM1-210ENST00000558264 SOX15O60248 233 aa8.63□□□□□ -1.03
TPM1-210ENST00000558264 CD3EP07766 207 aa8.63□□□□□ -1.03
TPM1-210ENST00000558264 ATP6V1FQ16864 119 aa8.63□□□□□ -1.03
TPM1-210ENST00000558264 ZNF674Q2M3X9 581 aa8.63□□□□□ -1.03
TPM1-210ENST00000558264 KHDC3LQ587J8 217 aa8.63□□□□□ -1.03
TPM1-210ENST00000558264 SSMEM1Q8WWF3 244 aa8.63□□□□□ -1.03
TPM1-210ENST00000558264 RAB24Q969Q5 203 aa8.63□□□□□ -1.03
TPM1-210ENST00000558264 DIRC2Q96SL1 478 aa8.63□□□□□ -1.03
TPM1-210ENST00000558264 MS4A5Q9H3V2 200 aa8.63□□□□□ -1.03
TPM1-210ENST00000558264 TRAV1-1A0A0B4J248 108 aa8.63□□□□□ -1.03
TPM1-210ENST00000558264 CASP6P55212 293 aa8.63□□□□□ -1.03
TPM1-210ENST00000558264 GNB2P62879 340 aa8.63□□□□□ -1.03
TPM1-210ENST00000558264 FAM90A2PQ658T7 463 aa8.63□□□□□ -1.03
TPM1-210ENST00000558264 Q8N7P7 452 aa8.63□□□□□ -1.03
TPM1-210ENST00000558264 NIPSNAP3BQ9BS92 247 aa8.63□□□□□ -1.03
TPM1-210ENST00000558264 GAL3ST2Q9H3Q3 398 aa8.63□□□□□ -1.03
TPM1-210ENST00000558264 RAB9BQ9NP90 201 aa8.63□□□□□ -1.03
TPM1-210ENST00000558264 IGHV1-69-2A0A0G2JMI3 117 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 VSTM5A8MXK1 200 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 OR2C1O95371 312 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 CTRB1P17538 263 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 CA7P43166 264 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 KIR2DS2P43631 304 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 AKR1D1P51857 326 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 FLI1Q01543 452 aaPredicted RBP8.62□□□□□ -1.03
TPM1-210ENST00000558264 RHEBQ15382 184 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 CTRB2Q6GPI1 263 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 MOB3BQ86TA1 216 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 CA5BP1Q8WTZ4 195 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 CORO2AQ92828 525 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 PARD6GQ9BYG4 376 aaPredicted RBP8.62□□□□□ -1.03
TPM1-210ENST00000558264 NCOR1P1Q9H4R4 102 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 OR51B2Q9Y5P1 312 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 IGHV3-72A0A0B4J1Y9 119 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 TSPAN9O75954 239 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 CA2P00918 260 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 LOXP28300 417 aaPredicted RBP8.62□□□□□ -1.03
TPM1-210ENST00000558264 RPL35P42766 123 aaKnown RBP8.62□□□□□ -1.03
TPM1-210ENST00000558264 LY6DQ14210 128 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 LRRC10Q5BKY1 277 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 MIC13Q5XKP0 118 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 TREML4Q6UXN2 200 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 C15orf54Q8N8G6 183 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 KDF1Q8NAX2 398 aaPredicted RBP8.62□□□□□ -1.03
TPM1-210ENST00000558264 OR10X1Q8NGY0 326 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 RPUSD4Q96CM3 377 aaKnown RBP8.62□□□□□ -1.03
TPM1-210ENST00000558264 TIMM9Q9Y5J7 89 aa8.62□□□□□ -1.03
TPM1-210ENST00000558264 C1QTNF9P0C862 333 aa8.61□□□□□ -1.03
TPM1-210ENST00000558264 SAA1P0DJI8 122 aaPredicted RBP8.61□□□□□ -1.03
TPM1-210ENST00000558264 CHRNB4P30926 498 aa8.61□□□□□ -1.03
TPM1-210ENST00000558264 APOBEC3AP31941 199 aaPredicted RBP8.61□□□□□ -1.03
TPM1-210ENST00000558264 RAB13P51153 203 aa8.61□□□□□ -1.03
TPM1-210ENST00000558264 UBE2G2P60604 165 aa8.61□□□□□ -1.03
TPM1-210ENST00000558264 KIAA0141Q14154 515 aaPredicted RBP8.61□□□□□ -1.03
TPM1-210ENST00000558264 HABP2Q14520 560 aaPredicted RBP8.61□□□□□ -1.03
TPM1-210ENST00000558264 VWC2Q2TAL6 325 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms