RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 H2AFB2P0C5Z0 115 aa16.81■□□□□ 0.28
CASC4-204ENST00000557945 UBE2MP61081 183 aaKnown RBP16.81■□□□□ 0.28
CASC4-204ENST00000557945 C4orf46Q504U0 113 aa16.81■□□□□ 0.28
CASC4-204ENST00000557945 ZNF695Q8IW36 515 aa16.81■□□□□ 0.28
CASC4-204ENST00000557945 FOXRED2Q8IWF2 684 aa16.81■□□□□ 0.28
CASC4-204ENST00000557945 TMEM167AQ8TBQ9 72 aa16.81■□□□□ 0.28
CASC4-204ENST00000557945 CASTOR1Q8WTX7 329 aa16.81■□□□□ 0.28
CASC4-204ENST00000557945 ZNF430Q9H8G1 570 aaPredicted RBP16.81■□□□□ 0.28
CASC4-204ENST00000557945 PALMDQ9NP74 551 aa16.81■□□□□ 0.28
CASC4-204ENST00000557945 PARP11Q9NR21 331 aa16.81■□□□□ 0.28
CASC4-204ENST00000557945 RNF114Q9Y508 228 aa16.81■□□□□ 0.28
CASC4-204ENST00000557945 NUBP2Q9Y5Y2 271 aa16.81■□□□□ 0.28
CASC4-204ENST00000557945 A0A1B0GUS0 222 aa16.8■□□□□ 0.28
CASC4-204ENST00000557945 HAX1O00165 279 aa16.8■□□□□ 0.28
CASC4-204ENST00000557945 ACTL6BO94805 426 aa16.8■□□□□ 0.28
CASC4-204ENST00000557945 ATG12O94817 140 aa16.8■□□□□ 0.28
CASC4-204ENST00000557945 SFT2D2O95562 160 aa16.8■□□□□ 0.28
CASC4-204ENST00000557945 CDS2O95674 445 aa16.8■□□□□ 0.28
CASC4-204ENST00000557945 AKR1C2P52895 323 aa16.8■□□□□ 0.28
CASC4-204ENST00000557945 RAB25P57735 213 aa16.8■□□□□ 0.28
CASC4-204ENST00000557945 TMEM187Q14656 261 aa16.8■□□□□ 0.28
CASC4-204ENST00000557945 TNXAQ16473 311 aa16.8■□□□□ 0.28
CASC4-204ENST00000557945 TMEM268Q5VZI3 342 aa16.8■□□□□ 0.28
CASC4-204ENST00000557945 ZNF562Q6V9R5 426 aa16.8■□□□□ 0.28
CASC4-204ENST00000557945 H2BFWTQ7Z2G1 175 aa16.8■□□□□ 0.28
CASC4-204ENST00000557945 MMD2Q8IY49 270 aa16.8■□□□□ 0.28
CASC4-204ENST00000557945 OR4A5Q8NH83 315 aa16.8■□□□□ 0.28
CASC4-204ENST00000557945 RNASE11Q8TAA1 199 aaKnown RBP16.8■□□□□ 0.28
CASC4-204ENST00000557945 OR51J1Q9H342 316 aa16.8■□□□□ 0.28
CASC4-204ENST00000557945 SERTAD4Q9NUC0 356 aa16.8■□□□□ 0.28
CASC4-204ENST00000557945 BET1LQ9NYM9 111 aa16.8■□□□□ 0.28
CASC4-204ENST00000557945 LINC00527Q9UJ94 153 aa16.8■□□□□ 0.28
CASC4-204ENST00000557945 OR4E1P0C645 316 aa16.79■□□□□ 0.28
CASC4-204ENST00000557945 DCTN2Q13561 401 aaKnown RBP16.79■□□□□ 0.28
CASC4-204ENST00000557945 FXYD3Q14802 87 aa16.79■□□□□ 0.28
CASC4-204ENST00000557945 MRGPRG-AS1Q2M3A8 158 aa16.79■□□□□ 0.28
CASC4-204ENST00000557945 AWAT1Q58HT5 328 aa16.79■□□□□ 0.28
CASC4-204ENST00000557945 SELENOHQ8IZQ5 122 aaKnown RBP16.79■□□□□ 0.28
CASC4-204ENST00000557945 LHFPL5Q8TAF8 219 aa16.79■□□□□ 0.28
CASC4-204ENST00000557945 SEC22AQ96IW7 307 aa16.79■□□□□ 0.28
CASC4-204ENST00000557945 MMP24Q9Y5R2 645 aa16.79■□□□□ 0.28
CASC4-204ENST00000557945 TRAV3A0A0B4J244 114 aa16.78■□□□□ 0.28
CASC4-204ENST00000557945 AP4M1O00189 453 aa16.78■□□□□ 0.28
CASC4-204ENST00000557945 UPK2O00526 184 aa16.78■□□□□ 0.28
CASC4-204ENST00000557945 ATP6V0E1O15342 81 aa16.78■□□□□ 0.28
CASC4-204ENST00000557945 HLA-AP01891 365 aaKnown RBP16.78■□□□□ 0.28
CASC4-204ENST00000557945 SRPXP78539 464 aa16.78■□□□□ 0.28
CASC4-204ENST00000557945 NDPQ00604 133 aa16.78■□□□□ 0.28
CASC4-204ENST00000557945 PLET1Q6UQ28 207 aa16.78■□□□□ 0.28
CASC4-204ENST00000557945 LGI3Q8N145 548 aa16.78■□□□□ 0.28
CASC4-204ENST00000557945 GRPEL2Q8TAA5 225 aa16.78■□□□□ 0.28
CASC4-204ENST00000557945 ARPC1AQ92747 370 aa16.78■□□□□ 0.28
CASC4-204ENST00000557945 RBPMSQ93062 196 aaKnown RBP16.78■□□□□ 0.28
CASC4-204ENST00000557945 RRNAD1Q96FB5 475 aaKnown RBP16.78■□□□□ 0.28
CASC4-204ENST00000557945 TMEM56Q96MV1 263 aa16.78■□□□□ 0.28
CASC4-204ENST00000557945 NOL4LQ96MY1 436 aaPredicted RBP16.78■□□□□ 0.28
CASC4-204ENST00000557945 TMEM56-RWDD3S4R434 201 aa16.78■□□□□ 0.28
CASC4-204ENST00000557945 C9orf170A2RU37 121 aa16.77■□□□□ 0.28
CASC4-204ENST00000557945 PLXNB1O43157 2135 aa16.77■□□□□ 0.28
CASC4-204ENST00000557945 SNAPC5O75971 98 aa16.77■□□□□ 0.28
CASC4-204ENST00000557945 IGKV1-5P01602 117 aa16.77■□□□□ 0.28
CASC4-204ENST00000557945 RPL8P62917 257 aaKnown RBP16.77■□□□□ 0.28
CASC4-204ENST00000557945 DUSP18Q8NEJ0 188 aa16.77■□□□□ 0.28
CASC4-204ENST00000557945 FAM103A1Q9BTL3 118 aaKnown RBP16.77■□□□□ 0.28
CASC4-204ENST00000557945 NSG2Q9Y328 171 aa16.77■□□□□ 0.28
CASC4-204ENST00000557945 OR9G9P0C7N8 305 aa16.77■□□□□ 0.27
CASC4-204ENST00000557945 HLA-GP17693 338 aa16.77■□□□□ 0.27
CASC4-204ENST00000557945 DHRS2Q13268 280 aa16.77■□□□□ 0.27
CASC4-204ENST00000557945 ANKRD55Q3KP44 614 aa16.77■□□□□ 0.27
CASC4-204ENST00000557945 CENPVQ7Z7K6 275 aaPredicted RBP16.77■□□□□ 0.27
CASC4-204ENST00000557945 LYG2Q86SG7 212 aa16.77■□□□□ 0.27
CASC4-204ENST00000557945 KLHDC1Q8N7A1 406 aa16.77■□□□□ 0.27
CASC4-204ENST00000557945 IL22RA2Q969J5 263 aa16.77■□□□□ 0.27
CASC4-204ENST00000557945 MDFIQ99750 246 aa16.77■□□□□ 0.27
CASC4-204ENST00000557945 ALX4Q9H161 411 aaPredicted RBP16.77■□□□□ 0.27
CASC4-204ENST00000557945 WSB1Q9Y6I7 421 aa16.77■□□□□ 0.27
CASC4-204ENST00000557945 IGF1P05019 195 aa16.76■□□□□ 0.27
CASC4-204ENST00000557945 IL6RP08887 468 aaPredicted RBP16.76■□□□□ 0.27
CASC4-204ENST00000557945 MAS1LP35410 378 aa16.76■□□□□ 0.27
CASC4-204ENST00000557945 PROK1P58294 105 aa16.76■□□□□ 0.27
CASC4-204ENST00000557945 SSBP2P81877 361 aaPredicted RBP16.76■□□□□ 0.27
CASC4-204ENST00000557945 IZUMO4Q1ZYL8 232 aa16.76■□□□□ 0.27
CASC4-204ENST00000557945 C10orf55Q5SWW7 151 aa16.76■□□□□ 0.27
CASC4-204ENST00000557945 STPG2Q8N412 459 aa16.76■□□□□ 0.27
CASC4-204ENST00000557945 FBXO7Q9Y3I1 522 aa16.76■□□□□ 0.27
CASC4-204ENST00000557945 FBN1P35555 2871 aaKnown RBP16.75■□□□□ 0.27
CASC4-204ENST00000557945 TNCP24821 2201 aa16.75■□□□□ 0.27
CASC4-204ENST00000557945 RBMXL2O75526 392 aaKnown RBP16.75■□□□□ 0.27
CASC4-204ENST00000557945 OPN1MWP04001 364 aa16.75■□□□□ 0.27
CASC4-204ENST00000557945 OPN1MW2P0DN77 364 aa16.75■□□□□ 0.27
CASC4-204ENST00000557945 OPN1MW3P0DN78 364 aa16.75■□□□□ 0.27
CASC4-204ENST00000557945 MYOD1P15172 320 aa16.75■□□□□ 0.27
CASC4-204ENST00000557945 SPNP16150 400 aa16.75■□□□□ 0.27
CASC4-204ENST00000557945 VDAC1P21796 283 aa16.75■□□□□ 0.27
CASC4-204ENST00000557945 COMPP49747 757 aaPredicted RBP16.75■□□□□ 0.27
CASC4-204ENST00000557945 OR2B8PP59922 312 aa16.75■□□□□ 0.27
CASC4-204ENST00000557945 ECSCRQ19T08 205 aa16.75■□□□□ 0.27
CASC4-204ENST00000557945 C12orf54Q6X4T0 127 aa16.75■□□□□ 0.27
CASC4-204ENST00000557945 CADM3Q8N126 398 aa16.75■□□□□ 0.27
CASC4-204ENST00000557945 SLC35G3Q8N808 338 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms