RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 RTBDNQ9BSG5 229 aaPredicted RBP11.24□□□□□ -0.61
USP3-205ENST00000557884 PLEKHA2Q9HB19 425 aa11.24□□□□□ -0.61
USP3-205ENST00000557884 COMMD9Q9P000 198 aa11.24□□□□□ -0.61
USP3-205ENST00000557884 C14orf166Q9Y224 244 aaKnown RBP11.24□□□□□ -0.61
USP3-205ENST00000557884 A0A1W2PN81 502 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 ADARB2-AS1A8MUL3 147 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 CREBL2O60519 120 aaPredicted RBP11.23□□□□□ -0.61
USP3-205ENST00000557884 ACTL6BO94805 426 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 KRASP01116 189 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 OPN1MWP04001 364 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 OPN1MW2P0DN77 364 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 OPN1MW3P0DN78 364 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 CHRNA7P36544 502 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 ERVK-16P61578 105 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 C2orf68Q2NKX9 166 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 NDUFA11Q86Y39 141 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 MMD2Q8IY49 270 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 COMMD1Q8N668 190 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 CCDC71LQ8N9Z2 235 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 SGMS2Q8NHU3 365 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 TMEM167AQ8TBQ9 72 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 CASTOR1Q8WTX7 329 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 PHB2Q99623 299 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 C5orf66Q9H5L9 145 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 TMEM140Q9NV12 185 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 ZNF580Q9UK33 172 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 VSIG4Q9Y279 399 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 TSSC4Q9Y5U2 329 aaPredicted RBP11.23□□□□□ -0.61
USP3-205ENST00000557884 NUBP2Q9Y5Y2 271 aa11.23□□□□□ -0.61
USP3-205ENST00000557884 TRAV3A0A0B4J244 114 aa11.22□□□□□ -0.61
USP3-205ENST00000557884 IGHG4P01861 327 aa11.22□□□□□ -0.61
USP3-205ENST00000557884 RPLP1P05386 114 aaKnown RBP11.22□□□□□ -0.61
USP3-205ENST00000557884 SERPINE2P07093 398 aa11.22□□□□□ -0.61
USP3-205ENST00000557884 PF4V1P10720 104 aa11.22□□□□□ -0.61
USP3-205ENST00000557884 IL7P13232 177 aa11.22□□□□□ -0.61
USP3-205ENST00000557884 MYOD1P15172 320 aa11.22□□□□□ -0.61
USP3-205ENST00000557884 G6PCP35575 357 aa11.22□□□□□ -0.61
USP3-205ENST00000557884 CRIP2P52943 208 aaPredicted RBP11.22□□□□□ -0.61
USP3-205ENST00000557884 TMEM267Q0VDI3 215 aaPredicted RBP11.22□□□□□ -0.61
USP3-205ENST00000557884 FOXE3Q13461 319 aa11.22□□□□□ -0.61
USP3-205ENST00000557884 SURF2Q15527 256 aaPredicted RBP11.22□□□□□ -0.61
USP3-205ENST00000557884 POU2AF1Q16633 256 aa11.22□□□□□ -0.61
USP3-205ENST00000557884 SP6Q3SY56 376 aa11.22□□□□□ -0.61
USP3-205ENST00000557884 C19orf54Q5BKX5 351 aa11.22□□□□□ -0.61
USP3-205ENST00000557884 CXorf66Q5JRM2 361 aaPredicted RBP11.22□□□□□ -0.61
USP3-205ENST00000557884 C18orf65Q6ZTR6 163 aa11.22□□□□□ -0.61
USP3-205ENST00000557884 TCTEX1D1Q8N7M0 179 aa11.22□□□□□ -0.61
USP3-205ENST00000557884 ADAD2Q8NCV1 583 aaKnown RBP11.22□□□□□ -0.61
USP3-205ENST00000557884 FAM110DQ8TAY7 271 aaPredicted RBP11.22□□□□□ -0.61
USP3-205ENST00000557884 SRSF12Q8WXF0 261 aaKnown RBP11.22□□□□□ -0.61
USP3-205ENST00000557884 TP53RKQ96S44 253 aa11.22□□□□□ -0.61
USP3-205ENST00000557884 AIFM2Q9BRQ8 373 aa11.22□□□□□ -0.61
USP3-205ENST00000557884 KLK15Q9H2R5 256 aa11.22□□□□□ -0.61
USP3-205ENST00000557884 GPR132Q9UNW8 380 aa11.22□□□□□ -0.61
USP3-205ENST00000557884 FOXA2Q9Y261 457 aaPredicted RBP11.22□□□□□ -0.61
USP3-205ENST00000557884 TEX13DA0A0J9YY54 714 aaPredicted RBP11.21□□□□□ -0.61
USP3-205ENST00000557884 C3orf85A0A1B0GTC6 90 aa11.21□□□□□ -0.61
USP3-205ENST00000557884 MSGN1A6NI15 193 aa11.21□□□□□ -0.61
USP3-205ENST00000557884 MARCH11A6NNE9 402 aa11.21□□□□□ -0.61
USP3-205ENST00000557884 H0Y980 276 aa11.21□□□□□ -0.61
USP3-205ENST00000557884 UPK2O00526 184 aa11.21□□□□□ -0.61
USP3-205ENST00000557884 SOX15O60248 233 aa11.21□□□□□ -0.61
USP3-205ENST00000557884 IGKV1-39P01597 117 aa11.21□□□□□ -0.61
USP3-205ENST00000557884 IGKV1D-39P04432 117 aa11.21□□□□□ -0.61
USP3-205ENST00000557884 ELANEP08246 267 aa11.21□□□□□ -0.61
USP3-205ENST00000557884 PPIFP30405 207 aaKnown RBP11.21□□□□□ -0.61
USP3-205ENST00000557884 RPL23AP62750 156 aaKnown RBP11.21□□□□□ -0.61
USP3-205ENST00000557884 RPL8P62917 257 aaKnown RBP11.21□□□□□ -0.61
USP3-205ENST00000557884 AKIRIN2Q53H80 203 aa11.21□□□□□ -0.61
USP3-205ENST00000557884 MINDY2Q8NBR6 621 aa11.21□□□□□ -0.61
USP3-205ENST00000557884 OR5T1Q8NG75 326 aa11.21□□□□□ -0.61
USP3-205ENST00000557884 NAA60Q9H7X0 242 aa11.21□□□□□ -0.61
USP3-205ENST00000557884 BET1LQ9NYM9 111 aa11.21□□□□□ -0.61
USP3-205ENST00000557884 NUDT19A8MXV4 375 aa11.2□□□□□ -0.62
USP3-205ENST00000557884 IGLV1-40P01703 118 aa11.2□□□□□ -0.62
USP3-205ENST00000557884 HLA-GP17693 338 aa11.2□□□□□ -0.62
USP3-205ENST00000557884 PSMB8P28062 276 aa11.2□□□□□ -0.62
USP3-205ENST00000557884 CCR6P51684 374 aa11.2□□□□□ -0.62
USP3-205ENST00000557884 TRIM16LQ309B1 348 aa11.2□□□□□ -0.62
USP3-205ENST00000557884 ASPHD1Q5U4P2 390 aa11.2□□□□□ -0.62
USP3-205ENST00000557884 TMEM65Q6PI78 240 aa11.2□□□□□ -0.62
USP3-205ENST00000557884 LINC00299Q6ZSB3 139 aa11.2□□□□□ -0.62
USP3-205ENST00000557884 TMED4Q7Z7H5 227 aa11.2□□□□□ -0.62
USP3-205ENST00000557884 OR4A5Q8NH83 315 aa11.2□□□□□ -0.62
USP3-205ENST00000557884 MS4A10Q96PG2 267 aa11.2□□□□□ -0.62
USP3-205ENST00000557884 SCGB3A2Q96PL1 93 aa11.2□□□□□ -0.62
USP3-205ENST00000557884 FYTTD1Q96QD9 318 aaKnown RBP11.2□□□□□ -0.62
USP3-205ENST00000557884 FAM212BQ9NTI7 297 aaPredicted RBP11.2□□□□□ -0.62
USP3-205ENST00000557884 NSG2Q9Y328 171 aa11.2□□□□□ -0.62
USP3-205ENST00000557884 HMX3A6NHT5 357 aa11.19□□□□□ -0.62
USP3-205ENST00000557884 CRYM-AS1A6NIL9 109 aa11.19□□□□□ -0.62
USP3-205ENST00000557884 E7EUB6 86 aa11.19□□□□□ -0.62
USP3-205ENST00000557884 OR5AC1P0C628 307 aa11.19□□□□□ -0.62
USP3-205ENST00000557884 OR9G9P0C7N8 305 aa11.19□□□□□ -0.62
USP3-205ENST00000557884 AKR1C4P17516 323 aa11.19□□□□□ -0.62
USP3-205ENST00000557884 RPL27AP46776 148 aaKnown RBP11.19□□□□□ -0.62
USP3-205ENST00000557884 OR2B8PP59922 312 aa11.19□□□□□ -0.62
USP3-205ENST00000557884 PRR31Q5SQ13 230 aa11.19□□□□□ -0.62
USP3-205ENST00000557884 RNF152Q8N8N0 203 aa11.19□□□□□ -0.62
USP3-205ENST00000557884 KLHL30-AS1Q8NEE0 82 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms