RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 KCNIP1Q9NZI2 227 aa3.36□□□□□ -1.87
SCFD1-223ENST00000557076 UBQLN2Q9UHD9 624 aa3.36□□□□□ -1.87
SCFD1-223ENST00000557076 SELENOKQ9Y6D0 94 aa3.36□□□□□ -1.87
SCFD1-223ENST00000557076 RPS10-NUDT3A0A1W2PQS6 291 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 SC5DO75845 299 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 S1PR2O95136 353 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 IGLV2-23P01705 113 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 MAS1P04201 325 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 CLEC3BP05452 202 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 GTF2F2P13984 249 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 ATP6V1B2P21281 511 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 NPY1RP25929 384 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 PSMB6P28072 239 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 RFX2P48378 723 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 XGP55808 180 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 RIPK1Q13546 671 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 GNMTQ14749 295 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 KLK9Q2XQG4 91 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 C12orf74Q32Q52 190 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 RPL39P5Q59GN2 51 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 Q5VSD8 79 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 LIPKQ5VXJ0 399 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 NXNL2Q5VZ03 156 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 TMEM236Q5W0B7 351 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 DMKNQ6E0U4 476 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-223ENST00000557076 MZT2BQ6NZ67 158 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 GLDNQ6ZMI3 551 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-223ENST00000557076 SLC25A42Q86VD7 318 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 PDPNQ86YL7 162 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 UBE2DNLQ8IWF7 75 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 C6orf223Q8N319 242 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 ZNF383Q8NA42 475 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 OR51A4Q8NGJ6 313 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 OR13C3Q8NGS6 347 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 OR10K1Q8NGX5 313 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 OR5B3Q8NH48 314 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 CD300LFQ8TDQ1 290 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 NEK7Q8TDX7 302 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 TNFAIP8L1Q8WVP5 186 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 FAM46BQ96A09 425 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 MAGIXQ9H6Y5 334 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 ZNF556Q9HAH1 456 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 KLK9Q9UKQ9 250 aa3.35□□□□□ -1.87
SCFD1-223ENST00000557076 IGHV4-28A0A0C4DH34 117 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 OR4C46A6NHA9 309 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 OR4C45A6NMZ5 311 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 SRRM4A7MD48 611 aaKnown RBP3.34□□□□□ -1.87
SCFD1-223ENST00000557076 ZNF705EA8MWA4 302 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-223ENST00000557076 GABRPO00591 440 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 PRKYO43930 277 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 MRPS14O60783 128 aaKnown RBP3.34□□□□□ -1.87
SCFD1-223ENST00000557076 CDRT1O95170 752 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 CA1P00915 261 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-223ENST00000557076 PRH1P02810 166 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 ANXA8P13928 327 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 RAB3AP20336 220 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 FUT3P21217 361 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 ARL3P36405 182 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 GPR176Q14439 515 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 TMEM41BQ5BJD5 291 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 UNQ9165/PRO28630Q6UXU0 137 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 APRG1Q8IVJ8 170 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 TEX45Q8NA69 505 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 TMEM163Q8TC26 289 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 CMTM5Q96DZ9 223 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 GPER1Q99527 375 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 PHB2Q99623 299 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 SPIN2AQ99865 258 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 SPIN2BQ9BPZ2 258 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 CHRDL1Q9BU40 450 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 WARS2Q9UGM6 360 aaKnown RBP3.34□□□□□ -1.87
SCFD1-223ENST00000557076 GNG8Q9UK08 70 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 UFC1Q9Y3C8 167 aa3.34□□□□□ -1.87
SCFD1-223ENST00000557076 A0A0A0MQY5 61 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 TRBV7-1A0A0A6YYK4 115 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 NBDYA0A0U1RRE5 68 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 DPPA5A6NC42 116 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 TEX22C9J3V5 150 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 CCDC22O60826 627 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 OR2J3O76001 311 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 GIG44P09565 113 aaPredicted RBP3.33□□□□□ -1.88
SCFD1-223ENST00000557076 GSTT2P0CG29 244 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 GSTT2BP0CG30 244 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 APELAP0DMC3 54 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 ATP6V1E1P36543 226 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 KRTAP10-5P60370 271 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 TMED1Q13445 227 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 PTGES3Q15185 160 aaKnown RBP3.33□□□□□ -1.88
SCFD1-223ENST00000557076 PRSS8Q16651 343 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 FAM98BQ52LJ0 330 aaKnown RBP3.33□□□□□ -1.88
SCFD1-223ENST00000557076 RAB12Q6IQ22 244 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 MORN3Q6PF18 240 aaPredicted RBP3.33□□□□□ -1.88
SCFD1-223ENST00000557076 CLEC19AQ6UXS0 136 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 FAM220AQ7Z4H9 259 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 C5orf24Q7Z6I8 188 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 GID4Q8IVV7 300 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 DRAXINQ8NBI3 349 aaPredicted RBP3.33□□□□□ -1.88
SCFD1-223ENST00000557076 OR10H4Q8NGA5 316 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 PTX4Q96A99 478 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 ABHD14BQ96IU4 210 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms