RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 Q6ZWC4 215 aa9.45□□□□□ -0.9
SRP54-213ENST00000556994 OR10G8Q8NGN5 311 aa9.45□□□□□ -0.9
SRP54-213ENST00000556994 RAB1CQ92928 201 aa9.45□□□□□ -0.9
SRP54-213ENST00000556994 GGTLC1Q9BX51 225 aa9.45□□□□□ -0.9
SRP54-213ENST00000556994 SEPSECSQ9HD40 501 aaKnown RBP9.45□□□□□ -0.9
SRP54-213ENST00000556994 GPR179Q6PRD1 2367 aa9.45□□□□□ -0.9
SRP54-213ENST00000556994 TMEM210A6NLX4 147 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 K7EN84 100 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 STAG3L2P0CL84 134 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 STAG3L3P0CL85 134 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 TDGF1P13385 188 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 ACP1P24666 158 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 LINC00310P59036 64 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 GABRA6Q16445 453 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 ATP1A1-AS1Q5TC04 95 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 CD177Q8N6Q3 437 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 ZCCHC14Q8WYQ9 949 aaKnown RBP9.44□□□□□ -0.9
SRP54-213ENST00000556994 RYDENQ9NUL5 291 aaKnown RBP9.44□□□□□ -0.9
SRP54-213ENST00000556994 TRGV5A0A0B4J1U4 118 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 KIR2DL5BA0A0G2JN68 375 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 KIR2DL5BA0A0G2JPC4 375 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 KLRC4-KLRK1H3BQV0 150 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 M0R1X1 148 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 LAMTOR5O43504 91 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 SERF1AO75920 110 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 HPRT1P00492 218 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 CDKN1AP38936 164 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 OPRK1P41145 380 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 TDGF1P3P51864 188 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 RPL31P62899 125 aaKnown RBP9.44□□□□□ -0.9
SRP54-213ENST00000556994 OR5I1Q13606 314 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 KIR2DL5AQ8N109 375 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 C1orf159Q96HA4 380 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 GNG12Q9UBI6 72 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 NCOR1O75376 2440 aa9.44□□□□□ -0.9
SRP54-213ENST00000556994 COL27A1Q8IZC6 1860 aaPredicted RBP9.43□□□□□ -0.9
SRP54-213ENST00000556994 A6NNC1 897 aa9.43□□□□□ -0.9
SRP54-213ENST00000556994 C15orf65H3BRN8 121 aa9.43□□□□□ -0.9
SRP54-213ENST00000556994 SPINT2O43291 252 aa9.43□□□□□ -0.9
SRP54-213ENST00000556994 TIMM8AO60220 97 aaPredicted RBP9.43□□□□□ -0.9
SRP54-213ENST00000556994 SPINK4O60575 86 aa9.43□□□□□ -0.9
SRP54-213ENST00000556994 WISP2O76076 250 aa9.43□□□□□ -0.9
SRP54-213ENST00000556994 CXorf1O96002 111 aa9.43□□□□□ -0.9
SRP54-213ENST00000556994 ZNF25P17030 456 aaPredicted RBP9.43□□□□□ -0.9
SRP54-213ENST00000556994 KRTCAP3Q53RY4 240 aa9.43□□□□□ -0.9
SRP54-213ENST00000556994 UTF1Q5T230 341 aa9.43□□□□□ -0.9
SRP54-213ENST00000556994 MRPL18Q9H0U6 180 aaKnown RBP9.43□□□□□ -0.9
SRP54-213ENST00000556994 TMEM106BQ9NUM4 274 aa9.43□□□□□ -0.9
SRP54-213ENST00000556994 KLF13Q9Y2Y9 288 aaPredicted RBP9.43□□□□□ -0.9
SRP54-213ENST00000556994 SMG1Q96Q15 3661 aaKnown RBP9.43□□□□□ -0.9
SRP54-213ENST00000556994 GFRA3O60609 400 aa9.43□□□□□ -0.9
SRP54-213ENST00000556994 RAB4AP20338 218 aa9.43□□□□□ -0.9
SRP54-213ENST00000556994 VDAC2P45880 294 aaPredicted RBP9.43□□□□□ -0.9
SRP54-213ENST00000556994 IER3P46695 156 aa9.43□□□□□ -0.9
SRP54-213ENST00000556994 ZNF134P52741 427 aa9.43□□□□□ -0.9
SRP54-213ENST00000556994 YPEL3P61236 119 aaPredicted RBP9.43□□□□□ -0.9
SRP54-213ENST00000556994 PEAR1Q5VY43 1037 aaPredicted RBP9.43□□□□□ -0.9
SRP54-213ENST00000556994 TCTEX1D1Q8N7M0 179 aa9.43□□□□□ -0.9
SRP54-213ENST00000556994 LEAP2Q969E1 77 aa9.43□□□□□ -0.9
SRP54-213ENST00000556994 HSPB9Q9BQS6 159 aa9.43□□□□□ -0.9
SRP54-213ENST00000556994 CXXC4Q9H2H0 198 aa9.43□□□□□ -0.9
SRP54-213ENST00000556994 HEATR1Q9H583 2144 aaKnown RBP9.43□□□□□ -0.9
SRP54-213ENST00000556994 PARD6AQ9NPB6 346 aa9.43□□□□□ -0.9
SRP54-213ENST00000556994 PAM16Q9Y3D7 125 aa9.43□□□□□ -0.9
SRP54-213ENST00000556994 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.42□□□□□ -0.9
SRP54-213ENST00000556994 PRSS46E5RG02 174 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 ACTL6BO94805 426 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 IL6RP08887 468 aaPredicted RBP9.42□□□□□ -0.9
SRP54-213ENST00000556994 CRISP2P16562 243 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 EFNB3Q15768 340 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 TMEM249Q2WGJ8 235 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 ZNF718Q3SXZ3 478 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 C1orf229Q6ZS94 237 aaPredicted RBP9.42□□□□□ -0.9
SRP54-213ENST00000556994 CNEP1R1Q8N9A8 125 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 MDS2Q8NDY4 140 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 OR1L6Q8NGR2 347 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 VN1R17PQ8TDU5 208 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 ZPBPQ9BS86 351 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 BOD1L1Q8NFC6 3051 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 J3QW42 95 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 FCN1O00602 326 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 MYOD1P15172 320 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 GCHFRP30047 84 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 RELBQ01201 579 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 MORN2Q502X0 79 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 ARSJQ5FYB0 599 aaPredicted RBP9.42□□□□□ -0.9
SRP54-213ENST00000556994 BAGE3Q86Y29 109 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 BAGE2Q86Y30 109 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 OR4P4Q8NGL7 312 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 LRRC29Q8WV35 223 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 BTF3L4Q96K17 158 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 FAM103A1Q9BTL3 118 aaKnown RBP9.42□□□□□ -0.9
SRP54-213ENST00000556994 IL36BQ9NZH7 164 aa9.42□□□□□ -0.9
SRP54-213ENST00000556994 IGHV3OR15-7A0A075B7D8 119 aa9.41□□□□□ -0.9
SRP54-213ENST00000556994 YPEL1O60688 119 aa9.41□□□□□ -0.9
SRP54-213ENST00000556994 MPDU1O75352 247 aa9.41□□□□□ -0.9
SRP54-213ENST00000556994 CGAP01215 116 aa9.41□□□□□ -0.9
SRP54-213ENST00000556994 PRDX2P32119 198 aa9.41□□□□□ -0.9
SRP54-213ENST00000556994 TPPP2P59282 170 aa9.41□□□□□ -0.9
SRP54-213ENST00000556994 RPP30P78346 268 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms