RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 PLSCR3Q9NRY6 295 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 TMEM140Q9NV12 185 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 BET1LQ9NYM9 111 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 PRR13Q9NZ81 148 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 TMED3Q9Y3Q3 217 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 F8P00451 2351 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 NAV3Q8IVL0 2385 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 C7orf66A4D0T2 115 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 GPR137BO60478 399 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 SNAPC5O75971 98 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 KBTBD11O94819 623 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 IFNA21P01568 189 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 CRYBA1P05813 215 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 CRYGBP07316 175 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 RNASE1P07998 156 aaKnown RBP7.75□□□□□ -1.17
TMEM260-213ENST00000556929 SAA1P0DJI8 122 aaPredicted RBP7.75□□□□□ -1.17
TMEM260-213ENST00000556929 RPL15P61313 204 aaKnown RBP7.75□□□□□ -1.17
TMEM260-213ENST00000556929 UBA52P62987 128 aaKnown RBP7.75□□□□□ -1.17
TMEM260-213ENST00000556929 RELBQ01201 579 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 C5orf64Q2M2E5 130 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 FBLN7Q53RD9 439 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 LIN54Q6MZP7 749 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 LYZL2Q7Z4W2 148 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 PPP1R27Q86WC6 154 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 MMD2Q8IY49 270 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 VKORC1L1Q8N0U8 176 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 PUSL1Q8N0Z8 303 aaKnown RBP7.75□□□□□ -1.17
TMEM260-213ENST00000556929 FAM71E2Q8N5Q1 922 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 C5orf56Q8N8D9 126 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 Q8N9W7 124 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 UXS1Q8NBZ7 420 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 LHFPL5Q8TAF8 219 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 TMEM167AQ8TBQ9 72 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 DUX5Q96PT3 197 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 RANBP3Q9H6Z4 567 aaPredicted RBP7.75□□□□□ -1.17
TMEM260-213ENST00000556929 ESM1Q9NQ30 184 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 SIGLEC9Q9Y336 463 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 MMP24Q9Y5R2 645 aa7.75□□□□□ -1.17
TMEM260-213ENST00000556929 TLN2Q9Y4G6 2542 aa7.74□□□□□ -1.17
TMEM260-213ENST00000556929 UPK2O00526 184 aa7.74□□□□□ -1.17
TMEM260-213ENST00000556929 SSNA1O43805 119 aa7.74□□□□□ -1.17
TMEM260-213ENST00000556929 CHST1O43916 411 aa7.74□□□□□ -1.17
TMEM260-213ENST00000556929 RBMXL2O75526 392 aaKnown RBP7.74□□□□□ -1.17
TMEM260-213ENST00000556929 ACTL6BO94805 426 aa7.74□□□□□ -1.17
TMEM260-213ENST00000556929 IGKV1-5P01602 117 aa7.74□□□□□ -1.17
TMEM260-213ENST00000556929 HLA-DRB1P01911 266 aa7.74□□□□□ -1.17
TMEM260-213ENST00000556929 HOXB5P09067 269 aa7.74□□□□□ -1.17
TMEM260-213ENST00000556929 MAS1LP35410 378 aa7.74□□□□□ -1.17
TMEM260-213ENST00000556929 C9orf152Q5JTZ5 239 aa7.74□□□□□ -1.17
TMEM260-213ENST00000556929 OR4A16Q8NH70 328 aa7.74□□□□□ -1.17
TMEM260-213ENST00000556929 CLCC1Q96S66 551 aa7.74□□□□□ -1.17
TMEM260-213ENST00000556929 SPIN2AQ99865 258 aa7.74□□□□□ -1.17
TMEM260-213ENST00000556929 SPIN2BQ9BPZ2 258 aa7.74□□□□□ -1.17
TMEM260-213ENST00000556929 NPFFR1Q9GZQ6 430 aa7.74□□□□□ -1.17
TMEM260-213ENST00000556929 OR51J1Q9H342 316 aa7.74□□□□□ -1.17
TMEM260-213ENST00000556929 FKBP11Q9NYL4 201 aa7.74□□□□□ -1.17
TMEM260-213ENST00000556929 ALG5Q9Y673 324 aa7.74□□□□□ -1.17
TMEM260-213ENST00000556929 MXRA5Q9NR99 2828 aa7.74□□□□□ -1.17
TMEM260-213ENST00000556929 DBX1A6NMT0 343 aa7.73□□□□□ -1.17
TMEM260-213ENST00000556929 KCNAB3O43448 404 aa7.73□□□□□ -1.17
TMEM260-213ENST00000556929 CA2P00918 260 aa7.73□□□□□ -1.17
TMEM260-213ENST00000556929 IL6RP08887 468 aaPredicted RBP7.73□□□□□ -1.17
TMEM260-213ENST00000556929 FGF2P09038 288 aa7.73□□□□□ -1.17
TMEM260-213ENST00000556929 OR9G9P0C7N8 305 aa7.73□□□□□ -1.17
TMEM260-213ENST00000556929 SULT1A3P0DMM9 295 aa7.73□□□□□ -1.17
TMEM260-213ENST00000556929 SULT1A4P0DMN0 295 aa7.73□□□□□ -1.17
TMEM260-213ENST00000556929 RPL8P62917 257 aaKnown RBP7.73□□□□□ -1.17
TMEM260-213ENST00000556929 TNXAQ16473 311 aa7.73□□□□□ -1.17
TMEM260-213ENST00000556929 PRSS8Q16651 343 aa7.73□□□□□ -1.17
TMEM260-213ENST00000556929 ARSJQ5FYB0 599 aaPredicted RBP7.73□□□□□ -1.17
TMEM260-213ENST00000556929 THOC7Q6I9Y2 204 aaKnown RBP7.73□□□□□ -1.17
TMEM260-213ENST00000556929 GPR146Q96CH1 333 aa7.73□□□□□ -1.17
TMEM260-213ENST00000556929 PDCD10Q9BUL8 212 aa7.73□□□□□ -1.17
TMEM260-213ENST00000556929 PRSS22Q9GZN4 317 aa7.73□□□□□ -1.17
TMEM260-213ENST00000556929 COMMD5Q9GZQ3 224 aa7.73□□□□□ -1.17
TMEM260-213ENST00000556929 ZNF430Q9H8G1 570 aaPredicted RBP7.73□□□□□ -1.17
TMEM260-213ENST00000556929 PRNDQ9UKY0 176 aa7.73□□□□□ -1.17
TMEM260-213ENST00000556929 A0A0B4J293 547 aa7.72□□□□□ -1.17
TMEM260-213ENST00000556929 A0A1B0GU03 582 aa7.72□□□□□ -1.17
TMEM260-213ENST00000556929 FAM181BA6NEQ2 426 aa7.72□□□□□ -1.17
TMEM260-213ENST00000556929 C15orf61A6NNL5 157 aa7.72□□□□□ -1.17
TMEM260-213ENST00000556929 ADAP1O75689 374 aa7.72□□□□□ -1.17
TMEM260-213ENST00000556929 CNIH1O95406 144 aa7.72□□□□□ -1.17
TMEM260-213ENST00000556929 P0C879 139 aa7.72□□□□□ -1.17
TMEM260-213ENST00000556929 SLC25A6P12236 298 aa7.72□□□□□ -1.17
TMEM260-213ENST00000556929 SMCO1Q147U7 214 aa7.72□□□□□ -1.17
TMEM260-213ENST00000556929 NMSQ5H8A3 153 aa7.72□□□□□ -1.17
TMEM260-213ENST00000556929 GGNBP1Q5YKI7 109 aa7.72□□□□□ -1.17
TMEM260-213ENST00000556929 GSG1LQ6UXU4 331 aa7.72□□□□□ -1.17
TMEM260-213ENST00000556929 ZNF562Q6V9R5 426 aa7.72□□□□□ -1.17
TMEM260-213ENST00000556929 OR1S1Q8NH92 325 aa7.72□□□□□ -1.17
TMEM260-213ENST00000556929 MED28Q9H204 178 aa7.72□□□□□ -1.17
TMEM260-213ENST00000556929 TPSG1Q9NRR2 321 aa7.72□□□□□ -1.17
TMEM260-213ENST00000556929 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.72□□□□□ -1.17
TMEM260-213ENST00000556929 COA4Q9NYJ1 87 aa7.72□□□□□ -1.17
TMEM260-213ENST00000556929 CACNG5Q9UF02 275 aa7.72□□□□□ -1.17
TMEM260-213ENST00000556929 CACFD1Q9UGQ2 172 aa7.72□□□□□ -1.17
TMEM260-213ENST00000556929 TET2Q6N021 2002 aaPredicted RBP7.72□□□□□ -1.17
TMEM260-213ENST00000556929 SONP18583 2426 aaKnown RBP7.71□□□□□ -1.17
TMEM260-213ENST00000556929 NSD1Q96L73 2696 aaPredicted RBP7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms