RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 TRBV24-1A0A075B6N3 115 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 SAA2-SAA4A0A096LPE2 208 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 TRGV10A0A0A0MS01 117 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 TGIF2-C20orf24A0A0A6YYL0 155 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 KBTBD11-OT1A0A1B0GTJ5 212 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 SMCO3A2RU48 225 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 NKX6-3A6NJ46 265 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 PCP4L1A6NKN8 68 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 A8MXE2 369 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 K7EM74 188 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 TM4SF5O14894 197 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 CYB5BO43169 146 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 YIF1AO95070 293 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 IFNA10P01566 189 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 S100A9P06702 114 aaKnown RBP4.44□□□□□ -1.7
GPHN-213ENST00000556501 SAA2P0DJI9 122 aaPredicted RBP4.44□□□□□ -1.7
GPHN-213ENST00000556501 HOXA5P20719 270 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 CD40P25942 277 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 CD1BP29016 333 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 OPRK1P41145 380 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 TDGF1P3P51864 188 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 ZNF134P52741 427 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 TMPRSS3P57727 454 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 RPS16P62249 146 aaKnown RBP4.44□□□□□ -1.7
GPHN-213ENST00000556501 SUMO1P63165 101 aaKnown RBP4.44□□□□□ -1.7
GPHN-213ENST00000556501 TLE1Q04724 770 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 TMEM241Q24JQ0 296 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 CT45A1Q5HYN5 189 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 FAM201AQ5SY85 155 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 UTF1Q5T230 341 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 TEX36Q5VZQ5 186 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 DUX4L9Q6RFH8 374 aaPredicted RBP4.44□□□□□ -1.7
GPHN-213ENST00000556501 ZNF788Q6ZQV5 615 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 SSX9Q7RTT3 188 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 CT45A3Q8NHU0 189 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 TMEM170AQ8WVE7 144 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 CORO2AQ92828 525 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 FAM210BQ96KR6 192 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 SSX3Q99909 188 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 PARLQ9H300 379 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 HEYLQ9NQ87 328 aaPredicted RBP4.44□□□□□ -1.7
GPHN-213ENST00000556501 TMEM14BQ9NUH8 114 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 IDI2-AS1Q9NZ38 188 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 RPUSD1Q9UJJ7 312 aaKnown RBP4.44□□□□□ -1.7
GPHN-213ENST00000556501 URGCP-MRPS24S4R325 110 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 CACNA1DQ01668 2161 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 DOCK11Q5JSL3 2073 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 CADP27708 2225 aa4.44□□□□□ -1.7
GPHN-213ENST00000556501 DYSFO75923 2080 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 ELOA3CA0A087WX78 387 aaPredicted RBP4.43□□□□□ -1.7
GPHN-213ENST00000556501 TRAV3A0A0B4J244 114 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 FNDC10F2Z333 226 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 F6UZH7 168 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 MKRN2OSH3BPM6 223 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 RRHO14718 337 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 PHOX2AO14813 284 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 HMGB3O15347 200 aaKnown RBP4.43□□□□□ -1.7
GPHN-213ENST00000556501 HIST1H2BKO60814 126 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 PAGE4O60829 102 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 CLN5O75503 358 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 VENTXO95231 258 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 HIST1H2BJP06899 126 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 BMP5P22003 454 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 HIST1H2BOP23527 126 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 NPY1RP25929 384 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 HIST1H2BBP33778 126 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 PLA2G5P39877 138 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 NBL1P41271 181 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 SMCPP49901 116 aaPredicted RBP4.43□□□□□ -1.7
GPHN-213ENST00000556501 HIST1H2BDP58876 126 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 HIST1H2BCP62807 126 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 RPL23P62829 140 aaKnown RBP4.43□□□□□ -1.7
GPHN-213ENST00000556501 CTAG1AP78358 180 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 MRPS11P82912 194 aaKnown RBP4.43□□□□□ -1.7
GPHN-213ENST00000556501 FAM27E3Q08E93 113 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 HNF4GQ14541 408 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 ADIRFQ15847 76 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 HIST2H2BEQ16778 126 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 BSXQ3C1V8 233 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.43□□□□□ -1.7
GPHN-213ENST00000556501 OR4A47Q6IF82 309 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 TMEM108Q6UXF1 575 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 TREML4Q6UXN2 200 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 C1orf229Q6ZS94 237 aaPredicted RBP4.43□□□□□ -1.7
GPHN-213ENST00000556501 SLC25A48Q6ZT89 311 aaKnown RBP4.43□□□□□ -1.7
GPHN-213ENST00000556501 SSX8Q7RTT4 187 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 SLC16A13Q7RTY0 426 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 C16orf82Q7Z2V1 217 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 TGIF2LYQ8IUE0 185 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 VKORC1L1Q8N0U8 176 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 FAM216BQ8N7L0 139 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 ZNF383Q8NA42 475 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 OR10A7Q8NGE5 316 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 OR4F5Q8NH21 305 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 GATAD1Q8WUU5 269 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 ZCCHC14Q8WYQ9 949 aaKnown RBP4.43□□□□□ -1.7
GPHN-213ENST00000556501 HIST1H2BHQ93079 126 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 LEAP2Q969E1 77 aa4.43□□□□□ -1.7
GPHN-213ENST00000556501 RPUSD4Q96CM3 377 aaKnown RBP4.43□□□□□ -1.7
GPHN-213ENST00000556501 OR4F4Q96R69 305 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms