RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 TRBV6-7A0A0A0MS04 114 aa7.57□□□□□ -1.2
SCFD1-220ENST00000556486 C13orf42A0A1B0GVH6 325 aa7.57□□□□□ -1.2
SCFD1-220ENST00000556486 ERICH4A6NGS2 130 aa7.57□□□□□ -1.2
SCFD1-220ENST00000556486 ARL6IP5O75915 188 aa7.57□□□□□ -1.2
SCFD1-220ENST00000556486 OR2A4O95047 310 aa7.57□□□□□ -1.2
SCFD1-220ENST00000556486 PSMA1P25786 263 aaKnown RBP7.57□□□□□ -1.2
SCFD1-220ENST00000556486 LINC00205P59089 165 aa7.57□□□□□ -1.2
SCFD1-220ENST00000556486 PJVKQ0ZLH3 352 aa7.57□□□□□ -1.2
SCFD1-220ENST00000556486 RCN1Q15293 331 aa7.57□□□□□ -1.2
SCFD1-220ENST00000556486 TRAM1Q15629 374 aa7.57□□□□□ -1.2
SCFD1-220ENST00000556486 MRGPRG-AS1Q2M3A8 158 aa7.57□□□□□ -1.2
SCFD1-220ENST00000556486 PLAC9Q5JTB6 97 aa7.57□□□□□ -1.2
SCFD1-220ENST00000556486 LINC00322Q6ZN03 302 aaPredicted RBP7.57□□□□□ -1.2
SCFD1-220ENST00000556486 TMEM91Q6ZNR0 172 aa7.57□□□□□ -1.2
SCFD1-220ENST00000556486 Q8N402 240 aa7.57□□□□□ -1.2
SCFD1-220ENST00000556486 OR56B1Q8NGI3 324 aa7.57□□□□□ -1.2
SCFD1-220ENST00000556486 OR2K2Q8NGT1 345 aa7.57□□□□□ -1.2
SCFD1-220ENST00000556486 IL17DQ8TAD2 202 aa7.57□□□□□ -1.2
SCFD1-220ENST00000556486 SETD6Q8TBK2 473 aa7.57□□□□□ -1.2
SCFD1-220ENST00000556486 ARHGAP5-AS1Q96IT6 56 aa7.57□□□□□ -1.2
SCFD1-220ENST00000556486 CLCC1Q96S66 551 aa7.57□□□□□ -1.2
SCFD1-220ENST00000556486 PECRQ9BY49 303 aa7.57□□□□□ -1.2
SCFD1-220ENST00000556486 SLC35D1Q9NTN3 355 aa7.57□□□□□ -1.2
SCFD1-220ENST00000556486 PEF1Q9UBV8 284 aaKnown RBP7.57□□□□□ -1.2
SCFD1-220ENST00000556486 KRTAP23-1A1A580 65 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 IZUMO1RA6ND01 250 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 M0R1X1 148 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 FABP7O15540 132 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 RRASP10301 218 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 PSMD7P51665 324 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 P2RY14Q15391 338 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 RAB11BQ15907 218 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 LIPKQ5VXJ0 399 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 LCN12Q6JVE5 192 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 Q6ZS49 121 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 LAX1Q8IWV1 398 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 ADAD2Q8NCV1 583 aaKnown RBP7.56□□□□□ -1.2
SCFD1-220ENST00000556486 OR5T1Q8NG75 326 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 UFD1Q92890 307 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 HARBI1Q96MB7 349 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 CMSS1Q9BQ75 279 aaKnown RBP7.56□□□□□ -1.2
SCFD1-220ENST00000556486 ST6GALNAC5Q9BVH7 336 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 WFDC10AQ9H1F0 79 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 DUSP21Q9H596 190 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 PLGRKTQ9HBL7 147 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 SDHAF2Q9NX18 166 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 KCNK7Q9Y2U2 307 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 CEPT1Q9Y6K0 416 aa7.56□□□□□ -1.2
SCFD1-220ENST00000556486 TRBV9A0A0B4J1U6 114 aa7.55□□□□□ -1.2
SCFD1-220ENST00000556486 CXorf65A6NEN9 183 aa7.55□□□□□ -1.2
SCFD1-220ENST00000556486 DBX1A6NMT0 343 aa7.55□□□□□ -1.2
SCFD1-220ENST00000556486 SRRM4A7MD48 611 aaKnown RBP7.55□□□□□ -1.2
SCFD1-220ENST00000556486 AIREO43918 545 aa7.55□□□□□ -1.2
SCFD1-220ENST00000556486 CNIH1O95406 144 aa7.55□□□□□ -1.2
SCFD1-220ENST00000556486 CSN3P07498 182 aa7.55□□□□□ -1.2
SCFD1-220ENST00000556486 SYNJ2BPP57105 145 aa7.55□□□□□ -1.2
SCFD1-220ENST00000556486 UBE2KP61086 200 aa7.55□□□□□ -1.2
SCFD1-220ENST00000556486 MLLT11Q13015 90 aaPredicted RBP7.55□□□□□ -1.2
SCFD1-220ENST00000556486 TATDN3Q17R31 274 aa7.55□□□□□ -1.2
SCFD1-220ENST00000556486 RTL8BQ17RB0 113 aa7.55□□□□□ -1.2
SCFD1-220ENST00000556486 GTSCR1Q86UQ5 136 aa7.55□□□□□ -1.2
SCFD1-220ENST00000556486 TEX45Q8NA69 505 aa7.55□□□□□ -1.2
SCFD1-220ENST00000556486 FAM3DQ96BQ1 224 aa7.55□□□□□ -1.2
SCFD1-220ENST00000556486 C5orf30Q96GV9 206 aa7.55□□□□□ -1.2
SCFD1-220ENST00000556486 FYTTD1Q96QD9 318 aaKnown RBP7.55□□□□□ -1.2
SCFD1-220ENST00000556486 ABHD1Q96SE0 405 aa7.55□□□□□ -1.2
SCFD1-220ENST00000556486 OR2D2Q9H210 308 aa7.55□□□□□ -1.2
SCFD1-220ENST00000556486 ZNF355PQ9NSJ1 428 aa7.55□□□□□ -1.2
SCFD1-220ENST00000556486 DKK2Q9UBU2 259 aa7.55□□□□□ -1.2
SCFD1-220ENST00000556486 ABCA13Q86UQ4 5058 aa7.55□□□□□ -1.2
SCFD1-220ENST00000556486 FAM223BA6NKX1 122 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 MFNGO00587 321 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 CTDSP2O14595 271 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 DENRO43583 198 aaKnown RBP7.54□□□□□ -1.2
SCFD1-220ENST00000556486 RBMXL2O75526 392 aaKnown RBP7.54□□□□□ -1.2
SCFD1-220ENST00000556486 TRBV12-3P01733 135 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 FCGR3AP08637 254 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 OR9G9P0C7N8 305 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 DEFA5Q01523 94 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 PRSS8Q16651 343 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 C2orf76Q3KRA6 126 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 IGSF11Q5DX21 431 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 FAM223AQ8IWN6 122 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 OR10J5Q8NHC4 309 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 OSR1Q8TAX0 266 aaPredicted RBP7.54□□□□□ -1.2
SCFD1-220ENST00000556486 GATAD1Q8WUU5 269 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 SNAPC3Q92966 411 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 TMEM203Q969S6 136 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 RAB3CQ96E17 227 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 SAT2Q96F10 170 aaPredicted RBP7.54□□□□□ -1.2
SCFD1-220ENST00000556486 ADTRPQ96IZ2 230 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 VCXQ9H320 206 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 ACOT13Q9NPJ3 140 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 SCN3BQ9NY72 215 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 ZNF230Q9UIE0 474 aaPredicted RBP7.54□□□□□ -1.2
SCFD1-220ENST00000556486 RAB22AQ9UL26 194 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 AK6Q9Y3D8 172 aaKnown RBP7.54□□□□□ -1.2
SCFD1-220ENST00000556486 SELENOKQ9Y6D0 94 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 V9GY05 133 aa7.54□□□□□ -1.2
SCFD1-220ENST00000556486 PRYO14603 147 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms