RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 DDA1Q9BW61 102 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 ACTR3CQ9C0K3 210 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-241ENST00000556374 OR51I2Q9H344 312 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 C11orf1Q9H5F2 150 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 GSN-AS1Q9NRJ2 163 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 SLC39A9Q9NUM3 307 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 TMEM242Q9NWH2 141 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 ZNF581Q9P0T4 197 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 ERRFI1Q9UJM3 462 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-241ENST00000556374 PPP1R3CQ9UQK1 317 aa3.68□□□□□ -1.82
ATXN3-241ENST00000556374 APCP25054 2843 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 TGIF2-C20orf24A0A0A6YYL0 155 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 CTXND1A0A1B0GTU2 59 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 MDFIC2A0A1B0GVS7 189 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 A0A1W2PPE3 182 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 OOEPA6NGQ2 149 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 OR5H1A6NKK0 313 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 LINC00587B1AMM8 73 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 WDR1O75083 606 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 ZNF737O75373 536 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 NDUFS6O75380 124 aaKnown RBP3.67□□□□□ -1.82
ATXN3-241ENST00000556374 RFPL3SP0C7P2 107 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 CCL2P13500 99 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 CA6P23280 308 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 ACP1P24666 158 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 GALR1P47211 349 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 LHX2P50458 406 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 FAM3BP58499 235 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-241ENST00000556374 PKIAP61925 76 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 PPP1CBP62140 327 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 RPL19P84098 196 aaKnown RBP3.67□□□□□ -1.82
ATXN3-241ENST00000556374 MEF2BQ02080 365 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-241ENST00000556374 HERPUD1Q15011 391 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 OR1C1Q15619 314 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 LRRC75BQ2VPJ9 315 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 OR2B11Q5JQS5 317 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 FFAR4Q5NUL3 377 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 ZNF880Q6PDB4 577 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 CYP2G1PQ6ZSU1 146 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 TGIF2LYQ8IUE0 185 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 ZNF525Q8N782 197 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 ZNF645Q8N7E2 425 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 OR10P1Q8NGE3 313 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 OR10A7Q8NGE5 316 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 OR10D4PQ8NGN7 298 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 OR1K1Q8NGR3 316 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 OR5R1Q8NH85 324 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 PPP1R35Q8TAP8 253 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 MPLKIPQ8TAP9 179 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 FGFBP3Q8TAT2 258 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 PLPPR1Q8TBJ4 325 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 TAF15Q92804 592 aaKnown RBP eCLIP3.67□□□□□ -1.82
ATXN3-241ENST00000556374 GALMQ96C23 342 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 R3HDM4Q96D70 268 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 ACY3Q96HD9 319 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 POM121L2Q96KW2 1035 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 FER1L6-AS2Q96M78 137 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 SIGLEC12Q96PQ1 595 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 AGMATQ9BSE5 352 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 RSG1Q9BU20 258 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 GGACTQ9BVM4 153 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 TTTY12Q9BZ98 90 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 WDR61Q9GZS3 305 aaKnown RBP3.67□□□□□ -1.82
ATXN3-241ENST00000556374 OR2D2Q9H210 308 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 HIPK2Q9H2X6 1198 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 OR51B6Q9H340 312 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 ZNF665Q9H7R5 613 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 SLC25A22Q9H936 323 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 AKIRIN1Q9H9L7 192 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-241ENST00000556374 RAB9BQ9NP90 201 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 MTCH1Q9NZJ7 389 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 DOK5Q9P104 306 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 OR1A1Q9P1Q5 309 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 PITPNC1Q9UKF7 332 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 SPTBP11277 2137 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 CSMD2Q7Z408 3487 aa3.67□□□□□ -1.82
ATXN3-241ENST00000556374 TRBV24-1A0A075B6N3 115 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 TRAV24A0A0B4J272 114 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 IGKV1-6A0A0C4DH72 117 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 A0A1W2PNU3 283 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-241ENST00000556374 ZNF729A6NN14 1252 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-241ENST00000556374 F6UZH7 168 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 TMEM250H0YL14 139 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 RAB29O14966 203 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 PDE6DO43924 150 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 MPDU1O75352 247 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 KBTBD11O94819 623 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 YIF1AO95070 293 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 OR2H2O95918 312 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 HAND1O96004 215 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 MT-CO2P00403 227 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 HRASP01112 189 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 NGFP01138 241 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 TRGC2P03986 189 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 CXCL1P09341 107 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 TRGC1P0CF51 173 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 FABP4P15090 132 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 SRP14P37108 136 aaKnown RBP3.66□□□□□ -1.82
ATXN3-241ENST00000556374 MAGEA5P43359 124 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 GABRA2P47869 451 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms