RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 SPAG16Q8N0X2 631 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 OR52M1Q8NGK5 317 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 LRRC20Q8TCA0 184 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 TCTEX1D2Q8WW35 142 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 GPR146Q96CH1 333 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 FAM210AQ96ND0 272 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 SLC25A31Q9H0C2 315 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 PARP12Q9H0J9 701 aaKnown RBP5.59□□□□□ -1.51
SLIRP-204ENST00000555890 CBLN4Q9NTU7 201 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 DCAF16Q9NXF7 216 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 IDI2-AS1Q9NZ38 188 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 KAAG1Q9UBP8 84 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 GAB2Q9UQC2 676 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 RCL1Q9Y2P8 373 aaKnown RBP5.59□□□□□ -1.51
SLIRP-204ENST00000555890 LINC00312Q9Y6C7 94 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 CR1P17927 2039 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 BORCS7-ASMTA0A0B4J1R7 106 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 A0A1W2PRX2 142 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 MEX3AA1L020 520 aaKnown RBP5.58□□□□□ -1.52
SLIRP-204ENST00000555890 TNFRSF13BO14836 293 aaPredicted RBP5.58□□□□□ -1.52
SLIRP-204ENST00000555890 MED6O75586 246 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 JTBO76095 146 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 SCGB1D1O95968 90 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 SELLP14151 372 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 DAOP14920 347 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 LOXP28300 417 aaPredicted RBP5.58□□□□□ -1.52
SLIRP-204ENST00000555890 KIR2DS2P43631 304 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 ZNF134P52741 427 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 RPL23AP62750 156 aaKnown RBP5.58□□□□□ -1.52
SLIRP-204ENST00000555890 RPL31P62899 125 aaKnown RBP5.58□□□□□ -1.52
SLIRP-204ENST00000555890 EIF4EBP1Q13541 118 aaPredicted RBP5.58□□□□□ -1.52
SLIRP-204ENST00000555890 RNF151Q2KHN1 245 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 C17orf58Q2M2W7 97 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 Q3ZCU0 254 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 ZNF585BQ52M93 769 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 ALKAL2Q6UX46 152 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 BAP18Q8IXM2 172 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 PDZD9Q8IXQ8 264 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 LRRC75A-AS1Q8N1F1 130 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.58□□□□□ -1.52
SLIRP-204ENST00000555890 STOML3Q8TAV4 291 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 NEU4Q8WWR8 484 aaPredicted RBP5.58□□□□□ -1.52
SLIRP-204ENST00000555890 ADTRPQ96IZ2 230 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 AGMATQ9BSE5 352 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 LINC00574Q9H8X3 128 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 SDHAF2Q9NX18 166 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 PRELID3BQ9Y3B1 194 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 MMP24Q9Y5R2 645 aa5.58□□□□□ -1.52
SLIRP-204ENST00000555890 MSGN1A6NI15 193 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 FAM90A26D6RGX4 464 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 M0R1X1 148 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 DVL1O14640 695 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 RAB29O14966 203 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 PITX3O75364 302 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 GAPDHP04406 335 aaKnown RBP5.57□□□□□ -1.52
SLIRP-204ENST00000555890 OMGP23515 440 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 NFYBP25208 207 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 ARHGDIBP52566 201 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 TMEM33P57088 247 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 POLR2GP62487 172 aaKnown RBP eCLIP5.57□□□□□ -1.52
SLIRP-204ENST00000555890 MRPS11P82912 194 aaKnown RBP5.57□□□□□ -1.52
SLIRP-204ENST00000555890 CXorf66Q5JRM2 361 aaPredicted RBP5.57□□□□□ -1.52
SLIRP-204ENST00000555890 DUX4L9Q6RFH8 374 aaPredicted RBP5.57□□□□□ -1.52
SLIRP-204ENST00000555890 LYPD2Q6UXB3 125 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 BTNL3Q6UXE8 466 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 FGFRL1Q8N441 504 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 DMBX1Q8NFW5 382 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 H1FXQ92522 213 aaKnown RBP5.57□□□□□ -1.52
SLIRP-204ENST00000555890 RAB1CQ92928 201 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 TIMD4Q96H15 378 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 ZNF714Q96N38 554 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 RAB40CQ96S21 281 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 S1PR3Q99500 378 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 ABHD14AQ9BUJ0 271 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 CYTL1Q9NRR1 136 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.57□□□□□ -1.52
SLIRP-204ENST00000555890 COA4Q9NYJ1 87 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 CACNG5Q9UF02 275 aa5.57□□□□□ -1.52
SLIRP-204ENST00000555890 RPUSD1Q9UJJ7 312 aaKnown RBP5.57□□□□□ -1.52
SLIRP-204ENST00000555890 DOCK11Q5JSL3 2073 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 RPS10-NUDT3A0A1W2PQS6 291 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 C17orf98A8MV24 154 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 TOR1AO14656 332 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 RBFOX2O43251 390 aaKnown RBP eCLIP5.56□□□□□ -1.52
SLIRP-204ENST00000555890 SYNGR2O43760 224 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 CHST1O43916 411 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 SSSCA1O60232 199 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 HPRT1P00492 218 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 KRASP01116 189 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 IGKV1-39P01597 117 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 IGKV1-5P01602 117 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 IGKV1D-39P04432 117 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 GCSHP23434 173 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 COL8A2P25067 703 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 PPIFP30405 207 aaKnown RBP5.56□□□□□ -1.52
SLIRP-204ENST00000555890 DUTP33316 252 aaKnown RBP5.56□□□□□ -1.52
SLIRP-204ENST00000555890 THBS3P49746 956 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 CAV2P51636 162 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 RPL30P62888 115 aaKnown RBP5.56□□□□□ -1.52
SLIRP-204ENST00000555890 RPP30P78346 268 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms