RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 RAB1CQ92928 201 aa14.93□□□□□ -0.02
SYNE3-204ENST00000555759 GFI1Q99684 422 aa14.93□□□□□ -0.02
SYNE3-204ENST00000555759 MKRN2OSH3BPM6 223 aa14.92□□□□□ -0.02
SYNE3-204ENST00000555759 TFF3Q07654 80 aa14.92□□□□□ -0.02
SYNE3-204ENST00000555759 MMDQ15546 238 aa14.92□□□□□ -0.02
SYNE3-204ENST00000555759 NHSL1Q5SYE7 1610 aa14.92□□□□□ -0.02
SYNE3-204ENST00000555759 WNK3Q9BYP7 1800 aa14.92□□□□□ -0.02
SYNE3-204ENST00000555759 SFTPA2Q8IWL1 248 aa14.92□□□□□ -0.02
SYNE3-204ENST00000555759 MEGF9Q9H1U4 602 aa14.92□□□□□ -0.02
SYNE3-204ENST00000555759 SCN3AQ9NY46 2000 aa14.92□□□□□ -0.02
SYNE3-204ENST00000555759 SLC25A10Q9UBX3 287 aaPredicted RBP14.92□□□□□ -0.02
SYNE3-204ENST00000555759 IGHV3OR15-7A0A075B7D8 119 aa14.92□□□□□ -0.02
SYNE3-204ENST00000555759 FAM157AC9JC47 383 aa14.92□□□□□ -0.02
SYNE3-204ENST00000555759 CGAP01215 116 aa14.92□□□□□ -0.02
SYNE3-204ENST00000555759 OR4A5Q8NH83 315 aa14.92□□□□□ -0.02
SYNE3-204ENST00000555759 TRAV30A0A087WSZ9 112 aa14.91□□□□□ -0.02
SYNE3-204ENST00000555759 TFPI2P48307 235 aa14.91□□□□□ -0.02
SYNE3-204ENST00000555759 ZNF784Q8NCA9 323 aaPredicted RBP14.91□□□□□ -0.02
SYNE3-204ENST00000555759 PRELID3AQ96N28 172 aa14.91□□□□□ -0.02
SYNE3-204ENST00000555759 RPP21Q9H633 154 aaKnown RBP14.91□□□□□ -0.02
SYNE3-204ENST00000555759 PAPPA2Q9BXP8 1791 aa14.91□□□□□ -0.02
SYNE3-204ENST00000555759 A0A1B0GUT8 65 aa14.91□□□□□ -0.02
SYNE3-204ENST00000555759 NUDT10Q8NFP7 164 aa14.91□□□□□ -0.02
SYNE3-204ENST00000555759 ZNF501Q96CX3 271 aaPredicted RBP14.91□□□□□ -0.02
SYNE3-204ENST00000555759 J3QW42 95 aa14.91□□□□□ -0.02
SYNE3-204ENST00000555759 PEX7O00628 323 aa14.91□□□□□ -0.02
SYNE3-204ENST00000555759 ID3Q02535 119 aa14.91□□□□□ -0.02
SYNE3-204ENST00000555759 PCSK4Q6UW60 755 aa14.91□□□□□ -0.02
SYNE3-204ENST00000555759 WNT5BQ9H1J7 359 aa14.91□□□□□ -0.02
SYNE3-204ENST00000555759 WFDC1Q9HC57 220 aa14.91□□□□□ -0.02
SYNE3-204ENST00000555759 CALYQ9NYX4 217 aa14.91□□□□□ -0.02
SYNE3-204ENST00000555759 UBALD2Q8IYN6 164 aa14.91□□□□□ -0.02
SYNE3-204ENST00000555759 CT55Q8WUE5 264 aa14.91□□□□□ -0.02
SYNE3-204ENST00000555759 STRCP1A6NGW2 1772 aa14.9□□□□□ -0.02
SYNE3-204ENST00000555759 C10orf126Q8N4M7 172 aa14.9□□□□□ -0.02
SYNE3-204ENST00000555759 IGHV3-21A0A0B4J1V1 117 aa14.9□□□□□ -0.02
SYNE3-204ENST00000555759 CEACAM1P13688 526 aa14.9□□□□□ -0.02
SYNE3-204ENST00000555759 FOXL1Q12952 345 aa14.9□□□□□ -0.02
SYNE3-204ENST00000555759 FAM89BQ8N5H3 189 aa14.9□□□□□ -0.02
SYNE3-204ENST00000555759 ORAOV1Q8WV07 137 aa14.9□□□□□ -0.02
SYNE3-204ENST00000555759 OR2K2Q8NGT1 345 aa14.9□□□□□ -0.02
SYNE3-204ENST00000555759 PPIHO43447 177 aaKnown RBP14.9□□□□□ -0.02
SYNE3-204ENST00000555759 ACSF3Q4G176 576 aaPredicted RBP14.9□□□□□ -0.02
SYNE3-204ENST00000555759 TIMM23BQ5SRD1 257 aa14.9□□□□□ -0.02
SYNE3-204ENST00000555759 MS4A6AQ9H2W1 248 aa14.9□□□□□ -0.02
SYNE3-204ENST00000555759 F5P12259 2224 aa14.9□□□□□ -0.02
SYNE3-204ENST00000555759 DOCK5Q9H7D0 1870 aa14.9□□□□□ -0.02
SYNE3-204ENST00000555759 ATXN7O15265 892 aaPredicted RBP14.89□□□□□ -0.03
SYNE3-204ENST00000555759 AGFG2O95081 481 aa14.89□□□□□ -0.03
SYNE3-204ENST00000555759 IDI2-AS1Q9NZ38 188 aa14.89□□□□□ -0.03
SYNE3-204ENST00000555759 TRAV8-6A0A0B4J262 113 aa14.89□□□□□ -0.03
SYNE3-204ENST00000555759 C1QTNF9P0C862 333 aa14.89□□□□□ -0.03
SYNE3-204ENST00000555759 CCDC144NLQ6NUI1 221 aa14.89□□□□□ -0.03
SYNE3-204ENST00000555759 FMC1Q96HJ9 113 aa14.89□□□□□ -0.03
SYNE3-204ENST00000555759 ELOVL5Q9NYP7 299 aa14.89□□□□□ -0.03
SYNE3-204ENST00000555759 CLEC1BQ9P126 229 aa14.89□□□□□ -0.03
SYNE3-204ENST00000555759 DCAF10Q5QP82 559 aa14.89□□□□□ -0.03
SYNE3-204ENST00000555759 PGPEP1LA6NFU8 196 aa14.89□□□□□ -0.03
SYNE3-204ENST00000555759 TSPAN13O95857 204 aa14.89□□□□□ -0.03
SYNE3-204ENST00000555759 REG1BP48304 166 aa14.89□□□□□ -0.03
SYNE3-204ENST00000555759 DIRC2Q96SL1 478 aa14.89□□□□□ -0.03
SYNE3-204ENST00000555759 TMUB1Q9BVT8 246 aa14.89□□□□□ -0.03
SYNE3-204ENST00000555759 TMEM160Q9NX00 188 aa14.89□□□□□ -0.03
SYNE3-204ENST00000555759 PPIAL4DF5H284 164 aa14.88□□□□□ -0.03
SYNE3-204ENST00000555759 GDF15Q99988 308 aa14.88□□□□□ -0.03
SYNE3-204ENST00000555759 TMEM208Q9BTX3 173 aa14.88□□□□□ -0.03
SYNE3-204ENST00000555759 ID1P41134 155 aa14.88□□□□□ -0.03
SYNE3-204ENST00000555759 UBE2V1Q13404 147 aa14.88□□□□□ -0.03
SYNE3-204ENST00000555759 GOLT1AQ6ZVE7 132 aa14.88□□□□□ -0.03
SYNE3-204ENST00000555759 FNDC4Q9H6D8 234 aaPredicted RBP14.88□□□□□ -0.03
SYNE3-204ENST00000555759 CRXO43186 299 aaPredicted RBP14.88□□□□□ -0.03
SYNE3-204ENST00000555759 SNAI2O43623 268 aa14.88□□□□□ -0.03
SYNE3-204ENST00000555759 MBNL2Q5VZF2 373 aaKnown RBP14.88□□□□□ -0.03
SYNE3-204ENST00000555759 OR5P3Q8WZ94 311 aa14.88□□□□□ -0.03
SYNE3-204ENST00000555759 RAB1BQ9H0U4 201 aa14.88□□□□□ -0.03
SYNE3-204ENST00000555759 J3KRW8 73 aa14.88□□□□□ -0.03
SYNE3-204ENST00000555759 CIRBPQ14011 172 aaKnown RBP14.88□□□□□ -0.03
SYNE3-204ENST00000555759 C3AR1Q16581 482 aa14.88□□□□□ -0.03
SYNE3-204ENST00000555759 GFRALQ6UXV0 394 aa14.88□□□□□ -0.03
SYNE3-204ENST00000555759 PLPPR1Q8TBJ4 325 aa14.88□□□□□ -0.03
SYNE3-204ENST00000555759 CHCHD1Q96BP2 118 aaKnown RBP14.88□□□□□ -0.03
SYNE3-204ENST00000555759 TMEM262E9PQX1 116 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 MST1P26927 711 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 RIPPLY3P57055 190 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 ZDHHC16Q969W1 377 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 EAF1Q96JC9 268 aaPredicted RBP14.87□□□□□ -0.03
SYNE3-204ENST00000555759 AICDAQ9GZX7 198 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 hCG_38984A0A1B0GV85 526 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 IGKV3-11P04433 115 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 TDGF1P3P51864 188 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 RAXQ9Y2V3 346 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 C21orf140B9A014 251 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 NPIPB6E9PJ23 425 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 APELAP0DMC3 54 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 PAPPA-AS1Q5QFB9 102 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 SYT8Q8NBV8 401 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 MS4A5Q9H3V2 200 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 ADAMTSL1Q8N6G6 1762 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 PPIAL4EA0A075B759 164 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 PPIAL4FP0DN26 164 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms