RNA–Protein interactions for RNA: ENST00000555608.5

EFCAB11-207, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-207ENST00000555608 KIR2DS2P43631 304 aa11.37□□□□□ -0.59
EFCAB11-207ENST00000555608 RPL27AP46776 148 aaKnown RBP11.37□□□□□ -0.59
EFCAB11-207ENST00000555608 RFX2P48378 723 aa11.37□□□□□ -0.59
EFCAB11-207ENST00000555608 SYNJ2BPP57105 145 aa11.37□□□□□ -0.59
EFCAB11-207ENST00000555608 HERV-K104P61576 105 aa11.37□□□□□ -0.59
EFCAB11-207ENST00000555608 ZNF343Q6P1L6 599 aa11.37□□□□□ -0.59
EFCAB11-207ENST00000555608 OR51H1Q8NH63 302 aa11.37□□□□□ -0.59
EFCAB11-207ENST00000555608 TMEM167AQ8TBQ9 72 aa11.37□□□□□ -0.59
EFCAB11-207ENST00000555608 SPIN2AQ99865 258 aa11.37□□□□□ -0.59
EFCAB11-207ENST00000555608 SPIN2BQ9BPZ2 258 aa11.37□□□□□ -0.59
EFCAB11-207ENST00000555608 FXYD6Q9H0Q3 95 aa11.37□□□□□ -0.59
EFCAB11-207ENST00000555608 PEF1Q9UBV8 284 aaKnown RBP11.37□□□□□ -0.59
EFCAB11-207ENST00000555608 IL6RP08887 468 aaPredicted RBP11.36□□□□□ -0.59
EFCAB11-207ENST00000555608 CATR1Q13166 79 aa11.36□□□□□ -0.59
EFCAB11-207ENST00000555608 MSMO1Q15800 293 aa11.36□□□□□ -0.59
EFCAB11-207ENST00000555608 AADACL3Q5VUY0 350 aa11.36□□□□□ -0.59
EFCAB11-207ENST00000555608 TTC9CQ8N5M4 171 aa11.36□□□□□ -0.59
EFCAB11-207ENST00000555608 VSTM2AQ8TAG5 236 aa11.36□□□□□ -0.59
EFCAB11-207ENST00000555608 GIMAP1Q8WWP7 306 aa11.36□□□□□ -0.59
EFCAB11-207ENST00000555608 USMG5Q96IX5 58 aa11.36□□□□□ -0.59
EFCAB11-207ENST00000555608 ZNF2Q9BSG1 426 aaPredicted RBP11.36□□□□□ -0.59
EFCAB11-207ENST00000555608 ELOVL1Q9BW60 279 aa11.36□□□□□ -0.59
EFCAB11-207ENST00000555608 SMAD5-AS1Q9Y6J3 95 aa11.36□□□□□ -0.59
EFCAB11-207ENST00000555608 RYR3Q15413 4870 aa11.35□□□□□ -0.59
EFCAB11-207ENST00000555608 HUWE1Q7Z6Z7 4374 aaKnown RBP11.35□□□□□ -0.59
EFCAB11-207ENST00000555608 TRBV9A0A0B4J1U6 114 aa11.35□□□□□ -0.59
EFCAB11-207ENST00000555608 FAM223BA6NKX1 122 aa11.35□□□□□ -0.59
EFCAB11-207ENST00000555608 S1PR2O95136 353 aa11.35□□□□□ -0.59
EFCAB11-207ENST00000555608 HRASP01112 189 aa11.35□□□□□ -0.59
EFCAB11-207ENST00000555608 REG1AP05451 166 aa11.35□□□□□ -0.59
EFCAB11-207ENST00000555608 AREGP15514 252 aa11.35□□□□□ -0.59
EFCAB11-207ENST00000555608 RPA2P15927 270 aa11.35□□□□□ -0.59
EFCAB11-207ENST00000555608 KLF5Q13887 457 aaPredicted RBP11.35□□□□□ -0.59
EFCAB11-207ENST00000555608 RPEL1Q2QD12 228 aa11.35□□□□□ -0.59
EFCAB11-207ENST00000555608 OR4A47Q6IF82 309 aa11.35□□□□□ -0.59
EFCAB11-207ENST00000555608 ANKRD13BQ86YJ7 626 aa11.35□□□□□ -0.59
EFCAB11-207ENST00000555608 FAM223AQ8IWN6 122 aa11.35□□□□□ -0.59
EFCAB11-207ENST00000555608 ZBTB34Q8NCN2 500 aa11.35□□□□□ -0.59
EFCAB11-207ENST00000555608 OR9G4Q8NGQ1 327 aa11.35□□□□□ -0.59
EFCAB11-207ENST00000555608 OR5H2Q8NGV7 314 aa11.35□□□□□ -0.59
EFCAB11-207ENST00000555608 KCTD12Q96CX2 325 aaKnown RBP11.35□□□□□ -0.59
EFCAB11-207ENST00000555608 HRASLSQ9HDD0 168 aa11.35□□□□□ -0.59
EFCAB11-207ENST00000555608 S4R3C0 116 aa11.35□□□□□ -0.59
EFCAB11-207ENST00000555608 TRAV3A0A0B4J244 114 aa11.34□□□□□ -0.59
EFCAB11-207ENST00000555608 DPPA5A6NC42 116 aa11.34□□□□□ -0.59
EFCAB11-207ENST00000555608 BMPR1BO00238 502 aa11.34□□□□□ -0.59
EFCAB11-207ENST00000555608 HPGDSO60760 199 aa11.34□□□□□ -0.59
EFCAB11-207ENST00000555608 IGLV1-51P01701 117 aa11.34□□□□□ -0.59
EFCAB11-207ENST00000555608 IGHV3-23P01764 117 aa11.34□□□□□ -0.59
EFCAB11-207ENST00000555608 RLN1P04808 185 aa11.34□□□□□ -0.59
EFCAB11-207ENST00000555608 ZNF735P0CB33 412 aa11.34□□□□□ -0.59
EFCAB11-207ENST00000555608 HLA-DMAP28067 261 aa11.34□□□□□ -0.59
EFCAB11-207ENST00000555608 PRSS3P35030 304 aa11.34□□□□□ -0.59
EFCAB11-207ENST00000555608 HRH1P35367 487 aa11.34□□□□□ -0.59
EFCAB11-207ENST00000555608 RPL8P62917 257 aaKnown RBP11.34□□□□□ -0.59
EFCAB11-207ENST00000555608 ATP5G2Q06055 141 aa11.34□□□□□ -0.59
EFCAB11-207ENST00000555608 RNASE12Q5GAN4 147 aaKnown RBP11.34□□□□□ -0.59
EFCAB11-207ENST00000555608 SNX29P2Q8IUI4 249 aa11.34□□□□□ -0.59
EFCAB11-207ENST00000555608 MOB3AQ96BX8 217 aa11.34□□□□□ -0.59
EFCAB11-207ENST00000555608 BET1LQ9NYM9 111 aa11.34□□□□□ -0.59
EFCAB11-207ENST00000555608 ZNF257Q9Y2Q1 563 aa11.34□□□□□ -0.59
EFCAB11-207ENST00000555608 CGB1A6NKQ9 187 aa11.33□□□□□ -0.6
EFCAB11-207ENST00000555608 PPP5D1E7EU14 171 aa11.33□□□□□ -0.6
EFCAB11-207ENST00000555608 RBFOX2O43251 390 aaKnown RBP eCLIP11.33□□□□□ -0.6
EFCAB11-207ENST00000555608 HLA-GP17693 338 aa11.33□□□□□ -0.6
EFCAB11-207ENST00000555608 NAT1P18440 290 aa11.33□□□□□ -0.6
EFCAB11-207ENST00000555608 ELK1P19419 428 aa11.33□□□□□ -0.6
EFCAB11-207ENST00000555608 GNRHRP30968 328 aa11.33□□□□□ -0.6
EFCAB11-207ENST00000555608 MAS1LP35410 378 aa11.33□□□□□ -0.6
EFCAB11-207ENST00000555608 TAS2R46P59540 309 aa11.33□□□□□ -0.6
EFCAB11-207ENST00000555608 C15orf32Q32M92 178 aa11.33□□□□□ -0.6
EFCAB11-207ENST00000555608 IL34Q6ZMJ4 242 aa11.33□□□□□ -0.6
EFCAB11-207ENST00000555608 SLC2A9Q9NRM0 540 aa11.33□□□□□ -0.6
EFCAB11-207ENST00000555608 TMEM140Q9NV12 185 aa11.33□□□□□ -0.6
EFCAB11-207ENST00000555608 U3KQK5 164 aa11.33□□□□□ -0.6
EFCAB11-207ENST00000555608 SORL1Q92673 2214 aa11.33□□□□□ -0.6
EFCAB11-207ENST00000555608 NPIPB5A8MRT5 1133 aa11.32□□□□□ -0.6
EFCAB11-207ENST00000555608 GABARAPO95166 117 aa11.32□□□□□ -0.6
EFCAB11-207ENST00000555608 HPRT1P00492 218 aa11.32□□□□□ -0.6
EFCAB11-207ENST00000555608 HLA-AP01891 365 aaKnown RBP11.32□□□□□ -0.6
EFCAB11-207ENST00000555608 CSN3P07498 182 aa11.32□□□□□ -0.6
EFCAB11-207ENST00000555608 TAS2R31P59538 309 aa11.32□□□□□ -0.6
EFCAB11-207ENST00000555608 SLC25A42Q86VD7 318 aa11.32□□□□□ -0.6
EFCAB11-207ENST00000555608 NECAP1Q8NC96 275 aa11.32□□□□□ -0.6
EFCAB11-207ENST00000555608 DMBX1Q8NFW5 382 aa11.32□□□□□ -0.6
EFCAB11-207ENST00000555608 GPX8Q8TED1 209 aa11.32□□□□□ -0.6
EFCAB11-207ENST00000555608 WWC2-AS2Q96NR7 200 aa11.32□□□□□ -0.6
EFCAB11-207ENST00000555608 FBXL7Q9UJT9 491 aa11.32□□□□□ -0.6
EFCAB11-207ENST00000555608 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.31□□□□□ -0.6
EFCAB11-207ENST00000555608 FAM25AB3EWG3 89 aa11.31□□□□□ -0.6
EFCAB11-207ENST00000555608 FAM25CB3EWG5 89 aa11.31□□□□□ -0.6
EFCAB11-207ENST00000555608 FAM25GB3EWG6 89 aa11.31□□□□□ -0.6
EFCAB11-207ENST00000555608 UPK2O00526 184 aa11.31□□□□□ -0.6
EFCAB11-207ENST00000555608 NDUFB8O95169 186 aa11.31□□□□□ -0.6
EFCAB11-207ENST00000555608 APOA1P02647 267 aa11.31□□□□□ -0.6
EFCAB11-207ENST00000555608 FRMD6-AS1P0C7T7 363 aa11.31□□□□□ -0.6
EFCAB11-207ENST00000555608 NHLRC4P0CG21 123 aaPredicted RBP11.31□□□□□ -0.6
EFCAB11-207ENST00000555608 NQO2P16083 231 aa11.31□□□□□ -0.6
EFCAB11-207ENST00000555608 EDN2P20800 178 aa11.31□□□□□ -0.6
EFCAB11-207ENST00000555608 PSMB6P28072 239 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms