RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 SFTPCP11686 197 aa9.91□□□□□ -0.82
XRCC3-208ENST00000554811 CBLN1P23435 193 aa9.91□□□□□ -0.82
XRCC3-208ENST00000554811 GNB2P62879 340 aa9.91□□□□□ -0.82
XRCC3-208ENST00000554811 HTD2P86397 168 aa9.91□□□□□ -0.82
XRCC3-208ENST00000554811 FXYD3Q14802 87 aa9.91□□□□□ -0.82
XRCC3-208ENST00000554811 Q5PR19 223 aa9.91□□□□□ -0.82
XRCC3-208ENST00000554811 C9orf106Q8NAJ2 232 aa9.91□□□□□ -0.82
XRCC3-208ENST00000554811 CXXC4Q9H2H0 198 aa9.91□□□□□ -0.82
XRCC3-208ENST00000554811 CBLN4Q9NTU7 201 aa9.91□□□□□ -0.82
XRCC3-208ENST00000554811 PXMP4Q9Y6I8 212 aa9.91□□□□□ -0.82
XRCC3-208ENST00000554811 IGF2RP11717 2491 aa9.9□□□□□ -0.82
XRCC3-208ENST00000554811 PIGBOS1A0A0B4J2F0 54 aa9.9□□□□□ -0.82
XRCC3-208ENST00000554811 ZNF729A6NN14 1252 aaPredicted RBP9.9□□□□□ -0.82
XRCC3-208ENST00000554811 AMBPP02760 352 aa9.9□□□□□ -0.82
XRCC3-208ENST00000554811 ERVFC1-1P60608 527 aa9.9□□□□□ -0.82
XRCC3-208ENST00000554811 OR5I1Q13606 314 aa9.9□□□□□ -0.82
XRCC3-208ENST00000554811 C16orf54Q6UWD8 224 aa9.9□□□□□ -0.82
XRCC3-208ENST00000554811 TOMM20LQ6UXN7 152 aa9.9□□□□□ -0.82
XRCC3-208ENST00000554811 LINC00596Q86U02 117 aa9.9□□□□□ -0.82
XRCC3-208ENST00000554811 CIB3Q96Q77 187 aaPredicted RBP9.9□□□□□ -0.82
XRCC3-208ENST00000554811 OR2V2Q96R30 315 aa9.9□□□□□ -0.82
XRCC3-208ENST00000554811 NOTCH2Q04721 2471 aa9.9□□□□□ -0.82
XRCC3-208ENST00000554811 HRASP01112 189 aa9.9□□□□□ -0.82
XRCC3-208ENST00000554811 SPATA31B1PQ5VZV4 182 aa9.9□□□□□ -0.82
XRCC3-208ENST00000554811 WDR82Q6UXN9 313 aa9.9□□□□□ -0.82
XRCC3-208ENST00000554811 ACP7Q6ZNF0 438 aa9.9□□□□□ -0.82
XRCC3-208ENST00000554811 CYP2G1PQ6ZSU1 146 aa9.9□□□□□ -0.82
XRCC3-208ENST00000554811 OR8G5Q8NG78 346 aa9.9□□□□□ -0.82
XRCC3-208ENST00000554811 TMEM18Q96B42 140 aa9.9□□□□□ -0.82
XRCC3-208ENST00000554811 PSMG3Q9BT73 122 aaPredicted RBP9.9□□□□□ -0.82
XRCC3-208ENST00000554811 IGHV3-21A0A0B4J1V1 117 aa9.89□□□□□ -0.83
XRCC3-208ENST00000554811 PLAUP00749 431 aa9.89□□□□□ -0.83
XRCC3-208ENST00000554811 S100A7P31151 101 aa9.89□□□□□ -0.83
XRCC3-208ENST00000554811 KRTAP27-1Q3LI81 207 aa9.89□□□□□ -0.83
XRCC3-208ENST00000554811 DPPA3Q6W0C5 159 aa9.89□□□□□ -0.83
XRCC3-208ENST00000554811 MOB3BQ86TA1 216 aa9.89□□□□□ -0.83
XRCC3-208ENST00000554811 MS4A5Q9H3V2 200 aa9.89□□□□□ -0.83
XRCC3-208ENST00000554811 RYDENQ9NUL5 291 aaKnown RBP9.89□□□□□ -0.83
XRCC3-208ENST00000554811 ELOA3CA0A087WX78 387 aaPredicted RBP9.89□□□□□ -0.83
XRCC3-208ENST00000554811 C21orf140B9A014 251 aa9.89□□□□□ -0.83
XRCC3-208ENST00000554811 CEACAM1P13688 526 aa9.89□□□□□ -0.83
XRCC3-208ENST00000554811 HIST1H1BP16401 226 aaKnown RBP9.89□□□□□ -0.83
XRCC3-208ENST00000554811 NTF3P20783 257 aa9.89□□□□□ -0.83
XRCC3-208ENST00000554811 HOXA6P31267 233 aa9.89□□□□□ -0.83
XRCC3-208ENST00000554811 IER3P46695 156 aa9.89□□□□□ -0.83
XRCC3-208ENST00000554811 DUX4L9Q6RFH8 374 aaPredicted RBP9.89□□□□□ -0.83
XRCC3-208ENST00000554811 TMEM256Q8N2U0 113 aa9.89□□□□□ -0.83
XRCC3-208ENST00000554811 ZNF114Q8NC26 417 aa9.89□□□□□ -0.83
XRCC3-208ENST00000554811 C5orf30Q96GV9 206 aa9.89□□□□□ -0.83
XRCC3-208ENST00000554811 GMPPAQ96IJ6 420 aaPredicted RBP9.89□□□□□ -0.83
XRCC3-208ENST00000554811 PROCRQ9UNN8 238 aa9.89□□□□□ -0.83
XRCC3-208ENST00000554811 WIPI2Q9Y4P8 454 aa9.89□□□□□ -0.83
XRCC3-208ENST00000554811 CCL8P80075 99 aa9.89□□□□□ -0.83
XRCC3-208ENST00000554811 UTF1Q5T230 341 aa9.89□□□□□ -0.83
XRCC3-208ENST00000554811 MS4A10Q96PG2 267 aa9.89□□□□□ -0.83
XRCC3-208ENST00000554811 SPTBN4Q9H254 2564 aa9.88□□□□□ -0.83
XRCC3-208ENST00000554811 SLC31A2O15432 143 aa9.88□□□□□ -0.83
XRCC3-208ENST00000554811 PPP1R35Q8TAP8 253 aa9.88□□□□□ -0.83
XRCC3-208ENST00000554811 ITLN1Q8WWA0 313 aa9.88□□□□□ -0.83
XRCC3-208ENST00000554811 MBD3L1Q8WWY6 194 aa9.88□□□□□ -0.83
XRCC3-208ENST00000554811 SNRNP40Q96DI7 357 aaKnown RBP9.88□□□□□ -0.83
XRCC3-208ENST00000554811 CCL13Q99616 98 aa9.88□□□□□ -0.83
XRCC3-208ENST00000554811 TMEM140Q9NV12 185 aa9.88□□□□□ -0.83
XRCC3-208ENST00000554811 PAM16Q9Y3D7 125 aa9.88□□□□□ -0.83
XRCC3-208ENST00000554811 KRTDAPP60985 99 aa9.88□□□□□ -0.83
XRCC3-208ENST00000554811 PSG5Q15238 335 aa9.88□□□□□ -0.83
XRCC3-208ENST00000554811 MRPL54Q6P161 138 aaKnown RBP9.88□□□□□ -0.83
XRCC3-208ENST00000554811 DMRTC2Q8IXT2 367 aaPredicted RBP9.88□□□□□ -0.83
XRCC3-208ENST00000554811 KDF1Q8NAX2 398 aaPredicted RBP9.88□□□□□ -0.83
XRCC3-208ENST00000554811 A0A1B0GW64 132 aa9.88□□□□□ -0.83
XRCC3-208ENST00000554811 ENSAO43768 121 aaKnown RBP9.88□□□□□ -0.83
XRCC3-208ENST00000554811 PMCHP20382 165 aa9.88□□□□□ -0.83
XRCC3-208ENST00000554811 TRIP6Q15654 476 aaKnown RBP9.88□□□□□ -0.83
XRCC3-208ENST00000554811 GABRA6Q16445 453 aa9.88□□□□□ -0.83
XRCC3-208ENST00000554811 NRN1LQ496H8 165 aa9.88□□□□□ -0.83
XRCC3-208ENST00000554811 TMEM14EPQ6UXP3 125 aa9.88□□□□□ -0.83
XRCC3-208ENST00000554811 C14orf144Q96I85 54 aa9.88□□□□□ -0.83
XRCC3-208ENST00000554811 SRD5A3Q9H8P0 318 aa9.88□□□□□ -0.83
XRCC3-208ENST00000554811 OR6C3Q9NZP0 311 aa9.88□□□□□ -0.83
XRCC3-208ENST00000554811 HSPB7Q9UBY9 170 aa9.88□□□□□ -0.83
XRCC3-208ENST00000554811 CHD8Q9HCK8 2581 aa9.87□□□□□ -0.83
XRCC3-208ENST00000554811 TRAV34A0A0B4J273 112 aa9.87□□□□□ -0.83
XRCC3-208ENST00000554811 IL3RAP26951 378 aa9.87□□□□□ -0.83
XRCC3-208ENST00000554811 CD82P27701 267 aa9.87□□□□□ -0.83
XRCC3-208ENST00000554811 PKIAP61925 76 aa9.87□□□□□ -0.83
XRCC3-208ENST00000554811 RAB31Q13636 194 aa9.87□□□□□ -0.83
XRCC3-208ENST00000554811 SPRNQ5BIV9 151 aa9.87□□□□□ -0.83
XRCC3-208ENST00000554811 Q6ZS49 121 aa9.87□□□□□ -0.83
XRCC3-208ENST00000554811 DOLPP1Q86YN1 238 aa9.87□□□□□ -0.83
XRCC3-208ENST00000554811 TMEM183AQ8IXX5 376 aa9.87□□□□□ -0.83
XRCC3-208ENST00000554811 CD177Q8N6Q3 437 aa9.87□□□□□ -0.83
XRCC3-208ENST00000554811 UHRF2Q96PU4 802 aa9.87□□□□□ -0.83
XRCC3-208ENST00000554811 DDA1Q9BW61 102 aa9.87□□□□□ -0.83
XRCC3-208ENST00000554811 DMXL1Q9Y485 3027 aa9.87□□□□□ -0.83
XRCC3-208ENST00000554811 FCN1O00602 326 aa9.87□□□□□ -0.83
XRCC3-208ENST00000554811 TMPRSS2O15393 492 aa9.87□□□□□ -0.83
XRCC3-208ENST00000554811 OR4A8P0C604 315 aa9.87□□□□□ -0.83
XRCC3-208ENST00000554811 CNN1P51911 297 aaKnown RBP9.87□□□□□ -0.83
XRCC3-208ENST00000554811 GNB1P62873 340 aa9.87□□□□□ -0.83
XRCC3-208ENST00000554811 MLANAQ16655 118 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms