RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 CAB39Q9Y376 341 aaPredicted RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 HDGFL3Q9Y3E1 203 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 SAR1BQ9Y6B6 198 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 APOBP04114 4563 aaKnown RBP0.87□□□□□ -2.27
PRPF39-208ENST00000554785 LRP2P98164 4655 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 A0A1W2PQD3 144 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 SYCE1LA8MT33 242 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 H7C1H1 209 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 DNASE2O00115 360 aaPredicted RBP0.87□□□□□ -2.27
PRPF39-208ENST00000554785 SOCS1O15524 211 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 AKR7A2O43488 359 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 EIF1BO60739 113 aaKnown RBP0.87□□□□□ -2.27
PRPF39-208ENST00000554785 CPSF4O95639 269 aaKnown RBP0.87□□□□□ -2.27
PRPF39-208ENST00000554785 OTCP00480 354 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 HPRT1P00492 218 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 HLA-DQA1P01909 254 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 SMR3BP02814 79 aaPredicted RBP0.87□□□□□ -2.27
PRPF39-208ENST00000554785 SERPINE1P05121 402 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 TPM3P06753 285 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 OR8U9P0C7N5 309 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 LINC00032P0C843 101 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 LINC00869P0C866 280 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 SLC2A1P11166 492 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 CNTFRP26992 372 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 SERPINB1P30740 379 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 OPRK1P41145 380 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 RPS27P42677 84 aaKnown RBP0.87□□□□□ -2.27
PRPF39-208ENST00000554785 GABRA2P47869 451 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 POLR2HP52434 150 aaKnown RBP0.87□□□□□ -2.27
PRPF39-208ENST00000554785 COPZ1P61923 177 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 TPM4P67936 248 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 HBA1P69905 142 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 FUT5Q11128 374 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 NAB1Q13506 487 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 HES1Q14469 280 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 SLC36A2Q495M3 483 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 COX19Q49B96 90 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 SPIN4Q56A73 249 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF880Q6PDB4 577 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 CBLN2Q8IUK8 224 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 NKAIN4Q8IVV8 208 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 COMMD1Q8N668 190 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 KRTCAP2Q8N6L1 136 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF283Q8N7M2 679 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 SPERTQ8NA61 448 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 WFDC9Q8NEX5 89 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 OR52E5Q8NH55 327 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 OR2AE1Q8NHA4 323 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 NDNFQ8TB73 568 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 L3HYPDHQ96EM0 354 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 NRBF2Q96F24 287 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 OR10C1Q96KK4 312 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 SLC35G5Q96KT7 338 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF488Q96MN9 340 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 SDF2Q99470 211 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 NABP2Q9BQ15 211 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 TM2D3Q9BRN9 247 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 BCL2L14Q9BZR8 327 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 IQCGQ9H095 443 aaKnown RBP0.87□□□□□ -2.27
PRPF39-208ENST00000554785 NSRP1Q9H0G5 558 aaKnown RBP0.87□□□□□ -2.27
PRPF39-208ENST00000554785 OR52D1Q9H346 318 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 PIGUQ9H490 435 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 TUBA4BQ9H853 241 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 TMEM27Q9HBJ8 222 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 WFDC1Q9HC57 220 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 MRPL22Q9NWU5 206 aaKnown RBP0.87□□□□□ -2.27
PRPF39-208ENST00000554785 STK38LQ9Y2H1 464 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 RCL1Q9Y2P8 373 aaKnown RBP0.87□□□□□ -2.27
PRPF39-208ENST00000554785 KLK5Q9Y337 293 aaPredicted RBP0.87□□□□□ -2.27
PRPF39-208ENST00000554785 DNAH6Q9C0G6 4158 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 VPS13DQ5THJ4 4388 aa0.87□□□□□ -2.27
PRPF39-208ENST00000554785 IGHV3-72A0A0B4J1Y9 119 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 TRAV25A0A0B4J276 109 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 A0A0J9YXV3 536 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 C7orf66A4D0T2 115 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 A8MT66 165 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 SERPINE3A8MV23 424 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 MIF4GDA9UHW6 222 aaKnown RBP0.86□□□□□ -2.27
PRPF39-208ENST00000554785 IGLL5B9A064 214 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 H0YJW9 148 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 GABRPO00591 440 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 NME4O00746 187 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 CCNKO75909 580 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 SLC22A5O76082 557 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 IGHV3-11P01762 117 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 IFNA6P05013 189 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF688P0C7X2 276 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 UBCP0CG48 685 aaKnown RBP0.86□□□□□ -2.27
PRPF39-208ENST00000554785 RAB4AP20338 218 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 MAGEA3P43357 314 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 KIR3DL2P43630 455 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 EDDM3BP56851 147 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 UBE2MP61081 183 aaKnown RBP0.86□□□□□ -2.27
PRPF39-208ENST00000554785 ATP6V0D1P61421 351 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 NCALDP61601 193 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 RPL23P62829 140 aaKnown RBP0.86□□□□□ -2.27
PRPF39-208ENST00000554785 PSG4Q00888 419 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 EDDM3AQ14507 147 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 LTC4SQ16873 150 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 DEFB135Q30KP9 77 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms