RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 HSD17B13Q7Z5P4 300 aaPredicted RBP8.77□□□□□ -1.01
PABPN1-203ENST00000553960 OR2C3Q8N628 320 aa8.77□□□□□ -1.01
PABPN1-203ENST00000553960 PARD6GQ9BYG4 376 aaPredicted RBP8.77□□□□□ -1.01
PABPN1-203ENST00000553960 ARV1Q9H2C2 271 aa8.77□□□□□ -1.01
PABPN1-203ENST00000553960 TMEM140Q9NV12 185 aa8.77□□□□□ -1.01
PABPN1-203ENST00000553960 OR5AC2Q9NZP5 309 aa8.77□□□□□ -1.01
PABPN1-203ENST00000553960 CR1P17927 2039 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 FXYD6-FXYD2A0A087WZ82 144 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 CENPVL3A0A0U1RRI6 287 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 FNDC10F2Z333 226 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 ARPC5O15511 151 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 BCL2L11O43521 198 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 KBTBD11O94819 623 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 VENTXO95231 258 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 TMEM50AO95807 157 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 RPL12P30050 165 aaKnown RBP8.76□□□□□ -1.01
PABPN1-203ENST00000553960 COMPP49747 757 aaPredicted RBP8.76□□□□□ -1.01
PABPN1-203ENST00000553960 NKX2-5P52952 324 aaPredicted RBP8.76□□□□□ -1.01
PABPN1-203ENST00000553960 LINC00205P59089 165 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 RPL23AP62750 156 aaKnown RBP8.76□□□□□ -1.01
PABPN1-203ENST00000553960 OPCMLQ14982 345 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 KLK9Q2XQG4 91 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 Q5PR19 223 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 TMEM14EPQ6UXP3 125 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 UBAC2Q8NBM4 344 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 NRGNQ92686 78 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 GGACTQ9BVM4 153 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 HIPK2Q9H2X6 1198 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 PRDM13Q9H4Q3 707 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 NARFLQ9H6Q4 476 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 KLK9Q9UKQ9 250 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 U3KQ87 197 aa8.76□□□□□ -1.01
PABPN1-203ENST00000553960 CSPG4Q6UVK1 2322 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 IGHV1-69DA0A0B4J2H0 117 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 NPFFO15130 113 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 SHOXO15266 292 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 CHST1O43916 411 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 TSPAN9O75954 239 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 JTBO76095 146 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 IGHV1-69P01742 117 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 IGHV3-7P01780 117 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 OR9G9P0C7N8 305 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 VDAC2P45880 294 aaPredicted RBP8.75□□□□□ -1.01
PABPN1-203ENST00000553960 POLR2GP62487 172 aaKnown RBP eCLIP8.75□□□□□ -1.01
PABPN1-203ENST00000553960 IFITM2Q01629 132 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 DIAPH2-AS1Q14236 149 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 MRGPRG-AS1Q2M3A8 158 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 VMA21Q3ZAQ7 101 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 MMD2Q8IY49 270 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 TMEM252Q8N6L7 170 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 OR4A16Q8NH70 328 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 RNASE11Q8TAA1 199 aaKnown RBP8.75□□□□□ -1.01
PABPN1-203ENST00000553960 GRPEL2Q8TAA5 225 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 DCUN1D4Q92564 292 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 HARBI1Q96MB7 349 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 SIRT7Q9NRC8 400 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 NDUFA4L2Q9NRX3 87 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 ZNRD1Q9P1U0 126 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 AUP1Q9Y679 476 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 ABCA1O95477 2261 aa8.75□□□□□ -1.01
PABPN1-203ENST00000553960 WRBO00258 174 aa8.74□□□□□ -1.01
PABPN1-203ENST00000553960 SOX15O60248 233 aa8.74□□□□□ -1.01
PABPN1-203ENST00000553960 MOSP00540 346 aa8.74□□□□□ -1.01
PABPN1-203ENST00000553960 OR8U8P0C7N1 319 aa8.74□□□□□ -1.01
PABPN1-203ENST00000553960 SAA1P0DJI8 122 aaPredicted RBP8.74□□□□□ -1.01
PABPN1-203ENST00000553960 BRS3P32247 399 aa8.74□□□□□ -1.01
PABPN1-203ENST00000553960 SULT1A1P50225 295 aa8.74□□□□□ -1.01
PABPN1-203ENST00000553960 LGALS4P56470 323 aa8.74□□□□□ -1.01
PABPN1-203ENST00000553960 RPL8P62917 257 aaKnown RBP8.74□□□□□ -1.01
PABPN1-203ENST00000553960 RPP30P78346 268 aaKnown RBP8.74□□□□□ -1.01
PABPN1-203ENST00000553960 PRCDQ00LT1 54 aa8.74□□□□□ -1.01
PABPN1-203ENST00000553960 ATP6V1FQ16864 119 aa8.74□□□□□ -1.01
PABPN1-203ENST00000553960 TMEM249Q2WGJ8 235 aa8.74□□□□□ -1.01
PABPN1-203ENST00000553960 TEX261Q6UWH6 196 aa8.74□□□□□ -1.01
PABPN1-203ENST00000553960 ZNF114Q8NC26 417 aa8.74□□□□□ -1.01
PABPN1-203ENST00000553960 OR1L8Q8NGR8 309 aa8.74□□□□□ -1.01
PABPN1-203ENST00000553960 OR2T10Q8NGZ9 312 aa8.74□□□□□ -1.01
PABPN1-203ENST00000553960 ARPC5LQ9BPX5 153 aa8.74□□□□□ -1.01
PABPN1-203ENST00000553960 ARL6Q9H0F7 186 aa8.74□□□□□ -1.01
PABPN1-203ENST00000553960 CYTL1Q9NRR1 136 aa8.74□□□□□ -1.01
PABPN1-203ENST00000553960 ZNF580Q9UK33 172 aa8.74□□□□□ -1.01
PABPN1-203ENST00000553960 TCF19Q9Y242 345 aa8.74□□□□□ -1.01
PABPN1-203ENST00000553960 SIGLEC9Q9Y336 463 aa8.74□□□□□ -1.01
PABPN1-203ENST00000553960 CCDC168Q8NDH2 2452 aa8.74□□□□□ -1.01
PABPN1-203ENST00000553960 NAV3Q8IVL0 2385 aa8.73□□□□□ -1.01
PABPN1-203ENST00000553960 TET2Q6N021 2002 aaPredicted RBP8.73□□□□□ -1.01
PABPN1-203ENST00000553960 KANTRA0A1W2PQU2 76 aa8.73□□□□□ -1.01
PABPN1-203ENST00000553960 MSGN1A6NI15 193 aa8.73□□□□□ -1.01
PABPN1-203ENST00000553960 TIMM23O14925 209 aa8.73□□□□□ -1.01
PABPN1-203ENST00000553960 IGHV4-31P0DP07 118 aa8.73□□□□□ -1.01
PABPN1-203ENST00000553960 COX7A1P24310 79 aa8.73□□□□□ -1.01
PABPN1-203ENST00000553960 SAA4P35542 130 aa8.73□□□□□ -1.01
PABPN1-203ENST00000553960 AP2S1P53680 142 aaPredicted RBP8.73□□□□□ -1.01
PABPN1-203ENST00000553960 S100A10P60903 97 aa8.73□□□□□ -1.01
PABPN1-203ENST00000553960 RPS16P62249 146 aaKnown RBP8.73□□□□□ -1.01
PABPN1-203ENST00000553960 UBA52P62987 128 aaKnown RBP8.73□□□□□ -1.01
PABPN1-203ENST00000553960 PSG5Q15238 335 aa8.73□□□□□ -1.01
PABPN1-203ENST00000553960 PRSS8Q16651 343 aa8.73□□□□□ -1.01
PABPN1-203ENST00000553960 VWC2Q2TAL6 325 aa8.73□□□□□ -1.01
PABPN1-203ENST00000553960 LRRC37A5PQ49AS3 106 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms