RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 SRRM4A7MD48 611 aaKnown RBP10.39□□□□□ -0.75
VIPAS39-206ENST00000553888 CEBPZOSA8MTT3 80 aa10.39□□□□□ -0.75
VIPAS39-206ENST00000553888 HSD17B13Q7Z5P4 300 aaPredicted RBP10.39□□□□□ -0.75
VIPAS39-206ENST00000553888 GSN-AS1Q9NRJ2 163 aa10.39□□□□□ -0.75
VIPAS39-206ENST00000553888 FAM96BQ9Y3D0 163 aa10.39□□□□□ -0.75
VIPAS39-206ENST00000553888 PIGBOS1A0A0B4J2F0 54 aa10.39□□□□□ -0.75
VIPAS39-206ENST00000553888 IFNA17P01571 189 aa10.39□□□□□ -0.75
VIPAS39-206ENST00000553888 IGHV1-8P0DP01 117 aa10.39□□□□□ -0.75
VIPAS39-206ENST00000553888 THBS3P49746 956 aa10.39□□□□□ -0.75
VIPAS39-206ENST00000553888 BAXQ07812 192 aa10.39□□□□□ -0.75
VIPAS39-206ENST00000553888 BPIFCQ8NFQ6 507 aa10.39□□□□□ -0.75
VIPAS39-206ENST00000553888 OR4S2Q8NH73 311 aa10.39□□□□□ -0.75
VIPAS39-206ENST00000553888 IGFBPL1Q8WX77 278 aa10.39□□□□□ -0.75
VIPAS39-206ENST00000553888 RHOVQ96L33 236 aa10.39□□□□□ -0.75
VIPAS39-206ENST00000553888 ATP5SQ99766 215 aa10.39□□□□□ -0.75
VIPAS39-206ENST00000553888 RSG1Q9BU20 258 aa10.39□□□□□ -0.75
VIPAS39-206ENST00000553888 MS4A7Q9GZW8 240 aaPredicted RBP10.39□□□□□ -0.75
VIPAS39-206ENST00000553888 RPH3ALQ9UNE2 315 aa10.39□□□□□ -0.75
VIPAS39-206ENST00000553888 NDUFS8O00217 210 aa10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 NQO2P16083 231 aa10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 RELBQ01201 579 aa10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 ZNF616Q08AN1 781 aa10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 OR4A47Q6IF82 309 aa10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 OR10X1Q8NGY0 326 aa10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 OR2G3Q8NGZ4 309 aa10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 CELSR1Q9NYQ6 3014 aa10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 A0A1W2PPH5 198 aa10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 C22orf46C9J442 243 aa10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 J3QR06 171 aa10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 ATG12O94817 140 aa10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 MEOX2P50222 304 aa10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 ERVK-16P61578 105 aa10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 ZNF266Q14584 549 aa10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 EIF5AL1Q6IS14 154 aaKnown RBP10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 DTX2Q86UW9 622 aa10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 OR4A16Q8NH70 328 aa10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 NARS2Q96I59 477 aaKnown RBP10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 SLC35D1Q9NTN3 355 aa10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 DOPEY1Q5JWR5 2465 aa10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 SPG11Q96JI7 2443 aa10.38□□□□□ -0.75
VIPAS39-206ENST00000553888 FAM90A26D6RGX4 464 aa10.37□□□□□ -0.75
VIPAS39-206ENST00000553888 EIF3GO75821 320 aaKnown RBP eCLIP10.37□□□□□ -0.75
VIPAS39-206ENST00000553888 SEC11BP0C7V7 166 aa10.37□□□□□ -0.75
VIPAS39-206ENST00000553888 ZNF833PQ6ZTB9 187 aa10.37□□□□□ -0.75
VIPAS39-206ENST00000553888 ABHD12Q8N2K0 398 aa10.37□□□□□ -0.75
VIPAS39-206ENST00000553888 ZNF525Q8N782 197 aa10.37□□□□□ -0.75
VIPAS39-206ENST00000553888 CACFD1Q9UGQ2 172 aa10.37□□□□□ -0.75
VIPAS39-206ENST00000553888 FBXO7Q9Y3I1 522 aa10.37□□□□□ -0.75
VIPAS39-206ENST00000553888 IGHV3-72A0A0B4J1Y9 119 aa10.37□□□□□ -0.75
VIPAS39-206ENST00000553888 RBFOX2O43251 390 aaKnown RBP eCLIP10.37□□□□□ -0.75
VIPAS39-206ENST00000553888 PRH1P02810 166 aa10.37□□□□□ -0.75
VIPAS39-206ENST00000553888 WDR25Q64LD2 544 aaPredicted RBP10.37□□□□□ -0.75
VIPAS39-206ENST00000553888 OR13D1Q8NGV5 346 aa10.37□□□□□ -0.75
VIPAS39-206ENST00000553888 H7C2Y5 167 aa10.37□□□□□ -0.75
VIPAS39-206ENST00000553888 COX7A1P24310 79 aa10.37□□□□□ -0.75
VIPAS39-206ENST00000553888 BTNL8Q6UX41 500 aa10.37□□□□□ -0.75
VIPAS39-206ENST00000553888 TMEM14EPQ6UXP3 125 aa10.37□□□□□ -0.75
VIPAS39-206ENST00000553888 FAM213BQ8TBF2 198 aa10.37□□□□□ -0.75
VIPAS39-206ENST00000553888 CELSR2Q9HCU4 2923 aa10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 NAV3Q8IVL0 2385 aa10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 PPIAL4CA0A0B4J2A2 164 aa10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 UBE2L5PA0A1B0GUS4 154 aa10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 PPIAL4GP0DN37 164 aa10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 PAX6P26367 422 aa10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 CAMLGP49069 296 aa10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 HOXA1P49639 335 aaPredicted RBP10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 SLC38A11Q08AI6 406 aa10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 OR10A7Q8NGE5 316 aa10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 PMS2P5A8MQ11 134 aa10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 IGFBP2P18065 325 aa10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 AGAP20933 346 aa10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 ZP3P21754 424 aa10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 KIR2DS2P43631 304 aa10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 CDC34P49427 236 aaPredicted RBP10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 EIF4E3Q8N5X7 224 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 OR8B3Q8NGG8 313 aa10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 SAT2Q96F10 170 aaPredicted RBP10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 RITA1Q96K30 269 aa10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 OR8B2Q96RD0 313 aa10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 TMEM133Q9H2Q1 129 aa10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 VSIRQ9H7M9 311 aa10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 ONECUT1Q9UBC0 465 aa10.36□□□□□ -0.75
VIPAS39-206ENST00000553888 A6NNC1 897 aa10.35□□□□□ -0.75
VIPAS39-206ENST00000553888 H0YJW9 148 aa10.35□□□□□ -0.75
VIPAS39-206ENST00000553888 TAS2R30P59541 319 aa10.35□□□□□ -0.75
VIPAS39-206ENST00000553888 HINT2Q9BX68 163 aa10.35□□□□□ -0.75
VIPAS39-206ENST00000553888 MMP26Q9NRE1 261 aa10.35□□□□□ -0.75
VIPAS39-206ENST00000553888 C15orf62A8K5M9 175 aa10.35□□□□□ -0.75
VIPAS39-206ENST00000553888 TMEM30BQ3MIR4 351 aa10.35□□□□□ -0.75
VIPAS39-206ENST00000553888 NEIL1Q96FI4 390 aaPredicted RBP10.35□□□□□ -0.75
VIPAS39-206ENST00000553888 PARP11Q9NR21 331 aa10.35□□□□□ -0.75
VIPAS39-206ENST00000553888 STRAPQ9Y3F4 350 aaKnown RBP10.35□□□□□ -0.75
VIPAS39-206ENST00000553888 IGHV2-26A0A0B4J1V2 119 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 C9JQL5 133 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 RRHO14718 337 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 SAA1P0DJI8 122 aaPredicted RBP10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 TMEM170AQ8WVE7 144 aa10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 NEU4Q8WWR8 484 aaPredicted RBP10.34□□□□□ -0.75
VIPAS39-206ENST00000553888 RAB1CQ92928 201 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms