RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 SCCPDHQ8NBX0 429 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 FDCSPQ8NFU4 85 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 SGMS2Q8NHU3 365 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 GATAD1Q8WUU5 269 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 GMPPAQ96IJ6 420 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-207ENST00000553837 SLC25A22Q9H936 323 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 CLCF1Q9UBD9 225 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 RBM7Q9Y580 266 aaKnown RBP10.24□□□□□ -0.77
SHMT2-207ENST00000553837 CACNA1HO95180 2353 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 SPAARA0A1B0GVQ0 90 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 SIRPB1O00241 398 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 DEGS1O15121 323 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 TMPRSS2O15393 492 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 PDE6DO43924 150 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 PSG2P11465 335 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 CRISP2P16562 243 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 ERVK11-1P61568 191 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 MMDQ15546 238 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 IZUMO4Q1ZYL8 232 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 TBC1D28Q2M2D7 210 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 SPANXN5Q5MJ07 72 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 PIP4P1Q86T03 277 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 STPG4Q8N801 248 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 TMEM178AQ8NBL3 297 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 NANOS1Q8WY41 292 aaKnown RBP10.24□□□□□ -0.77
SHMT2-207ENST00000553837 ERRFI1Q9UJM3 462 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-207ENST00000553837 GRIFINA4D1Z8 144 aa10.23□□□□□ -0.77
SHMT2-207ENST00000553837 LRP5LA4QPB2 252 aa10.23□□□□□ -0.77
SHMT2-207ENST00000553837 C11orf94C9JXX5 98 aa10.23□□□□□ -0.77
SHMT2-207ENST00000553837 CDIPTO14735 213 aa10.23□□□□□ -0.77
SHMT2-207ENST00000553837 CDKN1AP38936 164 aa10.23□□□□□ -0.77
SHMT2-207ENST00000553837 ACSM6Q6P461 480 aa10.23□□□□□ -0.77
SHMT2-207ENST00000553837 VWA1Q6PCB0 445 aa10.23□□□□□ -0.77
SHMT2-207ENST00000553837 DEFB124Q8NES8 71 aa10.23□□□□□ -0.77
SHMT2-207ENST00000553837 SLC25A40Q8TBP6 338 aa10.23□□□□□ -0.77
SHMT2-207ENST00000553837 IL1F10Q8WWZ1 152 aa10.23□□□□□ -0.77
SHMT2-207ENST00000553837 CST9LQ9H4G1 147 aa10.23□□□□□ -0.77
SHMT2-207ENST00000553837 UQCR10Q9UDW1 63 aa10.23□□□□□ -0.77
SHMT2-207ENST00000553837 IL19Q9UHD0 177 aa10.23□□□□□ -0.77
SHMT2-207ENST00000553837 OR2W1Q9Y3N9 320 aa10.23□□□□□ -0.77
SHMT2-207ENST00000553837 GTF3C1Q12789 2109 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 C1QTNF9BB2RNN3 333 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 SERF1AO75920 110 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 OR2H2O95918 312 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 WNT2P09544 360 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 COX5AP20674 150 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 NPPCP23582 126 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 MPV17P39210 176 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 CEBPDP49716 269 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-207ENST00000553837 SUMO1P63165 101 aaKnown RBP10.22□□□□□ -0.77
SHMT2-207ENST00000553837 PSG7Q13046 419 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 MRPL49Q13405 166 aaKnown RBP10.22□□□□□ -0.77
SHMT2-207ENST00000553837 GABRA6Q16445 453 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 BAGE3Q86Y29 109 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 BAGE2Q86Y30 109 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 OR10V1Q8NGI7 309 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 OR51H1Q8NH63 302 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 TRIB1Q96RU8 372 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 SAMD10Q9BYL1 202 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 TP53TG3Q9ULZ0 132 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 LAMTOR2Q9Y2Q5 125 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 CHD3Q12873 2000 aaKnown RBP10.22□□□□□ -0.77
SHMT2-207ENST00000553837 LAMA5O15230 3695 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 GALR2O43603 387 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-207ENST00000553837 AGFG2O95081 481 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 IGKV1-39P01597 117 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 IGKV1D-39P04432 117 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 CDC34P49427 236 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-207ENST00000553837 GUSBP1Q15486 140 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 TCF23Q7RTU1 214 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 SIGLECL1Q8N7X8 197 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 SFRP2Q96HF1 295 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 RTL8AQ9BWD3 113 aa10.22□□□□□ -0.77
SHMT2-207ENST00000553837 TRAV9-1A0A075B6T8 112 aa10.21□□□□□ -0.77
SHMT2-207ENST00000553837 M0QZ24 198 aa10.21□□□□□ -0.77
SHMT2-207ENST00000553837 IGHG3P01860 377 aa10.21□□□□□ -0.77
SHMT2-207ENST00000553837 TFF1P04155 84 aa10.21□□□□□ -0.77
SHMT2-207ENST00000553837 KITLGP21583 273 aa10.21□□□□□ -0.77
SHMT2-207ENST00000553837 COMPP49747 757 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-207ENST00000553837 FAM53AQ6NSI3 398 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-207ENST00000553837 PRSS57Q6UWY2 283 aa10.21□□□□□ -0.77
SHMT2-207ENST00000553837 ZNF497Q6ZNH5 498 aa10.21□□□□□ -0.77
SHMT2-207ENST00000553837 ZNF709Q8N972 641 aa10.21□□□□□ -0.77
SHMT2-207ENST00000553837 CLUHP3Q96NS8 147 aa10.21□□□□□ -0.77
SHMT2-207ENST00000553837 CHODLQ9H9P2 273 aa10.21□□□□□ -0.77
SHMT2-207ENST00000553837 EP300Q09472 2414 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-207ENST00000553837 KIAA2026Q5HYC2 2103 aa10.21□□□□□ -0.77
SHMT2-207ENST00000553837 OTOGLQ3ZCN5 2332 aa10.21□□□□□ -0.78
SHMT2-207ENST00000553837 MDFIC2A0A1B0GVS7 189 aa10.21□□□□□ -0.78
SHMT2-207ENST00000553837 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.21□□□□□ -0.78
SHMT2-207ENST00000553837 GRPP07492 148 aa10.21□□□□□ -0.78
SHMT2-207ENST00000553837 FTH1P19P0C7X4 201 aa10.21□□□□□ -0.78
SHMT2-207ENST00000553837 S100A7P31151 101 aa10.21□□□□□ -0.78
SHMT2-207ENST00000553837 LINC00310P59036 64 aa10.21□□□□□ -0.78
SHMT2-207ENST00000553837 RHOGP84095 191 aa10.21□□□□□ -0.78
SHMT2-207ENST00000553837 Q0VG73 95 aa10.21□□□□□ -0.78
SHMT2-207ENST00000553837 SPATA45Q537H7 98 aa10.21□□□□□ -0.78
SHMT2-207ENST00000553837 FFAR4Q5NUL3 377 aa10.21□□□□□ -0.78
SHMT2-207ENST00000553837 LDLRAD2Q5SZI1 272 aa10.21□□□□□ -0.78
SHMT2-207ENST00000553837 TMEM14EPQ6UXP3 125 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms