RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 ZNF57Q68EA5 555 aaPredicted RBP8.09□□□□□ -1.11
TRAFD1-208ENST00000552890 UNQ5815/PRO19632Q6UWF5 114 aa8.09□□□□□ -1.11
TRAFD1-208ENST00000552890 MINDY2Q8NBR6 621 aa8.09□□□□□ -1.11
TRAFD1-208ENST00000552890 OR4C16Q8NGL9 310 aa8.09□□□□□ -1.11
TRAFD1-208ENST00000552890 RRNAD1Q96FB5 475 aaKnown RBP8.09□□□□□ -1.11
TRAFD1-208ENST00000552890 USMG5Q96IX5 58 aa8.09□□□□□ -1.11
TRAFD1-208ENST00000552890 UBE2E2Q96LR5 201 aa8.09□□□□□ -1.11
TRAFD1-208ENST00000552890 MCRIP2Q9BUT9 160 aaKnown RBP8.09□□□□□ -1.11
TRAFD1-208ENST00000552890 WDR12Q9GZL7 423 aaKnown RBP8.09□□□□□ -1.11
TRAFD1-208ENST00000552890 TINAGL1Q9GZM7 467 aaPredicted RBP8.09□□□□□ -1.11
TRAFD1-208ENST00000552890 THYN1Q9P016 225 aa8.09□□□□□ -1.11
TRAFD1-208ENST00000552890 VSIG4Q9Y279 399 aa8.09□□□□□ -1.11
TRAFD1-208ENST00000552890 NUBP2Q9Y5Y2 271 aa8.09□□□□□ -1.11
TRAFD1-208ENST00000552890 C3orf85A0A1B0GTC6 90 aa8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 MARCH11A6NNE9 402 aa8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 NUDT19A8MXV4 375 aa8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 ATP6V0E1O15342 81 aa8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 PF4P02776 101 aa8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 SAA1P0DJI8 122 aaPredicted RBP8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 HIST1H1BP16401 226 aaKnown RBP8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 HLA-GP17693 338 aa8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 RAB25P57735 213 aa8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 RPL23AP62750 156 aaKnown RBP8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 GNB1P62873 340 aa8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 RPL30P62888 115 aaKnown RBP8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 TNXAQ16473 311 aa8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 PHLDA2Q53GA4 152 aa8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 TREML4Q6UXN2 200 aa8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 H2BFWTQ7Z2G1 175 aa8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 TBC1D26Q86UD7 250 aa8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 ZNF695Q8IW36 515 aa8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 PUSL1Q8N0Z8 303 aaKnown RBP8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 OR51S1Q8NGJ8 323 aa8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 OR5B3Q8NH48 314 aa8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 R3HDM4Q96D70 268 aa8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 TMEM56Q96MV1 263 aa8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 HSPB9Q9BQS6 159 aa8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 FXYD6Q9H0Q3 95 aa8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 ZNF430Q9H8G1 570 aaPredicted RBP8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 V9GYH0 126 aa8.08□□□□□ -1.12
TRAFD1-208ENST00000552890 SRRM4A7MD48 611 aaKnown RBP8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 IGLV1-40P01703 118 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 CD28P10747 220 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 CNTFRP26992 372 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 PSMB8P28062 276 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 PPIFP30405 207 aaKnown RBP8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 LPAR6P43657 344 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 RPL27AP46776 148 aaKnown RBP8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 RUNX1Q01196 453 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 RBMS2Q15434 407 aaKnown RBP8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 ECSCRQ19T08 205 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 TRIM16LQ309B1 348 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 OR2B11Q5JQS5 317 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 OR4A47Q6IF82 309 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 Q6ZS46 218 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 OR1L8Q8NGR8 309 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 OR13C8Q8NGS7 320 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 OR4A16Q8NH70 328 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 GRPEL2Q8TAA5 225 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 C4orf3Q8WVX3 66 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 SRSF12Q8WXF0 261 aaKnown RBP8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 IL22RA2Q969J5 263 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 C5orf30Q96GV9 206 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 RITA1Q96K30 269 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 NOL4LQ96MY1 436 aaPredicted RBP8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 CLCC1Q96S66 551 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 CITED2Q99967 270 aaPredicted RBP8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 PDCD10Q9BUL8 212 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 SRRQ9GZT4 340 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 ZNF257Q9Y2Q1 563 aa8.07□□□□□ -1.12
TRAFD1-208ENST00000552890 C13orf42A0A1B0GVH6 325 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 A0A1W2PN81 502 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 MSGN1A6NI15 193 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 FAM223BA6NKX1 122 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 UPK2O00526 184 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 RBMXL2O75526 392 aaKnown RBP8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 KRASP01116 189 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 OR9G9P0C7N8 305 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 CHRNA7P36544 502 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 MYCNOSP40205 109 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 RAB9AP51151 201 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 AKR1C2P52895 323 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 PPP5CP53041 499 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 CFHR3Q02985 330 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 KLF9Q13886 244 aaPredicted RBP8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 TMEM95Q3KNT9 176 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 TMEM128Q5BJH2 165 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 MZT2BQ6NZ67 158 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 ZNF329Q86UD4 541 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 FAM223AQ8IWN6 122 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 LFNGQ8NES3 379 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 RNASE11Q8TAA1 199 aaKnown RBP8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 MARCH1Q8TCQ1 289 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 TRIM63Q969Q1 353 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 GALNT14Q96FL9 552 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 QTRT1Q9BXR0 403 aaKnown RBP8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 TMEM222Q9H0R3 208 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 NAA60Q9H7X0 242 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 ZNF355PQ9NSJ1 428 aa8.06□□□□□ -1.12
TRAFD1-208ENST00000552890 TMEM140Q9NV12 185 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms