RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 EWSR1Q01844 656 aaKnown RBP eCLIP9.11□□□□□ -0.95
CACNB3-224ENST00000552812 PRB3Q04118 309 aaPredicted RBP9.11□□□□□ -0.95
CACNB3-224ENST00000552812 EXOSC2Q13868 293 aaKnown RBP9.11□□□□□ -0.95
CACNB3-224ENST00000552812 DEFB113Q30KQ7 82 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 TPTE2P1Q5T6R2 138 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 MINOS1Q5TGZ0 78 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 OR8H3Q8N146 312 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 VSTM2AQ8TAG5 236 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 PHYHIPLQ96FC7 376 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 TMEM14BQ9NUH8 114 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 FOXA2Q9Y261 457 aaPredicted RBP9.11□□□□□ -0.95
CACNB3-224ENST00000552812 MINOS1-NBL1R4GNA1 71 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 FBN2P35556 2912 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 FAM24AA6NFZ4 105 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 RNASEK-C17orf49H0YIS7 233 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 CFDP00746 253 aaPredicted RBP9.11□□□□□ -0.95
CACNB3-224ENST00000552812 FGF2P09038 288 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 TPT1P13693 172 aaKnown RBP9.11□□□□□ -0.95
CACNB3-224ENST00000552812 USF1P22415 310 aaPredicted RBP9.11□□□□□ -0.95
CACNB3-224ENST00000552812 LGALS7P47929 136 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 SPCS3P61009 180 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 PAX8Q06710 450 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 KLRD1Q13241 179 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 PUSL1Q8N0Z8 303 aaKnown RBP9.11□□□□□ -0.95
CACNB3-224ENST00000552812 OR4A5Q8NH83 315 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 ST8SIA2Q92186 375 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 MBD6Q96DN6 1003 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 TBX15Q96SF7 602 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 QTRT1Q9BXR0 403 aaKnown RBP9.11□□□□□ -0.95
CACNB3-224ENST00000552812 MS4A7Q9GZW8 240 aaPredicted RBP9.11□□□□□ -0.95
CACNB3-224ENST00000552812 RBKSQ9H477 322 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 CYTL1Q9NRR1 136 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 FBXL17Q9UF56 701 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 UBQLN2Q9UHD9 624 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 PRNDQ9UKY0 176 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 ZNF257Q9Y2Q1 563 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 SPG11Q96JI7 2443 aa9.11□□□□□ -0.95
CACNB3-224ENST00000552812 A0A1W2PPI3 338 aa9.1□□□□□ -0.95
CACNB3-224ENST00000552812 IGSF23A1L1A6 192 aa9.1□□□□□ -0.95
CACNB3-224ENST00000552812 SRRM4A7MD48 611 aaKnown RBP9.1□□□□□ -0.95
CACNB3-224ENST00000552812 UPK2O00526 184 aa9.1□□□□□ -0.95
CACNB3-224ENST00000552812 JTBO76095 146 aa9.1□□□□□ -0.95
CACNB3-224ENST00000552812 SPDEFO95238 335 aa9.1□□□□□ -0.95
CACNB3-224ENST00000552812 IFNA17P01571 189 aa9.1□□□□□ -0.95
CACNB3-224ENST00000552812 SAA1P0DJI8 122 aaPredicted RBP9.1□□□□□ -0.95
CACNB3-224ENST00000552812 UBE2E1P51965 193 aa9.1□□□□□ -0.95
CACNB3-224ENST00000552812 OR2B8PP59922 312 aa9.1□□□□□ -0.95
CACNB3-224ENST00000552812 RPS16P62249 146 aaKnown RBP9.1□□□□□ -0.95
CACNB3-224ENST00000552812 HABP2Q14520 560 aaPredicted RBP9.1□□□□□ -0.95
CACNB3-224ENST00000552812 CCDC144NLQ6NUI1 221 aa9.1□□□□□ -0.95
CACNB3-224ENST00000552812 MOB3BQ86TA1 216 aa9.1□□□□□ -0.95
CACNB3-224ENST00000552812 STX12Q86Y82 276 aa9.1□□□□□ -0.95
CACNB3-224ENST00000552812 DTD1Q8TEA8 209 aa9.1□□□□□ -0.95
CACNB3-224ENST00000552812 RNF5Q99942 180 aa9.1□□□□□ -0.95
CACNB3-224ENST00000552812 FKBP11Q9NYL4 201 aa9.1□□□□□ -0.95
CACNB3-224ENST00000552812 PSENENQ9NZ42 101 aa9.1□□□□□ -0.95
CACNB3-224ENST00000552812 TBL2Q9Y4P3 447 aaKnown RBP9.1□□□□□ -0.95
CACNB3-224ENST00000552812 TACC2O95359 2948 aa9.1□□□□□ -0.95
CACNB3-224ENST00000552812 TENM4Q6N022 2769 aa9.09□□□□□ -0.95
CACNB3-224ENST00000552812 CEBPZOSA8MTT3 80 aa9.09□□□□□ -0.95
CACNB3-224ENST00000552812 KBTBD11O94819 623 aa9.09□□□□□ -0.95
CACNB3-224ENST00000552812 MSMBP08118 114 aa9.09□□□□□ -0.95
CACNB3-224ENST00000552812 IAPPP10997 89 aa9.09□□□□□ -0.95
CACNB3-224ENST00000552812 SULT1A1P50225 295 aa9.09□□□□□ -0.95
CACNB3-224ENST00000552812 LGALS4P56470 323 aa9.09□□□□□ -0.95
CACNB3-224ENST00000552812 NHLH2Q02577 135 aa9.09□□□□□ -0.95
CACNB3-224ENST00000552812 VMA21Q3ZAQ7 101 aa9.09□□□□□ -0.95
CACNB3-224ENST00000552812 LDLRAD2Q5SZI1 272 aa9.09□□□□□ -0.95
CACNB3-224ENST00000552812 BAP18Q8IXM2 172 aa9.09□□□□□ -0.95
CACNB3-224ENST00000552812 UBAC2Q8NBM4 344 aa9.09□□□□□ -0.95
CACNB3-224ENST00000552812 SCARB1Q8WTV0 552 aa9.09□□□□□ -0.95
CACNB3-224ENST00000552812 C1orf159Q96HA4 380 aa9.09□□□□□ -0.95
CACNB3-224ENST00000552812 LPAR2Q9HBW0 351 aa9.09□□□□□ -0.95
CACNB3-224ENST00000552812 ITGB1BP2Q9UKP3 347 aa9.09□□□□□ -0.95
CACNB3-224ENST00000552812 TRAV3A0A0B4J244 114 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 B4DSR2 109 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 SCAF4O95104 1147 aaKnown RBP9.08□□□□□ -0.96
CACNB3-224ENST00000552812 IGLV2-23P01705 113 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 CD1BP29016 333 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 HSPE1P61604 102 aaKnown RBP9.08□□□□□ -0.96
CACNB3-224ENST00000552812 ZNF266Q14584 549 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 NDUFA5Q16718 116 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 STPG2Q8N412 459 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 OR5B3Q8NH48 314 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 TMEM167AQ8TBQ9 72 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 CLCC1Q96S66 551 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 NUP50Q9UKX7 468 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 TCF19Q9Y242 345 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 DOPEY2Q9Y3R5 2298 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 A0A096LNT2 108 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 BORCS7-ASMTA0A0B4J1R7 106 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 IGHV3-72A0A0B4J1Y9 119 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 H3BP45 60 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 TIMM23O14925 209 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 GATA3P23771 443 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 SPANXN5Q5MJ07 72 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 PRSS57Q6UWY2 283 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 ALKAL2Q6UX46 152 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 TMEM14EPQ6UXP3 125 aa9.08□□□□□ -0.96
CACNB3-224ENST00000552812 LHFPL4Q7Z7J7 247 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms