RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 TBC1D26Q86UD7 250 aa8.32□□□□□ -1.08
PTCH1-225ENST00000551845 OR5M8Q8NGP6 311 aa8.32□□□□□ -1.08
PTCH1-225ENST00000551845 OR4A5Q8NH83 315 aa8.32□□□□□ -1.08
PTCH1-225ENST00000551845 GRPEL2Q8TAA5 225 aa8.32□□□□□ -1.08
PTCH1-225ENST00000551845 TMEM167AQ8TBQ9 72 aa8.32□□□□□ -1.08
PTCH1-225ENST00000551845 SCGB3A2Q96PL1 93 aa8.32□□□□□ -1.08
PTCH1-225ENST00000551845 PHB2Q99623 299 aa8.32□□□□□ -1.08
PTCH1-225ENST00000551845 HRASLSQ9HDD0 168 aa8.32□□□□□ -1.08
PTCH1-225ENST00000551845 BATF3Q9NR55 127 aa8.32□□□□□ -1.08
PTCH1-225ENST00000551845 TPSG1Q9NRR2 321 aa8.32□□□□□ -1.08
PTCH1-225ENST00000551845 FAM212BQ9NTI7 297 aaPredicted RBP8.32□□□□□ -1.08
PTCH1-225ENST00000551845 MCUBQ9NWR8 336 aa8.32□□□□□ -1.08
PTCH1-225ENST00000551845 COPZ2Q9P299 210 aa8.32□□□□□ -1.08
PTCH1-225ENST00000551845 NUDT19A8MXV4 375 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 KBTBD11O94819 623 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 IGLV1-40P01703 118 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 RPLP1P05386 114 aaKnown RBP8.31□□□□□ -1.08
PTCH1-225ENST00000551845 CTSDP07339 412 aaPredicted RBP8.31□□□□□ -1.08
PTCH1-225ENST00000551845 PF4V1P10720 104 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 PSMB8P28062 276 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 SLC6A1P30531 599 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 MAS1LP35410 378 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 CDX1P47902 265 aaPredicted RBP8.31□□□□□ -1.08
PTCH1-225ENST00000551845 INPP1P49441 399 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 PIGPP57054 158 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 ERVK-16P61578 105 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 RND3P61587 244 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 RPL23AP62750 156 aaKnown RBP8.31□□□□□ -1.08
PTCH1-225ENST00000551845 NDPQ00604 133 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 ZNF45Q02386 682 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 SURF2Q15527 256 aaPredicted RBP8.31□□□□□ -1.08
PTCH1-225ENST00000551845 ZNF79Q15937 498 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 FAAP20Q6NZ36 180 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 PUSL1Q8N0Z8 303 aaKnown RBP8.31□□□□□ -1.08
PTCH1-225ENST00000551845 RNF152Q8N8N0 203 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 GDPD1Q8N9F7 314 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 CCDC71LQ8N9Z2 235 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 DMBX1Q8NFW5 382 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 OR51S1Q8NGJ8 323 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 OR4C16Q8NGL9 310 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 MARCH1Q8TCQ1 289 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 DEDD2Q8WXF8 326 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 SPIN2AQ99865 258 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 SPIN2BQ9BPZ2 258 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 ZNF430Q9H8G1 570 aaPredicted RBP8.31□□□□□ -1.08
PTCH1-225ENST00000551845 SLC2A9Q9NRM0 540 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 ZNF355PQ9NSJ1 428 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 BET1LQ9NYM9 111 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 COMMD9Q9P000 198 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 GPR132Q9UNW8 380 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 C14orf166Q9Y224 244 aaKnown RBP8.31□□□□□ -1.08
PTCH1-225ENST00000551845 FOXA2Q9Y261 457 aaPredicted RBP8.31□□□□□ -1.08
PTCH1-225ENST00000551845 FBXO7Q9Y3I1 522 aa8.31□□□□□ -1.08
PTCH1-225ENST00000551845 ADARB2-AS1A8MUL3 147 aa8.3□□□□□ -1.08
PTCH1-225ENST00000551845 KRASP01116 189 aa8.3□□□□□ -1.08
PTCH1-225ENST00000551845 SERPINE2P07093 398 aa8.3□□□□□ -1.08
PTCH1-225ENST00000551845 PI3P19957 117 aa8.3□□□□□ -1.08
PTCH1-225ENST00000551845 PPP5CP53041 499 aa8.3□□□□□ -1.08
PTCH1-225ENST00000551845 RPL8P62917 257 aaKnown RBP8.3□□□□□ -1.08
PTCH1-225ENST00000551845 POU2AF1Q16633 256 aa8.3□□□□□ -1.08
PTCH1-225ENST00000551845 MRGPRG-AS1Q2M3A8 158 aa8.3□□□□□ -1.08
PTCH1-225ENST00000551845 ZNF585BQ52M93 769 aa8.3□□□□□ -1.08
PTCH1-225ENST00000551845 ZNF57Q68EA5 555 aaPredicted RBP8.3□□□□□ -1.08
PTCH1-225ENST00000551845 OR4A47Q6IF82 309 aa8.3□□□□□ -1.08
PTCH1-225ENST00000551845 ZNF695Q8IW36 515 aa8.3□□□□□ -1.08
PTCH1-225ENST00000551845 OR5T1Q8NG75 326 aa8.3□□□□□ -1.08
PTCH1-225ENST00000551845 OR13C8Q8NGS7 320 aa8.3□□□□□ -1.08
PTCH1-225ENST00000551845 SRSF12Q8WXF0 261 aaKnown RBP8.3□□□□□ -1.08
PTCH1-225ENST00000551845 UBE2E2Q96LR5 201 aa8.3□□□□□ -1.08
PTCH1-225ENST00000551845 SRRQ9GZT4 340 aa8.3□□□□□ -1.08
PTCH1-225ENST00000551845 KLK15Q9H2R5 256 aa8.3□□□□□ -1.08
PTCH1-225ENST00000551845 TEX13DA0A0J9YY54 714 aaPredicted RBP8.29□□□□□ -1.08
PTCH1-225ENST00000551845 C3orf85A0A1B0GTC6 90 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 MARCH11A6NNE9 402 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 UPK2O00526 184 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 B3GALNT1O75752 331 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 SNAPC5O75971 98 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 ATG12O94817 140 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 S1PR2O95136 353 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 TSPAN15O95858 294 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 PF4P02776 101 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 IL6RP08887 468 aaPredicted RBP8.29□□□□□ -1.08
PTCH1-225ENST00000551845 RPA2P15927 270 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 HLA-GP17693 338 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 MYCNOSP40205 109 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 SSBP2P81877 361 aaPredicted RBP8.29□□□□□ -1.08
PTCH1-225ENST00000551845 KLF9Q13886 244 aaPredicted RBP8.29□□□□□ -1.08
PTCH1-225ENST00000551845 CNPY1Q3B7I2 92 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 C19orf54Q5BKX5 351 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 TRIQKQ629K1 86 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 LINC00299Q6ZSB3 139 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 LCNL1Q6ZST4 164 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 C1QL4Q86Z23 238 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 CADM3Q8N126 398 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 ZNF491Q8N8L2 437 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 KLHL30-AS1Q8NEE0 82 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 MS4A10Q96PG2 267 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 RTBDNQ9BSG5 229 aaPredicted RBP8.29□□□□□ -1.08
PTCH1-225ENST00000551845 COMMD5Q9GZQ3 224 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 SLA2Q9H6Q3 261 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms