RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 GPHA2Q96T91 129 aa8.61□□□□□ -1.03
SMARCD1-208ENST00000550280 GINS4Q9BRT9 223 aa8.61□□□□□ -1.03
SMARCD1-208ENST00000550280 ST6GALNAC5Q9BVH7 336 aa8.61□□□□□ -1.03
SMARCD1-208ENST00000550280 GGTLC1Q9BX51 225 aa8.61□□□□□ -1.03
SMARCD1-208ENST00000550280 OR51E2Q9H255 320 aa8.61□□□□□ -1.03
SMARCD1-208ENST00000550280 RBMX2Q9Y388 322 aaKnown RBP8.61□□□□□ -1.03
SMARCD1-208ENST00000550280 RBM7Q9Y580 266 aaKnown RBP8.61□□□□□ -1.03
SMARCD1-208ENST00000550280 IFITM5A6NNB3 132 aa8.6□□□□□ -1.03
SMARCD1-208ENST00000550280 KBTBD11O94819 623 aa8.6□□□□□ -1.03
SMARCD1-208ENST00000550280 HLA-DQB1P01920 261 aa8.6□□□□□ -1.03
SMARCD1-208ENST00000550280 C8orf88P0DMB2 117 aa8.6□□□□□ -1.03
SMARCD1-208ENST00000550280 CTRB1P17538 263 aa8.6□□□□□ -1.03
SMARCD1-208ENST00000550280 ARL3P36405 182 aa8.6□□□□□ -1.03
SMARCD1-208ENST00000550280 ZNF57Q68EA5 555 aaPredicted RBP8.6□□□□□ -1.03
SMARCD1-208ENST00000550280 CTRB2Q6GPI1 263 aa8.6□□□□□ -1.03
SMARCD1-208ENST00000550280 KCTD9Q7L273 389 aa8.6□□□□□ -1.03
SMARCD1-208ENST00000550280 SLC16A13Q7RTY0 426 aa8.6□□□□□ -1.03
SMARCD1-208ENST00000550280 WFDC3Q8IUB2 231 aa8.6□□□□□ -1.03
SMARCD1-208ENST00000550280 SLC2A9Q9NRM0 540 aa8.6□□□□□ -1.03
SMARCD1-208ENST00000550280 IGLV11-55A0A075B6I3 123 aa8.59□□□□□ -1.03
SMARCD1-208ENST00000550280 LOC102724200A0A096LPH7 203 aaPredicted RBP8.59□□□□□ -1.03
SMARCD1-208ENST00000550280 ACTL6BO94805 426 aa8.59□□□□□ -1.03
SMARCD1-208ENST00000550280 S1PR2O95136 353 aa8.59□□□□□ -1.03
SMARCD1-208ENST00000550280 REG1AP05451 166 aa8.59□□□□□ -1.03
SMARCD1-208ENST00000550280 RAB6AP20340 208 aa8.59□□□□□ -1.03
SMARCD1-208ENST00000550280 PSMB6P28072 239 aa8.59□□□□□ -1.03
SMARCD1-208ENST00000550280 RPL27AP46776 148 aaKnown RBP8.59□□□□□ -1.03
SMARCD1-208ENST00000550280 MRPS15P82914 257 aaKnown RBP8.59□□□□□ -1.03
SMARCD1-208ENST00000550280 TNFRSF9Q07011 255 aa8.59□□□□□ -1.03
SMARCD1-208ENST00000550280 FAM209BQ5JX69 171 aa8.59□□□□□ -1.03
SMARCD1-208ENST00000550280 LYG2Q86SG7 212 aa8.59□□□□□ -1.03
SMARCD1-208ENST00000550280 OR52B4Q8NGK2 314 aa8.59□□□□□ -1.03
SMARCD1-208ENST00000550280 ZNF414Q96IQ9 312 aa8.59□□□□□ -1.03
SMARCD1-208ENST00000550280 FYTTD1Q96QD9 318 aaKnown RBP8.59□□□□□ -1.03
SMARCD1-208ENST00000550280 MGLLQ99685 303 aa8.59□□□□□ -1.03
SMARCD1-208ENST00000550280 OR2W1Q9Y3N9 320 aa8.59□□□□□ -1.03
SMARCD1-208ENST00000550280 FAT2Q9NYQ8 4349 aa8.58□□□□□ -1.04
SMARCD1-208ENST00000550280 IGHV3-35A0A0C4DH35 117 aa8.58□□□□□ -1.04
SMARCD1-208ENST00000550280 ZNF320A2RRD8 509 aa8.58□□□□□ -1.04
SMARCD1-208ENST00000550280 CXorf65A6NEN9 183 aa8.58□□□□□ -1.04
SMARCD1-208ENST00000550280 EBAG9O00559 213 aa8.58□□□□□ -1.04
SMARCD1-208ENST00000550280 SSX5O60225 188 aa8.58□□□□□ -1.04
SMARCD1-208ENST00000550280 DEDDO75618 318 aa8.58□□□□□ -1.04
SMARCD1-208ENST00000550280 DTYMKP23919 212 aa8.58□□□□□ -1.04
SMARCD1-208ENST00000550280 PSMA1P25786 263 aaKnown RBP8.58□□□□□ -1.04
SMARCD1-208ENST00000550280 AQP4P55087 323 aa8.58□□□□□ -1.04
SMARCD1-208ENST00000550280 ARFRP1Q13795 201 aa8.58□□□□□ -1.04
SMARCD1-208ENST00000550280 TRAM1Q15629 374 aa8.58□□□□□ -1.04
SMARCD1-208ENST00000550280 ZNF773Q6PK81 442 aa8.58□□□□□ -1.04
SMARCD1-208ENST00000550280 CEMP1Q6PRD7 247 aaPredicted RBP8.58□□□□□ -1.04
SMARCD1-208ENST00000550280 SLC25A42Q86VD7 318 aa8.58□□□□□ -1.04
SMARCD1-208ENST00000550280 NUDCD2Q8WVJ2 157 aa8.58□□□□□ -1.04
SMARCD1-208ENST00000550280 NRG4Q8WWG1 115 aa8.58□□□□□ -1.04
SMARCD1-208ENST00000550280 OR2A7Q96R45 310 aa8.58□□□□□ -1.04
SMARCD1-208ENST00000550280 DCUN1D5Q9BTE7 237 aa8.58□□□□□ -1.04
SMARCD1-208ENST00000550280 SCN3BQ9NY72 215 aa8.58□□□□□ -1.04
SMARCD1-208ENST00000550280 DNAH2Q9P225 4427 aa8.57□□□□□ -1.04
SMARCD1-208ENST00000550280 TRAV1-2A0A0B4J238 106 aa8.57□□□□□ -1.04
SMARCD1-208ENST00000550280 TRAV3A0A0B4J244 114 aa8.57□□□□□ -1.04
SMARCD1-208ENST00000550280 SMIM30A4D0T7 59 aa8.57□□□□□ -1.04
SMARCD1-208ENST00000550280 RGS10O43665 173 aa8.57□□□□□ -1.04
SMARCD1-208ENST00000550280 CREBL2O60519 120 aaPredicted RBP8.57□□□□□ -1.04
SMARCD1-208ENST00000550280 CLEC3BP05452 202 aa8.57□□□□□ -1.04
SMARCD1-208ENST00000550280 CRHBPP24387 322 aa8.57□□□□□ -1.04
SMARCD1-208ENST00000550280 GADD45AP24522 165 aa8.57□□□□□ -1.04
SMARCD1-208ENST00000550280 DEFB135Q30KP9 77 aa8.57□□□□□ -1.04
SMARCD1-208ENST00000550280 ODF3L2Q3SX64 289 aa8.57□□□□□ -1.04
SMARCD1-208ENST00000550280 CDNFQ49AH0 187 aa8.57□□□□□ -1.04
SMARCD1-208ENST00000550280 SSX9Q7RTT3 188 aa8.57□□□□□ -1.04
SMARCD1-208ENST00000550280 MFSD4AQ8N468 514 aa8.57□□□□□ -1.04
SMARCD1-208ENST00000550280 ZNF502Q8TBZ5 544 aa8.57□□□□□ -1.04
SMARCD1-208ENST00000550280 EEF1AKMT3Q96AZ1 226 aa8.57□□□□□ -1.04
SMARCD1-208ENST00000550280 ACOT13Q9NPJ3 140 aa8.57□□□□□ -1.04
SMARCD1-208ENST00000550280 UBQLN2Q9UHD9 624 aa8.57□□□□□ -1.04
SMARCD1-208ENST00000550280 SPATA2Q9UM82 520 aa8.57□□□□□ -1.04
SMARCD1-208ENST00000550280 IGLC7A0M8Q6 106 aa8.56□□□□□ -1.04
SMARCD1-208ENST00000550280 NUPR2A6NF83 97 aa8.56□□□□□ -1.04
SMARCD1-208ENST00000550280 PTHLHP12272 177 aa8.56□□□□□ -1.04
SMARCD1-208ENST00000550280 GPR183P32249 361 aa8.56□□□□□ -1.04
SMARCD1-208ENST00000550280 OR2B8PP59922 312 aa8.56□□□□□ -1.04
SMARCD1-208ENST00000550280 FAM106AQ4KMX7 169 aa8.56□□□□□ -1.04
SMARCD1-208ENST00000550280 ZNF585BQ52M93 769 aa8.56□□□□□ -1.04
SMARCD1-208ENST00000550280 HACD4Q5VWC8 232 aa8.56□□□□□ -1.04
SMARCD1-208ENST00000550280 Q6ZWC4 215 aa8.56□□□□□ -1.04
SMARCD1-208ENST00000550280 PRSS48Q7RTY5 328 aa8.56□□□□□ -1.04
SMARCD1-208ENST00000550280 OR4S2Q8NH73 311 aa8.56□□□□□ -1.04
SMARCD1-208ENST00000550280 TCTEX1D2Q8WW35 142 aa8.56□□□□□ -1.04
SMARCD1-208ENST00000550280 TAS2R8Q9NYW2 309 aa8.56□□□□□ -1.04
SMARCD1-208ENST00000550280 TP53TG1Q9Y2A0 90 aa8.56□□□□□ -1.04
SMARCD1-208ENST00000550280 MRPS7Q9Y2R9 242 aaKnown RBP8.56□□□□□ -1.04
SMARCD1-208ENST00000550280 PRELID3BQ9Y3B1 194 aa8.56□□□□□ -1.04
SMARCD1-208ENST00000550280 DYNC1H1Q14204 4646 aaKnown RBP8.56□□□□□ -1.04
SMARCD1-208ENST00000550280 TRAV25A0A0B4J276 109 aa8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 TMEM235A6NFC5 223 aa8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 SPRY2O43597 315 aa8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 CD36P16671 472 aa8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 HLA-GP17693 338 aa8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 RAB3BP20337 219 aa8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 MAS1LP35410 378 aa8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 TALDO1P37837 337 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms