RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 SLC25A17O43808 307 aa7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 RAMP3O60896 148 aa7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 KBTBD11O94819 623 aa7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 LY86O95711 162 aa7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 HLA-DRB1P01911 266 aa7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 SUPT4H1P63272 117 aaKnown RBP7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 HNF4GQ14541 408 aa7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 PSG5Q15238 335 aa7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 LY6EQ16553 131 aa7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 ZNF585BQ52M93 769 aa7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 C12orf45Q8N5I9 185 aaPredicted RBP7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 FAM71E2Q8N5Q1 922 aa7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 C5orf56Q8N8D9 126 aa7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 OR4A16Q8NH70 328 aa7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 TMEM167AQ8TBQ9 72 aa7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 CASTOR1Q8WTX7 329 aa7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 TMEM68Q96MH6 324 aa7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 SRSF8Q9BRL6 282 aaKnown RBP7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 CHIAQ9BZP6 476 aa7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 TMEM140Q9NV12 185 aa7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 COA4Q9NYJ1 87 aa7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 SIGLEC9Q9Y336 463 aa7.8□□□□□ -1.16
SMARCD1-206ENST00000549274 A0A1B0GU03 582 aa7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 TMEM238LA0A1B0GVL6 79 aa7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 CYB5BO43169 146 aa7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 RBMXL2O75526 392 aaKnown RBP7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 TSPAN9O75954 239 aa7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 KRASP01116 189 aa7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 SAA1P0DJI8 122 aaPredicted RBP7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 RPL8P62917 257 aaKnown RBP7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 TMEM267Q0VDI3 215 aaPredicted RBP7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 TATDN3Q17R31 274 aa7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 SP6Q3SY56 376 aa7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 ARSJQ5FYB0 599 aaPredicted RBP7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 ZNF562Q6V9R5 426 aa7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 HSD17B13Q7Z5P4 300 aaPredicted RBP7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 TMEM219Q86XT9 240 aa7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 FOXRED2Q8IWF2 684 aa7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 SELENOHQ8IZQ5 122 aaKnown RBP7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 PUSL1Q8N0Z8 303 aaKnown RBP7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 Q8N9W7 124 aa7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 OR5B3Q8NH48 314 aa7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 ASB13Q8WXK3 278 aa7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 SEC22AQ96IW7 307 aa7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 GPHA2Q96T91 129 aa7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 COMMD5Q9GZQ3 224 aa7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 ZFP57Q9NU63 452 aa7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 ZNF580Q9UK33 172 aa7.79□□□□□ -1.16
SMARCD1-206ENST00000549274 C7orf66A4D0T2 115 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 C15orf61A6NNL5 157 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 FAM90A26D6RGX4 464 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 SSNA1O43805 119 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 MED6O75586 246 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 NDUFA7O95182 113 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 CNIH1O95406 144 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 IGLV2-23P01705 113 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 SULT1A3P0DMM9 295 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 SULT1A4P0DMN0 295 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 VSIG10L2P0DP72 767 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 CD24P25063 80 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 PAX6P26367 422 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 G6PCP35575 357 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 BRWD1-AS2P59051 145 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 LINC00205P59089 165 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 CYCSP99999 105 aaKnown RBP7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 SMCO1Q147U7 214 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 PRSS8Q16651 343 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 C21orf62-AS1Q17RA5 79 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 OR4A47Q6IF82 309 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 ZNF429Q86V71 674 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 SLC35G3Q8N808 338 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 OR4F5Q8NH21 305 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 OR2T6Q8NHC8 308 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 CLCC1Q96S66 551 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 FBXL15Q9H469 300 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 PLSCR3Q9NRY6 295 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 FOXA2Q9Y261 457 aaPredicted RBP7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 ZNF257Q9Y2Q1 563 aa7.78□□□□□ -1.16
SMARCD1-206ENST00000549274 NIPBLQ6KC79 2804 aaeCLIP7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 A0A1W2PN81 502 aa7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 AP4M1O00189 453 aa7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 UPK2O00526 184 aa7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 IGHG2P01859 326 aa7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 CRYGBP07316 175 aa7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 HLA-GP17693 338 aa7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 CHRNA7P36544 502 aa7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 COMPP49747 757 aaPredicted RBP7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 F2RL1P55085 397 aa7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 TMEM95Q3KNT9 176 aa7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 ANKRD55Q3KP44 614 aa7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 NMSQ5H8A3 153 aa7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 GSG1LQ6UXU4 331 aa7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 SSX9Q7RTT3 188 aa7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 SLC35E3Q7Z769 313 aa7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 OR1L8Q8NGR8 309 aa7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 OR52E5Q8NH55 327 aa7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 ARPC1AQ92747 370 aa7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 OR51J1Q9H342 316 aa7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 BEX1Q9HBH7 125 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms