RNA–Protein interactions for RNA: ENST00000548279.5

CACNB3-208, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-208ENST00000548279 TTC9CQ8N5M4 171 aa17.69■□□□□ 0.42
CACNB3-208ENST00000548279 ZBTB34Q8NCN2 500 aa17.69■□□□□ 0.42
CACNB3-208ENST00000548279 VSTM2AQ8TAG5 236 aa17.69■□□□□ 0.42
CACNB3-208ENST00000548279 USMG5Q96IX5 58 aa17.69■□□□□ 0.42
CACNB3-208ENST00000548279 SORL1Q92673 2214 aa17.68■□□□□ 0.42
CACNB3-208ENST00000548279 TRBV9A0A0B4J1U6 114 aa17.68■□□□□ 0.42
CACNB3-208ENST00000548279 ZP3P21754 424 aa17.68■□□□□ 0.42
CACNB3-208ENST00000548279 GNRHRP30968 328 aa17.68■□□□□ 0.42
CACNB3-208ENST00000548279 PRSS3P35030 304 aa17.68■□□□□ 0.42
CACNB3-208ENST00000548279 RPL27AP46776 148 aaKnown RBP17.68■□□□□ 0.42
CACNB3-208ENST00000548279 KLF5Q13887 457 aaPredicted RBP17.68■□□□□ 0.42
CACNB3-208ENST00000548279 PEF1Q9UBV8 284 aaKnown RBP17.68■□□□□ 0.42
CACNB3-208ENST00000548279 CGB1A6NKQ9 187 aa17.67■□□□□ 0.42
CACNB3-208ENST00000548279 RBFOX2O43251 390 aaKnown RBP eCLIP17.67■□□□□ 0.42
CACNB3-208ENST00000548279 HPGDSO60760 199 aa17.67■□□□□ 0.42
CACNB3-208ENST00000548279 HRASP01112 189 aa17.67■□□□□ 0.42
CACNB3-208ENST00000548279 ELK1P19419 428 aa17.67■□□□□ 0.42
CACNB3-208ENST00000548279 CTF1Q16619 201 aa17.67■□□□□ 0.42
CACNB3-208ENST00000548279 OR4A47Q6IF82 309 aa17.67■□□□□ 0.42
CACNB3-208ENST00000548279 DHRS11Q6UWP2 260 aa17.67■□□□□ 0.42
CACNB3-208ENST00000548279 LYSMD2Q8IV50 215 aa17.67■□□□□ 0.42
CACNB3-208ENST00000548279 OR51H1Q8NH63 302 aa17.67■□□□□ 0.42
CACNB3-208ENST00000548279 GPX8Q8TED1 209 aa17.67■□□□□ 0.42
CACNB3-208ENST00000548279 MOB3AQ96BX8 217 aa17.67■□□□□ 0.42
CACNB3-208ENST00000548279 FYTTD1Q96QD9 318 aaKnown RBP17.67■□□□□ 0.42
CACNB3-208ENST00000548279 OR4C12Q96R67 309 aa17.67■□□□□ 0.42
CACNB3-208ENST00000548279 ZNF2Q9BSG1 426 aaPredicted RBP17.67■□□□□ 0.42
CACNB3-208ENST00000548279 FXYD6Q9H0Q3 95 aa17.67■□□□□ 0.42
CACNB3-208ENST00000548279 TRAV3A0A0B4J244 114 aa17.66■□□□□ 0.42
CACNB3-208ENST00000548279 GABARAPO95166 117 aa17.66■□□□□ 0.42
CACNB3-208ENST00000548279 APOA1P02647 267 aa17.66■□□□□ 0.42
CACNB3-208ENST00000548279 ZNF735P0CB33 412 aa17.66■□□□□ 0.42
CACNB3-208ENST00000548279 GP9P14770 177 aa17.66■□□□□ 0.42
CACNB3-208ENST00000548279 SYNJ2BPP57105 145 aa17.66■□□□□ 0.42
CACNB3-208ENST00000548279 HERV-K104P61576 105 aa17.66■□□□□ 0.42
CACNB3-208ENST00000548279 CATR1Q13166 79 aa17.66■□□□□ 0.42
CACNB3-208ENST00000548279 EXOSC2Q13868 293 aaKnown RBP17.66■□□□□ 0.42
CACNB3-208ENST00000548279 IL34Q6ZMJ4 242 aa17.66■□□□□ 0.42
CACNB3-208ENST00000548279 ANKRD13BQ86YJ7 626 aa17.66■□□□□ 0.42
CACNB3-208ENST00000548279 OR6Q1Q8NGQ2 317 aa17.66■□□□□ 0.42
CACNB3-208ENST00000548279 FAM223BA6NKX1 122 aa17.65■□□□□ 0.42
CACNB3-208ENST00000548279 OR2J3O76001 311 aa17.65■□□□□ 0.42
CACNB3-208ENST00000548279 S1PR2O95136 353 aa17.65■□□□□ 0.42
CACNB3-208ENST00000548279 AREGP15514 252 aa17.65■□□□□ 0.42
CACNB3-208ENST00000548279 MAS1LP35410 378 aa17.65■□□□□ 0.42
CACNB3-208ENST00000548279 SNX29P2Q8IUI4 249 aa17.65■□□□□ 0.42
CACNB3-208ENST00000548279 FAM223AQ8IWN6 122 aa17.65■□□□□ 0.42
CACNB3-208ENST00000548279 OR5H2Q8NGV7 314 aa17.65■□□□□ 0.42
CACNB3-208ENST00000548279 ASCL2Q99929 193 aa17.65■□□□□ 0.42
CACNB3-208ENST00000548279 RSRP1Q9BUV0 290 aa17.65■□□□□ 0.42
CACNB3-208ENST00000548279 BET1LQ9NYM9 111 aa17.65■□□□□ 0.42
CACNB3-208ENST00000548279 BMPR1BO00238 502 aa17.64■□□□□ 0.41
CACNB3-208ENST00000548279 IGLV1-51P01701 117 aa17.64■□□□□ 0.41
CACNB3-208ENST00000548279 HLA-DMAP28067 261 aa17.64■□□□□ 0.41
CACNB3-208ENST00000548279 HRH1P35367 487 aa17.64■□□□□ 0.41
CACNB3-208ENST00000548279 TAS2R46P59540 309 aa17.64■□□□□ 0.41
CACNB3-208ENST00000548279 RPL8P62917 257 aaKnown RBP17.64■□□□□ 0.41
CACNB3-208ENST00000548279 POU2AF1Q16633 256 aa17.64■□□□□ 0.41
CACNB3-208ENST00000548279 AADACL3Q5VUY0 350 aa17.64■□□□□ 0.41
CACNB3-208ENST00000548279 OR9G4Q8NGQ1 327 aa17.64■□□□□ 0.41
CACNB3-208ENST00000548279 CMTM3Q96MX0 182 aa17.64■□□□□ 0.41
CACNB3-208ENST00000548279 ELOVL1Q9BW60 279 aa17.64■□□□□ 0.41
CACNB3-208ENST00000548279 SLC2A9Q9NRM0 540 aa17.64■□□□□ 0.41
CACNB3-208ENST00000548279 ZNF257Q9Y2Q1 563 aa17.64■□□□□ 0.41
CACNB3-208ENST00000548279 SMAD5-AS1Q9Y6J3 95 aa17.64■□□□□ 0.41
CACNB3-208ENST00000548279 NPIPB5A8MRT5 1133 aa17.63■□□□□ 0.41
CACNB3-208ENST00000548279 HPRT1P00492 218 aa17.63■□□□□ 0.41
CACNB3-208ENST00000548279 HLA-GP17693 338 aa17.63■□□□□ 0.41
CACNB3-208ENST00000548279 TAS2R31P59538 309 aa17.63■□□□□ 0.41
CACNB3-208ENST00000548279 ATP5G2Q06055 141 aa17.63■□□□□ 0.41
CACNB3-208ENST00000548279 GPR107Q5VW38 600 aa17.63■□□□□ 0.41
CACNB3-208ENST00000548279 FANCD2OSQ96PS1 177 aa17.63■□□□□ 0.41
CACNB3-208ENST00000548279 HRASLSQ9HDD0 168 aa17.63■□□□□ 0.41
CACNB3-208ENST00000548279 DMRT1Q9Y5R6 373 aa17.63■□□□□ 0.41
CACNB3-208ENST00000548279 PGLYRP1O75594 196 aaPredicted RBP17.62■□□□□ 0.41
CACNB3-208ENST00000548279 RLN1P04808 185 aa17.62■□□□□ 0.41
CACNB3-208ENST00000548279 RPA2P15927 270 aa17.62■□□□□ 0.41
CACNB3-208ENST00000548279 RORCP51449 518 aa17.62■□□□□ 0.41
CACNB3-208ENST00000548279 RPEL1Q2QD12 228 aa17.62■□□□□ 0.41
CACNB3-208ENST00000548279 C15orf32Q32M92 178 aa17.62■□□□□ 0.41
CACNB3-208ENST00000548279 SLC25A42Q86VD7 318 aa17.62■□□□□ 0.41
CACNB3-208ENST00000548279 NECAP1Q8NC96 275 aa17.62■□□□□ 0.41
CACNB3-208ENST00000548279 OR4A5Q8NH83 315 aa17.62■□□□□ 0.41
CACNB3-208ENST00000548279 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.61■□□□□ 0.41
CACNB3-208ENST00000548279 UPK2O00526 184 aa17.61■□□□□ 0.41
CACNB3-208ENST00000548279 REG1AP05451 166 aa17.61■□□□□ 0.41
CACNB3-208ENST00000548279 CRYGCP07315 174 aa17.61■□□□□ 0.41
CACNB3-208ENST00000548279 CSN3P07498 182 aa17.61■□□□□ 0.41
CACNB3-208ENST00000548279 NQO2P16083 231 aa17.61■□□□□ 0.41
CACNB3-208ENST00000548279 CTRB1P17538 263 aa17.61■□□□□ 0.41
CACNB3-208ENST00000548279 PSMB6P28072 239 aa17.61■□□□□ 0.41
CACNB3-208ENST00000548279 OR2B8PP59922 312 aa17.61■□□□□ 0.41
CACNB3-208ENST00000548279 CTRB2Q6GPI1 263 aa17.61■□□□□ 0.41
CACNB3-208ENST00000548279 PLEKHA2Q9HB19 425 aa17.61■□□□□ 0.41
CACNB3-208ENST00000548279 TMEM140Q9NV12 185 aa17.61■□□□□ 0.41
CACNB3-208ENST00000548279 S4R3C0 116 aa17.61■□□□□ 0.41
CACNB3-208ENST00000548279 SMIM31A0A1B0GVY4 71 aa17.6■□□□□ 0.41
CACNB3-208ENST00000548279 NDUFB8O95169 186 aa17.6■□□□□ 0.41
CACNB3-208ENST00000548279 ALDH3B2P48448 385 aa17.6■□□□□ 0.41
CACNB3-208ENST00000548279 RNASE12Q5GAN4 147 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms