RNA–Protein interactions for RNA: ENST00000547706.1

RPAP3-204, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 2

Gene RPAP3, Length 420 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-204ENST00000547706 WDR12Q9GZL7 423 aaKnown RBP11.09□□□□□ -0.63
RPAP3-204ENST00000547706 PARP11Q9NR21 331 aa11.09□□□□□ -0.63
RPAP3-204ENST00000547706 TSSC4Q9Y5U2 329 aaPredicted RBP11.09□□□□□ -0.63
RPAP3-204ENST00000547706 MARCH11A6NNE9 402 aa11.08□□□□□ -0.64
RPAP3-204ENST00000547706 BRI3O95415 125 aa11.08□□□□□ -0.64
RPAP3-204ENST00000547706 SERPINE2P07093 398 aa11.08□□□□□ -0.64
RPAP3-204ENST00000547706 IL6RP08887 468 aaPredicted RBP11.08□□□□□ -0.64
RPAP3-204ENST00000547706 IL7P13232 177 aa11.08□□□□□ -0.64
RPAP3-204ENST00000547706 LPAR6P43657 344 aa11.08□□□□□ -0.64
RPAP3-204ENST00000547706 C2orf68Q2NKX9 166 aa11.08□□□□□ -0.64
RPAP3-204ENST00000547706 ZNF585BQ52M93 769 aa11.08□□□□□ -0.64
RPAP3-204ENST00000547706 C19orf54Q5BKX5 351 aa11.08□□□□□ -0.64
RPAP3-204ENST00000547706 MINDY2Q8NBR6 621 aa11.08□□□□□ -0.64
RPAP3-204ENST00000547706 OR5M8Q8NGP6 311 aa11.08□□□□□ -0.64
RPAP3-204ENST00000547706 R3HDM4Q96D70 268 aa11.08□□□□□ -0.64
RPAP3-204ENST00000547706 CLCC1Q96S66 551 aa11.08□□□□□ -0.64
RPAP3-204ENST00000547706 TSC22D3Q99576 134 aa11.08□□□□□ -0.64
RPAP3-204ENST00000547706 SPIN2AQ99865 258 aa11.08□□□□□ -0.64
RPAP3-204ENST00000547706 SPIN2BQ9BPZ2 258 aa11.08□□□□□ -0.64
RPAP3-204ENST00000547706 RTBDNQ9BSG5 229 aaPredicted RBP11.08□□□□□ -0.64
RPAP3-204ENST00000547706 ZNF430Q9H8G1 570 aaPredicted RBP11.08□□□□□ -0.64
RPAP3-204ENST00000547706 TPSG1Q9NRR2 321 aa11.08□□□□□ -0.64
RPAP3-204ENST00000547706 KCNIP3Q9Y2W7 256 aa11.08□□□□□ -0.64
RPAP3-204ENST00000547706 C3orf85A0A1B0GTC6 90 aa11.07□□□□□ -0.64
RPAP3-204ENST00000547706 H3BUA1 57 aa11.07□□□□□ -0.64
RPAP3-204ENST00000547706 ARPC1BO15143 372 aaKnown RBP11.07□□□□□ -0.64
RPAP3-204ENST00000547706 S1PR2O95136 353 aa11.07□□□□□ -0.64
RPAP3-204ENST00000547706 CD28P10747 220 aa11.07□□□□□ -0.64
RPAP3-204ENST00000547706 EGR2P11161 476 aaPredicted RBP11.07□□□□□ -0.64
RPAP3-204ENST00000547706 UCP1P25874 307 aa11.07□□□□□ -0.64
RPAP3-204ENST00000547706 RPL8P62917 257 aaKnown RBP11.07□□□□□ -0.64
RPAP3-204ENST00000547706 DHODHQ02127 395 aa11.07□□□□□ -0.64
RPAP3-204ENST00000547706 RBMS2Q15434 407 aaKnown RBP11.07□□□□□ -0.64
RPAP3-204ENST00000547706 MRGPRG-AS1Q2M3A8 158 aa11.07□□□□□ -0.64
RPAP3-204ENST00000547706 CXorf66Q5JRM2 361 aaPredicted RBP11.07□□□□□ -0.64
RPAP3-204ENST00000547706 THOC7Q6I9Y2 204 aaKnown RBP11.07□□□□□ -0.64
RPAP3-204ENST00000547706 OR4A47Q6IF82 309 aa11.07□□□□□ -0.64
RPAP3-204ENST00000547706 DMBX1Q8NFW5 382 aa11.07□□□□□ -0.64
RPAP3-204ENST00000547706 ABHD5Q8WTS1 349 aa11.07□□□□□ -0.64
RPAP3-204ENST00000547706 GALNT14Q96FL9 552 aa11.07□□□□□ -0.64
RPAP3-204ENST00000547706 SRSF8Q9BRL6 282 aaKnown RBP11.07□□□□□ -0.64
RPAP3-204ENST00000547706 C5orf66Q9H5L9 145 aa11.07□□□□□ -0.64
RPAP3-204ENST00000547706 FKBP11Q9NYL4 201 aa11.07□□□□□ -0.64
RPAP3-204ENST00000547706 LINC00527Q9UJ94 153 aa11.07□□□□□ -0.64
RPAP3-204ENST00000547706 FOXA2Q9Y261 457 aaPredicted RBP11.07□□□□□ -0.64
RPAP3-204ENST00000547706 TCRBV4S1A1TA0A5B7 111 aa11.06□□□□□ -0.64
RPAP3-204ENST00000547706 CRYM-AS1A6NIL9 109 aa11.06□□□□□ -0.64
RPAP3-204ENST00000547706 UPK2O00526 184 aa11.06□□□□□ -0.64
RPAP3-204ENST00000547706 IGLV1-40P01703 118 aa11.06□□□□□ -0.64
RPAP3-204ENST00000547706 PI3P19957 117 aa11.06□□□□□ -0.64
RPAP3-204ENST00000547706 PSMB8P28062 276 aa11.06□□□□□ -0.64
RPAP3-204ENST00000547706 NDPQ00604 133 aa11.06□□□□□ -0.64
RPAP3-204ENST00000547706 SRSF4Q08170 494 aaKnown RBP11.06□□□□□ -0.64
RPAP3-204ENST00000547706 PJVKQ0ZLH3 352 aa11.06□□□□□ -0.64
RPAP3-204ENST00000547706 ZNF846Q147U1 533 aa11.06□□□□□ -0.64
RPAP3-204ENST00000547706 TNXAQ16473 311 aa11.06□□□□□ -0.64
RPAP3-204ENST00000547706 UNQ5815/PRO19632Q6UWF5 114 aa11.06□□□□□ -0.64
RPAP3-204ENST00000547706 ZNF329Q86UD4 541 aa11.06□□□□□ -0.64
RPAP3-204ENST00000547706 SLC25A42Q86VD7 318 aa11.06□□□□□ -0.64
RPAP3-204ENST00000547706 SGPP2Q8IWX5 399 aa11.06□□□□□ -0.64
RPAP3-204ENST00000547706 SRSF12Q8WXF0 261 aaKnown RBP11.06□□□□□ -0.64
RPAP3-204ENST00000547706 CITED2Q99967 270 aaPredicted RBP11.06□□□□□ -0.64
RPAP3-204ENST00000547706 NAA60Q9H7X0 242 aa11.06□□□□□ -0.64
RPAP3-204ENST00000547706 TMEM140Q9NV12 185 aa11.06□□□□□ -0.64
RPAP3-204ENST00000547706 TEX13DA0A0J9YY54 714 aaPredicted RBP11.05□□□□□ -0.64
RPAP3-204ENST00000547706 SNAPC5O75971 98 aa11.05□□□□□ -0.64
RPAP3-204ENST00000547706 HLA-GP17693 338 aa11.05□□□□□ -0.64
RPAP3-204ENST00000547706 UBE2MP61081 183 aaKnown RBP11.05□□□□□ -0.64
RPAP3-204ENST00000547706 GNB1P62873 340 aa11.05□□□□□ -0.64
RPAP3-204ENST00000547706 SSBP2P81877 361 aaPredicted RBP11.05□□□□□ -0.64
RPAP3-204ENST00000547706 TCTEX1D4Q5JR98 221 aa11.05□□□□□ -0.64
RPAP3-204ENST00000547706 PRR31Q5SQ13 230 aa11.05□□□□□ -0.64
RPAP3-204ENST00000547706 TMEM65Q6PI78 240 aa11.05□□□□□ -0.64
RPAP3-204ENST00000547706 SSX9Q7RTT3 188 aa11.05□□□□□ -0.64
RPAP3-204ENST00000547706 HSD17B13Q7Z5P4 300 aaPredicted RBP11.05□□□□□ -0.64
RPAP3-204ENST00000547706 VKORC1L1Q8N0U8 176 aa11.05□□□□□ -0.64
RPAP3-204ENST00000547706 LFNGQ8NES3 379 aa11.05□□□□□ -0.64
RPAP3-204ENST00000547706 OR4F17Q8NGA8 305 aa11.05□□□□□ -0.64
RPAP3-204ENST00000547706 SEC22AQ96IW7 307 aa11.05□□□□□ -0.64
RPAP3-204ENST00000547706 OR4F4Q96R69 305 aa11.05□□□□□ -0.64
RPAP3-204ENST00000547706 TMEM222Q9H0R3 208 aa11.05□□□□□ -0.64
RPAP3-204ENST00000547706 SLA2Q9H6Q3 261 aa11.05□□□□□ -0.64
RPAP3-204ENST00000547706 PRNDQ9UKY0 176 aa11.05□□□□□ -0.64
RPAP3-204ENST00000547706 FBXO7Q9Y3I1 522 aa11.05□□□□□ -0.64
RPAP3-204ENST00000547706 WSB1Q9Y6I7 421 aa11.05□□□□□ -0.64
RPAP3-204ENST00000547706 MSGN1A6NI15 193 aa11.04□□□□□ -0.64
RPAP3-204ENST00000547706 G3V318 75 aa11.04□□□□□ -0.64
RPAP3-204ENST00000547706 CDS2O95674 445 aa11.04□□□□□ -0.64
RPAP3-204ENST00000547706 KRASP01116 189 aa11.04□□□□□ -0.64
RPAP3-204ENST00000547706 ANXA3P12429 323 aa11.04□□□□□ -0.64
RPAP3-204ENST00000547706 RPL27AP46776 148 aaKnown RBP11.04□□□□□ -0.64
RPAP3-204ENST00000547706 CDX1P47902 265 aaPredicted RBP11.04□□□□□ -0.64
RPAP3-204ENST00000547706 RPL23AP62750 156 aaKnown RBP11.04□□□□□ -0.64
RPAP3-204ENST00000547706 SRPXP78539 464 aa11.04□□□□□ -0.64
RPAP3-204ENST00000547706 ECSCRQ19T08 205 aa11.04□□□□□ -0.64
RPAP3-204ENST00000547706 TMEM128Q5BJH2 165 aa11.04□□□□□ -0.64
RPAP3-204ENST00000547706 H2BFWTQ7Z2G1 175 aa11.04□□□□□ -0.64
RPAP3-204ENST00000547706 FAM219AQ8IW50 185 aa11.04□□□□□ -0.64
RPAP3-204ENST00000547706 GRPEL2Q8TAA5 225 aa11.04□□□□□ -0.64
RPAP3-204ENST00000547706 MYOZ3Q8TDC0 251 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms