RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 PTTG2Q9NZH5 202 aa13.19□□□□□ -0.3
CCDC38-203ENST00000546803 COPZ2Q9P299 210 aa13.19□□□□□ -0.3
CCDC38-203ENST00000546803 C14orf166Q9Y224 244 aaKnown RBP13.19□□□□□ -0.3
CCDC38-203ENST00000546803 FBXO7Q9Y3I1 522 aa13.19□□□□□ -0.3
CCDC38-203ENST00000546803 KBTBD11O94819 623 aa13.18□□□□□ -0.3
CCDC38-203ENST00000546803 S1PR2O95136 353 aa13.18□□□□□ -0.3
CCDC38-203ENST00000546803 PI3P19957 117 aa13.18□□□□□ -0.3
CCDC38-203ENST00000546803 MAS1LP35410 378 aa13.18□□□□□ -0.3
CCDC38-203ENST00000546803 INPP1P49441 399 aa13.18□□□□□ -0.3
CCDC38-203ENST00000546803 ERVK-16P61578 105 aa13.18□□□□□ -0.3
CCDC38-203ENST00000546803 SSBP2P81877 361 aaPredicted RBP13.18□□□□□ -0.3
CCDC38-203ENST00000546803 TNXAQ16473 311 aa13.18□□□□□ -0.3
CCDC38-203ENST00000546803 ECSCRQ19T08 205 aa13.18□□□□□ -0.3
CCDC38-203ENST00000546803 ZNF585BQ52M93 769 aa13.18□□□□□ -0.3
CCDC38-203ENST00000546803 C19orf54Q5BKX5 351 aa13.18□□□□□ -0.3
CCDC38-203ENST00000546803 ZNF57Q68EA5 555 aaPredicted RBP13.18□□□□□ -0.3
CCDC38-203ENST00000546803 SSX9Q7RTT3 188 aa13.18□□□□□ -0.3
CCDC38-203ENST00000546803 GRPEL2Q8TAA5 225 aa13.18□□□□□ -0.3
CCDC38-203ENST00000546803 R3HDM4Q96D70 268 aa13.18□□□□□ -0.3
CCDC38-203ENST00000546803 GPR132Q9UNW8 380 aa13.18□□□□□ -0.3
CCDC38-203ENST00000546803 FOXA2Q9Y261 457 aaPredicted RBP13.18□□□□□ -0.3
CCDC38-203ENST00000546803 ADARB2-AS1A8MUL3 147 aa13.17□□□□□ -0.3
CCDC38-203ENST00000546803 H0Y980 276 aa13.17□□□□□ -0.3
CCDC38-203ENST00000546803 B3GALNT1O75752 331 aa13.17□□□□□ -0.3
CCDC38-203ENST00000546803 FGF2P09038 288 aa13.17□□□□□ -0.3
CCDC38-203ENST00000546803 PSMB8P28062 276 aa13.17□□□□□ -0.3
CCDC38-203ENST00000546803 BAK1Q16611 211 aa13.17□□□□□ -0.3
CCDC38-203ENST00000546803 NSUN5P1Q3KNT7 163 aa13.17□□□□□ -0.3
CCDC38-203ENST00000546803 KHDC1LQ5JSQ8 128 aa13.17□□□□□ -0.3
CCDC38-203ENST00000546803 OR4A47Q6IF82 309 aa13.17□□□□□ -0.3
CCDC38-203ENST00000546803 UNQ5815/PRO19632Q6UWF5 114 aa13.17□□□□□ -0.3
CCDC38-203ENST00000546803 LFNGQ8NES3 379 aa13.17□□□□□ -0.3
CCDC38-203ENST00000546803 DMBX1Q8NFW5 382 aa13.17□□□□□ -0.3
CCDC38-203ENST00000546803 OR5M8Q8NGP6 311 aa13.17□□□□□ -0.3
CCDC38-203ENST00000546803 S100ZQ8WXG8 99 aa13.17□□□□□ -0.3
CCDC38-203ENST00000546803 SDHCQ99643 169 aaPredicted RBP13.17□□□□□ -0.3
CCDC38-203ENST00000546803 FAM103A1Q9BTL3 118 aaKnown RBP13.17□□□□□ -0.3
CCDC38-203ENST00000546803 AKIP1Q9NQ31 210 aa13.17□□□□□ -0.3
CCDC38-203ENST00000546803 IGLV1-40P01703 118 aa13.16□□□□□ -0.3
CCDC38-203ENST00000546803 SERPINE2P07093 398 aa13.16□□□□□ -0.3
CCDC38-203ENST00000546803 IL6RP08887 468 aaPredicted RBP13.16□□□□□ -0.3
CCDC38-203ENST00000546803 RPA2P15927 270 aa13.16□□□□□ -0.3
CCDC38-203ENST00000546803 SLC6A1P30531 599 aa13.16□□□□□ -0.3
CCDC38-203ENST00000546803 RPL23AP62750 156 aaKnown RBP13.16□□□□□ -0.3
CCDC38-203ENST00000546803 RPL8P62917 257 aaKnown RBP13.16□□□□□ -0.3
CCDC38-203ENST00000546803 HIST2H2BDQ6DRA6 164 aa13.16□□□□□ -0.3
CCDC38-203ENST00000546803 SRSF12Q8WXF0 261 aaKnown RBP13.16□□□□□ -0.3
CCDC38-203ENST00000546803 SPIN2AQ99865 258 aa13.16□□□□□ -0.3
CCDC38-203ENST00000546803 SPIN2BQ9BPZ2 258 aa13.16□□□□□ -0.3
CCDC38-203ENST00000546803 RTBDNQ9BSG5 229 aaPredicted RBP13.16□□□□□ -0.3
CCDC38-203ENST00000546803 C5orf66Q9H5L9 145 aa13.16□□□□□ -0.3
CCDC38-203ENST00000546803 TMEM140Q9NV12 185 aa13.16□□□□□ -0.3
CCDC38-203ENST00000546803 C3orf85A0A1B0GTC6 90 aa13.15□□□□□ -0.3
CCDC38-203ENST00000546803 A0A1W2PN81 502 aa13.15□□□□□ -0.3
CCDC38-203ENST00000546803 NAP1L6A6NFF2 107 aa13.15□□□□□ -0.3
CCDC38-203ENST00000546803 MSGN1A6NI15 193 aa13.15□□□□□ -0.3
CCDC38-203ENST00000546803 MARCH11A6NNE9 402 aa13.15□□□□□ -0.3
CCDC38-203ENST00000546803 UPK2O00526 184 aa13.15□□□□□ -0.3
CCDC38-203ENST00000546803 KRASP01116 189 aa13.15□□□□□ -0.3
CCDC38-203ENST00000546803 CD40LGP29965 261 aa13.15□□□□□ -0.3
CCDC38-203ENST00000546803 CHRNA7P36544 502 aa13.15□□□□□ -0.3
CCDC38-203ENST00000546803 TMEM65Q6PI78 240 aa13.15□□□□□ -0.3
CCDC38-203ENST00000546803 OR4F17Q8NGA8 305 aa13.15□□□□□ -0.3
CCDC38-203ENST00000546803 OR4F4Q96R69 305 aa13.15□□□□□ -0.3
CCDC38-203ENST00000546803 TEX13DA0A0J9YY54 714 aaPredicted RBP13.14□□□□□ -0.31
CCDC38-203ENST00000546803 A0A1W2PRX2 142 aa13.14□□□□□ -0.31
CCDC38-203ENST00000546803 RPLP1P05386 114 aaKnown RBP13.14□□□□□ -0.31
CCDC38-203ENST00000546803 PF4V1P10720 104 aa13.14□□□□□ -0.31
CCDC38-203ENST00000546803 IL7P13232 177 aa13.14□□□□□ -0.31
CCDC38-203ENST00000546803 HLA-GP17693 338 aa13.14□□□□□ -0.31
CCDC38-203ENST00000546803 RPL27AP46776 148 aaKnown RBP13.14□□□□□ -0.31
CCDC38-203ENST00000546803 CDX1P47902 265 aaPredicted RBP13.14□□□□□ -0.31
CCDC38-203ENST00000546803 PHB2Q99623 299 aa13.14□□□□□ -0.31
CCDC38-203ENST00000546803 SLC25A21Q9BQT8 299 aaPredicted RBP13.14□□□□□ -0.31
CCDC38-203ENST00000546803 C7orf50Q9BRJ6 194 aaKnown RBP13.14□□□□□ -0.31
CCDC38-203ENST00000546803 CCDC32Q9BV29 185 aa13.14□□□□□ -0.31
CCDC38-203ENST00000546803 NAA60Q9H7X0 242 aa13.14□□□□□ -0.31
CCDC38-203ENST00000546803 CENPXA8MT69 81 aa13.13□□□□□ -0.31
CCDC38-203ENST00000546803 H3BUA1 57 aa13.13□□□□□ -0.31
CCDC38-203ENST00000546803 SOX15O60248 233 aa13.13□□□□□ -0.31
CCDC38-203ENST00000546803 SNAPC5O75971 98 aa13.13□□□□□ -0.31
CCDC38-203ENST00000546803 ATG12O94817 140 aa13.13□□□□□ -0.31
CCDC38-203ENST00000546803 TSPAN15O95858 294 aa13.13□□□□□ -0.31
CCDC38-203ENST00000546803 G6PCP35575 357 aa13.13□□□□□ -0.31
CCDC38-203ENST00000546803 RAB9AP51151 201 aa13.13□□□□□ -0.31
CCDC38-203ENST00000546803 MYOZ3Q8TDC0 251 aa13.13□□□□□ -0.31
CCDC38-203ENST00000546803 TP53RKQ96S44 253 aa13.13□□□□□ -0.31
CCDC38-203ENST00000546803 TSC22D3Q99576 134 aa13.13□□□□□ -0.31
CCDC38-203ENST00000546803 KLK15Q9H2R5 256 aa13.13□□□□□ -0.31
CCDC38-203ENST00000546803 SLA2Q9H6Q3 261 aa13.13□□□□□ -0.31
CCDC38-203ENST00000546803 VSIG4Q9Y279 399 aa13.13□□□□□ -0.31
CCDC38-203ENST00000546803 TENM1Q9UKZ4 2725 aa13.12□□□□□ -0.31
CCDC38-203ENST00000546803 CRYM-AS1A6NIL9 109 aa13.12□□□□□ -0.31
CCDC38-203ENST00000546803 NUDT19A8MXV4 375 aa13.12□□□□□ -0.31
CCDC38-203ENST00000546803 BRI3O95415 125 aa13.12□□□□□ -0.31
CCDC38-203ENST00000546803 IGKV1-39P01597 117 aa13.12□□□□□ -0.31
CCDC38-203ENST00000546803 IGKV1D-39P04432 117 aa13.12□□□□□ -0.31
CCDC38-203ENST00000546803 UCP1P25874 307 aa13.12□□□□□ -0.31
CCDC38-203ENST00000546803 DHODHQ02127 395 aa13.12□□□□□ -0.31
CCDC38-203ENST00000546803 C10orf55Q5SWW7 151 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms