RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 TEX13DA0A0J9YY54 714 aaPredicted RBP6.87□□□□□ -1.31
VPS29-203ENST00000546588 DIRC3C9JPN6 131 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 LYNX1G3V0Z9 82 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 RBFOX2O43251 390 aaKnown RBP eCLIP6.87□□□□□ -1.31
VPS29-203ENST00000546588 PROP1O75360 226 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 PGLYRP1O75594 196 aaPredicted RBP6.87□□□□□ -1.31
VPS29-203ENST00000546588 IGHV2-5P01817 119 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 LYNX1P0DP58 116 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 PGAM2P15259 253 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 MAS1LP35410 378 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 CEACAM6P40199 344 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 ELLP55199 621 aaPredicted RBP6.87□□□□□ -1.31
VPS29-203ENST00000546588 EDDM3BP56851 147 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 CD300CQ08708 224 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 GNMTQ14749 295 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 ANKRD55Q3KP44 614 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 ZNF66Q6ZN08 573 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 ODF3L1Q8IXM7 274 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 CMTM1Q8IZ96 169 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 FGFRL1Q8N441 504 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 DRAM1Q8N682 238 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 UXS1Q8NBZ7 420 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 DEFB108BQ8NET1 73 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 OR8B3Q8NGG8 313 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 COQ8AQ8NI60 647 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 IL1F10Q8WWZ1 152 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 DDB2Q92466 427 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 DAZAP1Q96EP5 407 aaKnown RBP6.87□□□□□ -1.31
VPS29-203ENST00000546588 RRNAD1Q96FB5 475 aaKnown RBP6.87□□□□□ -1.31
VPS29-203ENST00000546588 C18orf12Q96KH6 178 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 FAM210BQ96KR6 192 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 OR8B2Q96RD0 313 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 CCL19Q99731 98 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 PCGF1Q9BSM1 259 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 NMES1Q9C002 83 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 ZNF436Q9C0F3 470 aaPredicted RBP6.87□□□□□ -1.31
VPS29-203ENST00000546588 PARP12Q9H0J9 701 aaKnown RBP6.87□□□□□ -1.31
VPS29-203ENST00000546588 RANGRFQ9HD47 186 aaPredicted RBP6.87□□□□□ -1.31
VPS29-203ENST00000546588 OR2S2Q9NQN1 319 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 CR1P17927 2039 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 TENM4Q6N022 2769 aa6.87□□□□□ -1.31
VPS29-203ENST00000546588 ABCA2Q9BZC7 2435 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 PPIAL4CA0A0B4J2A2 164 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 C3orf85A0A1B0GTC6 90 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 A0A1B0GV72 72 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 M0R1W7 72 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 SNAPC5O75971 98 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 LY6HO94772 140 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 IGLV1-47P01700 117 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 PPBPP02775 128 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 OR5AC1P0C628 307 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 SLC25A6P12236 298 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 LYL1P12980 280 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 AKR1C4P17516 323 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 GATA3P23771 443 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 PPP1CCP36873 323 aaKnown RBP6.86□□□□□ -1.31
VPS29-203ENST00000546588 GPR6P46095 362 aaPredicted RBP6.86□□□□□ -1.31
VPS29-203ENST00000546588 PDLIM4P50479 330 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 DSCR9P59020 149 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 FXYD4P59646 89 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 LMO4P61968 165 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 NUTF2P61970 127 aaKnown RBP6.86□□□□□ -1.31
VPS29-203ENST00000546588 C2orf68Q2NKX9 166 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 ABCA11PQ4W5N1 156 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 NMSQ5H8A3 153 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 TBC1D26Q86UD7 250 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 ZFP82Q8N141 532 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 OR52L2PQ8NGH6 319 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 C10orf105Q8TEF2 133 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 SECTM1Q8WVN6 248 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 CACNG8Q8WXS5 425 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 TOMM40LQ969M1 308 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 RAB39BQ96DA2 213 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 FYTTD1Q96QD9 318 aaKnown RBP6.86□□□□□ -1.31
VPS29-203ENST00000546588 TP53RKQ96S44 253 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 ALKBH7Q9BT30 221 aaPredicted RBP6.86□□□□□ -1.31
VPS29-203ENST00000546588 ABHD14AQ9BUJ0 271 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 PLEKHA2Q9HB19 425 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 LPAR2Q9HBW0 351 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 CCL28Q9NRJ3 127 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 KCNIP3Q9Y2W7 256 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 TMED3Q9Y3Q3 217 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 TNFRSF18Q9Y5U5 241 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 CRYBG3Q68DQ2 2970 aa6.86□□□□□ -1.31
VPS29-203ENST00000546588 TRGV11A0A075B6L2 103 aa6.85□□□□□ -1.31
VPS29-203ENST00000546588 A0A096LNT2 108 aa6.85□□□□□ -1.31
VPS29-203ENST00000546588 A0A1B0GW15 77 aa6.85□□□□□ -1.31
VPS29-203ENST00000546588 RNF212BA8MTL3 300 aa6.85□□□□□ -1.31
VPS29-203ENST00000546588 ARPC5O15511 151 aa6.85□□□□□ -1.31
VPS29-203ENST00000546588 SSNA1O43805 119 aa6.85□□□□□ -1.31
VPS29-203ENST00000546588 NDUFS7O75251 213 aa6.85□□□□□ -1.31
VPS29-203ENST00000546588 MMP23AO75900 390 aa6.85□□□□□ -1.31
VPS29-203ENST00000546588 P0C879 139 aa6.85□□□□□ -1.31
VPS29-203ENST00000546588 IGHV1-8P0DP01 117 aa6.85□□□□□ -1.31
VPS29-203ENST00000546588 S100GP29377 79 aa6.85□□□□□ -1.31
VPS29-203ENST00000546588 TIRAPP58753 221 aa6.85□□□□□ -1.31
VPS29-203ENST00000546588 BRWD1-AS2P59051 145 aa6.85□□□□□ -1.31
VPS29-203ENST00000546588 RAB11AP62491 216 aa6.85□□□□□ -1.31
VPS29-203ENST00000546588 RPL23AP62750 156 aaKnown RBP6.85□□□□□ -1.31
VPS29-203ENST00000546588 RBX1P62877 108 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms