RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 F8W036 122 aa9.73□□□□□ -0.85
CCDC38-202ENST00000546386 TSPAN4O14817 238 aa9.73□□□□□ -0.85
CCDC38-202ENST00000546386 TNFRSF13BO14836 293 aaPredicted RBP9.73□□□□□ -0.85
CCDC38-202ENST00000546386 HPRT1P00492 218 aa9.73□□□□□ -0.85
CCDC38-202ENST00000546386 IGHV1-8P0DP01 117 aa9.73□□□□□ -0.85
CCDC38-202ENST00000546386 HOXA1P49639 335 aaPredicted RBP9.73□□□□□ -0.85
CCDC38-202ENST00000546386 ERVK-16P61578 105 aa9.73□□□□□ -0.85
CCDC38-202ENST00000546386 BLOC1S1P78537 153 aa9.73□□□□□ -0.85
CCDC38-202ENST00000546386 EFNB3Q15768 340 aa9.73□□□□□ -0.85
CCDC38-202ENST00000546386 OXLD1Q5BKU9 147 aa9.73□□□□□ -0.85
CCDC38-202ENST00000546386 LCE2DQ5TA82 110 aaPredicted RBP9.73□□□□□ -0.85
CCDC38-202ENST00000546386 HEPN1Q6WQI6 88 aa9.73□□□□□ -0.85
CCDC38-202ENST00000546386 LRRC46Q96FV0 321 aa9.73□□□□□ -0.85
CCDC38-202ENST00000546386 MMP26Q9NRE1 261 aa9.73□□□□□ -0.85
CCDC38-202ENST00000546386 FAM212BQ9NTI7 297 aaPredicted RBP9.73□□□□□ -0.85
CCDC38-202ENST00000546386 IFNA4P05014 189 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 DANCRP0C864 163 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 P0C879 139 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 PRB4P10163 310 aaPredicted RBP9.72□□□□□ -0.85
CCDC38-202ENST00000546386 NQO2P16083 231 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 GNB1P62873 340 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 RELBQ01201 579 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 BAXQ07812 192 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 MSMO1Q15800 293 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 TRAT1Q6PIZ9 186 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 DDB2Q92466 427 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 HARBI1Q96MB7 349 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 RAB40CQ96S21 281 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 ATP5SQ99766 215 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 GINS3Q9BRX5 216 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 TMPRSS5Q9H3S3 457 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 CBLN4Q9NTU7 201 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 HSPB7Q9UBY9 170 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 J3QR06 171 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 SLC25A17O43808 307 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 SAA1P0DJI8 122 aaPredicted RBP9.72□□□□□ -0.85
CCDC38-202ENST00000546386 ZFP36P26651 326 aaKnown RBP9.72□□□□□ -0.85
CCDC38-202ENST00000546386 TMEM170AQ8WVE7 144 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 SMIM8Q96KF7 97 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 AIFM2Q9BRQ8 373 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 RAB1BQ9H0U4 201 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 RPRMQ9NS64 109 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 MYO9AB2RTY4 2548 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 CREBBPQ92793 2442 aa9.72□□□□□ -0.85
CCDC38-202ENST00000546386 GATA2P23769 480 aaPredicted RBP9.71□□□□□ -0.85
CCDC38-202ENST00000546386 LINC01559Q495D7 138 aa9.71□□□□□ -0.85
CCDC38-202ENST00000546386 C4orf17Q53FE4 359 aa9.71□□□□□ -0.85
CCDC38-202ENST00000546386 ZBTB34Q8NCN2 500 aa9.71□□□□□ -0.85
CCDC38-202ENST00000546386 SSMEM1Q8WWF3 244 aa9.71□□□□□ -0.85
CCDC38-202ENST00000546386 PCGF1Q9BSM1 259 aa9.71□□□□□ -0.85
CCDC38-202ENST00000546386 DUXBA0A1W2PPF3 345 aa9.71□□□□□ -0.86
CCDC38-202ENST00000546386 FAM74A7A6NL05 159 aa9.71□□□□□ -0.86
CCDC38-202ENST00000546386 ZFP92A6NM28 416 aa9.71□□□□□ -0.86
CCDC38-202ENST00000546386 IFNA5P01569 189 aa9.71□□□□□ -0.86
CCDC38-202ENST00000546386 IGKV1D-33P01593 117 aa9.71□□□□□ -0.86
CCDC38-202ENST00000546386 IGKV1-33P01594 117 aa9.71□□□□□ -0.86
CCDC38-202ENST00000546386 IGHV2-70P01814 119 aa9.71□□□□□ -0.86
CCDC38-202ENST00000546386 GAPDHP04406 335 aaKnown RBP9.71□□□□□ -0.86
CCDC38-202ENST00000546386 RAB2AP61019 212 aa9.71□□□□□ -0.86
CCDC38-202ENST00000546386 GNB2P62879 340 aa9.71□□□□□ -0.86
CCDC38-202ENST00000546386 ZNF266Q14584 549 aa9.71□□□□□ -0.86
CCDC38-202ENST00000546386 FAM74A3Q4VXF1 159 aa9.71□□□□□ -0.86
CCDC38-202ENST00000546386 WDR25Q64LD2 544 aaPredicted RBP9.71□□□□□ -0.86
CCDC38-202ENST00000546386 SCGB1C1Q8TD33 95 aa9.71□□□□□ -0.86
CCDC38-202ENST00000546386 PINX1Q96BK5 328 aaKnown RBP9.71□□□□□ -0.86
CCDC38-202ENST00000546386 TMEM204Q9BSN7 226 aa9.71□□□□□ -0.86
CCDC38-202ENST00000546386 PATZ1Q9HBE1 687 aaKnown RBP9.71□□□□□ -0.86
CCDC38-202ENST00000546386 STRAPQ9Y3F4 350 aaKnown RBP9.71□□□□□ -0.86
CCDC38-202ENST00000546386 MTORP42345 2549 aa9.71□□□□□ -0.86
CCDC38-202ENST00000546386 C15orf62A8K5M9 175 aa9.7□□□□□ -0.86
CCDC38-202ENST00000546386 SFTA3P0C7M3 94 aa9.7□□□□□ -0.86
CCDC38-202ENST00000546386 RAB7AP51149 207 aa9.7□□□□□ -0.86
CCDC38-202ENST00000546386 TMEM155Q4W5P6 130 aa9.7□□□□□ -0.86
CCDC38-202ENST00000546386 BTNL8Q6UX41 500 aa9.7□□□□□ -0.86
CCDC38-202ENST00000546386 MAPK1IP1LQ8NDC0 245 aa9.7□□□□□ -0.86
CCDC38-202ENST00000546386 OR4S2Q8NH73 311 aa9.7□□□□□ -0.86
CCDC38-202ENST00000546386 GATAD1Q8WUU5 269 aa9.7□□□□□ -0.86
CCDC38-202ENST00000546386 TSNAXQ99598 290 aaKnown RBP9.7□□□□□ -0.86
CCDC38-202ENST00000546386 BPESC1Q9GZL8 116 aa9.7□□□□□ -0.86
CCDC38-202ENST00000546386 SLC25A22Q9H936 323 aa9.7□□□□□ -0.86
CCDC38-202ENST00000546386 ZFP57Q9NU63 452 aa9.7□□□□□ -0.86
CCDC38-202ENST00000546386 TCF19Q9Y242 345 aa9.7□□□□□ -0.86
CCDC38-202ENST00000546386 IGHV2-26A0A0B4J1V2 119 aa9.7□□□□□ -0.86
CCDC38-202ENST00000546386 TMEM218A2RU14 115 aa9.7□□□□□ -0.86
CCDC38-202ENST00000546386 RNASEK-C17orf49H0YIS7 233 aa9.7□□□□□ -0.86
CCDC38-202ENST00000546386 PAX5Q02548 391 aa9.7□□□□□ -0.86
CCDC38-202ENST00000546386 AKR1C8PQ5T2L2 129 aa9.7□□□□□ -0.86
CCDC38-202ENST00000546386 EIF5AL1Q6IS14 154 aaKnown RBP9.7□□□□□ -0.86
CCDC38-202ENST00000546386 CBLN2Q8IUK8 224 aa9.7□□□□□ -0.86
CCDC38-202ENST00000546386 OR10P1Q8NGE3 313 aa9.7□□□□□ -0.86
CCDC38-202ENST00000546386 UQCC1Q9NVA1 299 aa9.7□□□□□ -0.86
CCDC38-202ENST00000546386 SNAPC5O75971 98 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 SFTPCP11686 197 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 ZP3P21754 424 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 FGF7P21781 194 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 DLX6P56179 175 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 KIAA0141Q14154 515 aaPredicted RBP9.69□□□□□ -0.86
CCDC38-202ENST00000546386 ZNF726P1Q15940 193 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 SSX2Q16385 188 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 HIST2H2BCQ6DN03 193 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms