RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 BET1LQ9NYM9 111 aa16.09■□□□□ 0.17
HMGA2-211ENST00000545998 C3orf85A0A1B0GTC6 90 aa16.08■□□□□ 0.16
HMGA2-211ENST00000545998 MARCH11A6NNE9 402 aa16.08■□□□□ 0.16
HMGA2-211ENST00000545998 G3V318 75 aa16.08■□□□□ 0.16
HMGA2-211ENST00000545998 CREBL2O60519 120 aaPredicted RBP16.08■□□□□ 0.16
HMGA2-211ENST00000545998 IL6RP08887 468 aaPredicted RBP16.08■□□□□ 0.16
HMGA2-211ENST00000545998 VDAC1P21796 283 aa16.08■□□□□ 0.16
HMGA2-211ENST00000545998 SLC35B1P78383 322 aa16.08■□□□□ 0.16
HMGA2-211ENST00000545998 C19orf54Q5BKX5 351 aa16.08■□□□□ 0.16
HMGA2-211ENST00000545998 TCTEX1D4Q5JR98 221 aa16.08■□□□□ 0.16
HMGA2-211ENST00000545998 HIST2H2BDQ6DRA6 164 aa16.08■□□□□ 0.16
HMGA2-211ENST00000545998 MMD2Q8IY49 270 aa16.08■□□□□ 0.16
HMGA2-211ENST00000545998 SGMS2Q8NHU3 365 aa16.08■□□□□ 0.16
HMGA2-211ENST00000545998 SLC25A21Q9BQT8 299 aaPredicted RBP16.08■□□□□ 0.16
HMGA2-211ENST00000545998 C7orf50Q9BRJ6 194 aaKnown RBP16.08■□□□□ 0.16
HMGA2-211ENST00000545998 NUBP2Q9Y5Y2 271 aa16.08■□□□□ 0.16
HMGA2-211ENST00000545998 WSB1Q9Y6I7 421 aa16.08■□□□□ 0.16
HMGA2-211ENST00000545998 TRAV41A0A0B4J266 112 aa16.07■□□□□ 0.16
HMGA2-211ENST00000545998 CRYM-AS1A6NIL9 109 aa16.07■□□□□ 0.16
HMGA2-211ENST00000545998 CNIH1O95406 144 aa16.07■□□□□ 0.16
HMGA2-211ENST00000545998 IGKV1-39P01597 117 aa16.07■□□□□ 0.16
HMGA2-211ENST00000545998 IGKV1D-39P04432 117 aa16.07■□□□□ 0.16
HMGA2-211ENST00000545998 CCR6P51684 374 aa16.07■□□□□ 0.16
HMGA2-211ENST00000545998 ADAD2Q8NCV1 583 aaKnown RBP16.07■□□□□ 0.16
HMGA2-211ENST00000545998 DMBX1Q8NFW5 382 aa16.07■□□□□ 0.16
HMGA2-211ENST00000545998 OR4A5Q8NH83 315 aa16.07■□□□□ 0.16
HMGA2-211ENST00000545998 GRPEL2Q8TAA5 225 aa16.07■□□□□ 0.16
HMGA2-211ENST00000545998 ABHD5Q8WTS1 349 aa16.07■□□□□ 0.16
HMGA2-211ENST00000545998 TMEM230Q96A57 120 aa16.07■□□□□ 0.16
HMGA2-211ENST00000545998 FAM103A1Q9BTL3 118 aaKnown RBP16.07■□□□□ 0.16
HMGA2-211ENST00000545998 NAA60Q9H7X0 242 aa16.07■□□□□ 0.16
HMGA2-211ENST00000545998 CENPXA8MT69 81 aa16.06■□□□□ 0.16
HMGA2-211ENST00000545998 PLA2G10O15496 165 aa16.06■□□□□ 0.16
HMGA2-211ENST00000545998 B3GALNT1O75752 331 aa16.06■□□□□ 0.16
HMGA2-211ENST00000545998 SERPINE2P07093 398 aa16.06■□□□□ 0.16
HMGA2-211ENST00000545998 PPIFP30405 207 aaKnown RBP16.06■□□□□ 0.16
HMGA2-211ENST00000545998 BTCP35070 178 aa16.06■□□□□ 0.16
HMGA2-211ENST00000545998 TNXAQ16473 311 aa16.06■□□□□ 0.16
HMGA2-211ENST00000545998 CADM3Q8N126 398 aa16.06■□□□□ 0.16
HMGA2-211ENST00000545998 OR4X2Q8NGF9 303 aa16.06■□□□□ 0.16
HMGA2-211ENST00000545998 TMEM140Q9NV12 185 aa16.06■□□□□ 0.16
HMGA2-211ENST00000545998 KRASP01116 189 aa16.05■□□□□ 0.16
HMGA2-211ENST00000545998 IGHG4P01861 327 aa16.05■□□□□ 0.16
HMGA2-211ENST00000545998 RPA2P15927 270 aa16.05■□□□□ 0.16
HMGA2-211ENST00000545998 G6PCP35575 357 aa16.05■□□□□ 0.16
HMGA2-211ENST00000545998 ERVK-16P61578 105 aa16.05■□□□□ 0.16
HMGA2-211ENST00000545998 CD83Q01151 205 aa16.05■□□□□ 0.16
HMGA2-211ENST00000545998 ECSCRQ19T08 205 aa16.05■□□□□ 0.16
HMGA2-211ENST00000545998 SP6Q3SY56 376 aa16.05■□□□□ 0.16
HMGA2-211ENST00000545998 AKIRIN2Q53H80 203 aa16.05■□□□□ 0.16
HMGA2-211ENST00000545998 TEX38Q6PEX7 206 aa16.05■□□□□ 0.16
HMGA2-211ENST00000545998 COMMD1Q8N668 190 aa16.05■□□□□ 0.16
HMGA2-211ENST00000545998 MINDY2Q8NBR6 621 aa16.05■□□□□ 0.16
HMGA2-211ENST00000545998 SEC22AQ96IW7 307 aa16.05■□□□□ 0.16
HMGA2-211ENST00000545998 WNK1Q9H4A3 2382 aa16.05■□□□□ 0.16
HMGA2-211ENST00000545998 TRAV3A0A0B4J244 114 aa16.04■□□□□ 0.16
HMGA2-211ENST00000545998 TEX13DA0A0J9YY54 714 aaPredicted RBP16.04■□□□□ 0.16
HMGA2-211ENST00000545998 UPK2O00526 184 aa16.04■□□□□ 0.16
HMGA2-211ENST00000545998 UCP1P25874 307 aa16.04■□□□□ 0.16
HMGA2-211ENST00000545998 RPL8P62917 257 aaKnown RBP16.04■□□□□ 0.16
HMGA2-211ENST00000545998 TMEM267Q0VDI3 215 aaPredicted RBP16.04■□□□□ 0.16
HMGA2-211ENST00000545998 RBMS2Q15434 407 aaKnown RBP16.04■□□□□ 0.16
HMGA2-211ENST00000545998 LFNGQ8NES3 379 aa16.04■□□□□ 0.16
HMGA2-211ENST00000545998 CITED2Q99967 270 aaPredicted RBP16.04■□□□□ 0.16
HMGA2-211ENST00000545998 ACTL6BO94805 426 aa16.04■□□□□ 0.16
HMGA2-211ENST00000545998 FGF2P09038 288 aa16.04■□□□□ 0.16
HMGA2-211ENST00000545998 OR5AC1P0C628 307 aa16.04■□□□□ 0.16
HMGA2-211ENST00000545998 MAS1LP35410 378 aa16.04■□□□□ 0.16
HMGA2-211ENST00000545998 SRSF12Q8WXF0 261 aaKnown RBP16.04■□□□□ 0.16
HMGA2-211ENST00000545998 TMEM222Q9H0R3 208 aa16.04■□□□□ 0.16
HMGA2-211ENST00000545998 LYRM1O43325 122 aa16.03■□□□□ 0.16
HMGA2-211ENST00000545998 NDUFB6O95139 128 aa16.03■□□□□ 0.16
HMGA2-211ENST00000545998 AKR1C4P17516 323 aa16.03■□□□□ 0.16
HMGA2-211ENST00000545998 HLA-GP17693 338 aa16.03■□□□□ 0.16
HMGA2-211ENST00000545998 FOXE3Q13461 319 aa16.03■□□□□ 0.16
HMGA2-211ENST00000545998 C10orf55Q5SWW7 151 aa16.03■□□□□ 0.16
HMGA2-211ENST00000545998 UNQ5815/PRO19632Q6UWF5 114 aa16.03■□□□□ 0.16
HMGA2-211ENST00000545998 SGPP2Q8IWX5 399 aa16.03■□□□□ 0.16
HMGA2-211ENST00000545998 RNF152Q8N8N0 203 aa16.03■□□□□ 0.16
HMGA2-211ENST00000545998 GLYATL2Q8WU03 294 aa16.03■□□□□ 0.16
HMGA2-211ENST00000545998 GALNT14Q96FL9 552 aa16.03■□□□□ 0.16
HMGA2-211ENST00000545998 TCRBV4S1A1TA0A5B7 111 aa16.02■□□□□ 0.16
HMGA2-211ENST00000545998 MSGN1A6NI15 193 aa16.02■□□□□ 0.16
HMGA2-211ENST00000545998 UPK1BO75841 260 aa16.02■□□□□ 0.16
HMGA2-211ENST00000545998 CDS2O95674 445 aa16.02■□□□□ 0.16
HMGA2-211ENST00000545998 IGLV1-40P01703 118 aa16.02■□□□□ 0.16
HMGA2-211ENST00000545998 ELANEP08246 267 aa16.02■□□□□ 0.16
HMGA2-211ENST00000545998 PSMB8P28062 276 aa16.02■□□□□ 0.16
HMGA2-211ENST00000545998 SUPT4H1P63272 117 aaKnown RBP16.02■□□□□ 0.16
HMGA2-211ENST00000545998 TRIM16LQ309B1 348 aa16.02■□□□□ 0.16
HMGA2-211ENST00000545998 ASPHD1Q5U4P2 390 aa16.02■□□□□ 0.16
HMGA2-211ENST00000545998 TMED4Q7Z7H5 227 aa16.02■□□□□ 0.16
HMGA2-211ENST00000545998 FOXA2Q9Y261 457 aaPredicted RBP16.02■□□□□ 0.16
HMGA2-211ENST00000545998 ADARB2-AS1A8MUL3 147 aa16.01■□□□□ 0.15
HMGA2-211ENST00000545998 E7EUB6 86 aa16.01■□□□□ 0.15
HMGA2-211ENST00000545998 SOX15O60248 233 aa16.01■□□□□ 0.15
HMGA2-211ENST00000545998 OPN1MWP04001 364 aa16.01■□□□□ 0.15
HMGA2-211ENST00000545998 OR9G9P0C7N8 305 aa16.01■□□□□ 0.15
HMGA2-211ENST00000545998 OPN1MW2P0DN77 364 aa16.01■□□□□ 0.15
HMGA2-211ENST00000545998 OPN1MW3P0DN78 364 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms