RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, human

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLSTN3-215	ENST00000544584	OR5H6	Q8NGV6	325 aa		4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	ZFAND1	Q8TCF1	268 aa		4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	MYOZ3	Q8TDC0	251 aa		4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	SRSF12	Q8WXF0	261 aa	Known RBP	4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	DDB2	Q92466	427 aa		4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	SLC25A38	Q96DW6	304 aa		4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	ZNF486	Q96H40	463 aa	Predicted RBP	4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	RITA1	Q96K30	269 aa		4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	CXorf58	Q96LI9	332 aa		4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	TMEM56	Q96MV1	263 aa		4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	MS4A10	Q96PG2	267 aa		4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	ZNF2	Q9BSG1	426 aa	Predicted RBP	4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	PARP12	Q9H0J9	701 aa	Known RBP	4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	RNF167	Q9H6Y7	350 aa		4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	PLEKHA2	Q9HB19	425 aa		4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	PALMD	Q9NP74	551 aa		4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	GAR1	Q9NY12	217 aa	Known RBP	4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	BET1L	Q9NYM9	111 aa		4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	PEF1	Q9UBV8	284 aa	Known RBP	4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	PRND	Q9UKY0	176 aa		4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	ZNF257	Q9Y2Q1	563 aa		4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	RYR1	P21817	5038 aa		4.37	□□□□□ -1.71
CLSTN3-215	ENST00000544584	TRBV7-1	A0A0A6YYK4	115 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	LINC00473	A8K010	186 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	NPIPB5	A8MRT5	1133 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	FCN1	O00602	326 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	SSX5	O60225	188 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	RBMXL2	O75526	392 aa	Known RBP	4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	IGLV2-23	P01705	113 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	PMP2	P02689	132 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	SAA1	P0DJI8	122 aa	Predicted RBP	4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	PGAM2	P15259	253 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	NAT1	P18440	290 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	F2R	P25116	425 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	HRH1	P35367	487 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	FAU	P35544	74 aa	Known RBP	4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	RFX2	P48378	723 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	UCP3	P55916	312 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	TAS2R19	P59542	299 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	AP3S2	P59780	193 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	CD69	Q07108	199 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	FHL3	Q13643	280 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	FAM106A	Q4KMX7	169 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	RNASE10	Q5GAN6	216 aa	Known RBP	4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	SNX29P2	Q8IUI4	249 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	ARRDC1	Q8N5I2	433 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	TTC9C	Q8N5M4	171 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	GVQW1	Q8N7I0	195 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	OR51H1	Q8NH63	302 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	TMEM167A	Q8TBQ9	72 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	EEF1AKMT3	Q96AZ1	226 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	MOB3A	Q96BX8	217 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	DGCR14	Q96DF8	476 aa	Known RBP	4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	FAM103A1	Q9BTL3	118 aa	Known RBP	4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	PDCD10	Q9BUL8	212 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	ZNF430	Q9H8G1	570 aa	Predicted RBP	4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	SLC2A9	Q9NRM0	540 aa		4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	RSL24D1	Q9UHA3	163 aa	Known RBP	4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.36	□□□□□ -1.71
CLSTN3-215	ENST00000544584	HERC2	O95714	4834 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	IGKV1D-8	A0A087WSZ0	117 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	IGKV1D-13	A0A0B4J2D9	117 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	MEIS3P1	A6NDR6	274 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	CCDC160	A6NGH7	325 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	MARCH11	A6NNE9	402 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	SRRM4	A7MD48	611 aa	Known RBP	4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	DISC1	C4P0D8	188 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	TNFSF12	O43508	249 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	PROP1	O75360	226 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	FCER2	P06734	321 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	CRYGB	P07316	175 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	IGKV1-13	P0DP09	117 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	HLA-G	P17693	338 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	HLA-DMA	P28067	261 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	HOXD3	P31249	432 aa	Predicted RBP	4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	S100A5	P33763	92 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	BMI1	P35226	326 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	MECP2	P51608	486 aa	Known RBP	4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	SUB1	P53999	127 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	NCS1	P62166	190 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	RHOG	P84095	191 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	IL18	Q14116	193 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	DEFB136	Q30KP8	78 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	OR2B11	Q5JQS5	317 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	OR4A47	Q6IF82	309 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	LCN12	Q6JVE5	192 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	ETV3L	Q6ZN32	361 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	IDO2	Q6ZQW0	420 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	ZNF818P	Q6ZRF7	136 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	H2BFWT	Q7Z2G1	175 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	C5orf24	Q7Z6I8	188 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	GTSCR1	Q86UQ5	136 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	CLVS1	Q8IUQ0	354 aa	Predicted RBP	4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	PUSL1	Q8N0Z8	303 aa	Known RBP	4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	ADAD2	Q8NCV1	583 aa	Known RBP	4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	OR1L8	Q8NGR8	309 aa		4.35	□□□□□ -1.71
CLSTN3-215	ENST00000544584	OR2K2	Q8NGT1	345 aa		4.35	□□□□□ -1.71

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