RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 RPL27AP46776 148 aaKnown RBP16.94■□□□□ 0.3
CDKN3-207ENST00000543789 OR10A3P58181 314 aa16.94■□□□□ 0.3
CDKN3-207ENST00000543789 ANKRD55Q3KP44 614 aa16.94■□□□□ 0.3
CDKN3-207ENST00000543789 C19orf35Q6ZS72 473 aa16.94■□□□□ 0.3
CDKN3-207ENST00000543789 UXS1Q8NBZ7 420 aa16.94■□□□□ 0.3
CDKN3-207ENST00000543789 CCDC140Q96MF4 163 aa16.94■□□□□ 0.3
CDKN3-207ENST00000543789 FANCD2OSQ96PS1 177 aa16.94■□□□□ 0.3
CDKN3-207ENST00000543789 FYTTD1Q96QD9 318 aaKnown RBP16.94■□□□□ 0.3
CDKN3-207ENST00000543789 OR2A7Q96R45 310 aa16.94■□□□□ 0.3
CDKN3-207ENST00000543789 ST6GALNAC5Q9BVH7 336 aa16.94■□□□□ 0.3
CDKN3-207ENST00000543789 TRAV1-2A0A0B4J238 106 aa16.93■□□□□ 0.3
CDKN3-207ENST00000543789 TMEM213A2RRL7 107 aa16.93■□□□□ 0.3
CDKN3-207ENST00000543789 E7EUB6 86 aa16.93■□□□□ 0.3
CDKN3-207ENST00000543789 HLA-DQB1P01920 261 aa16.93■□□□□ 0.3
CDKN3-207ENST00000543789 NFYAP23511 347 aaPredicted RBP16.93■□□□□ 0.3
CDKN3-207ENST00000543789 ARL6IP1Q15041 203 aa16.93■□□□□ 0.3
CDKN3-207ENST00000543789 MLXQ9UH92 298 aa16.93■□□□□ 0.3
CDKN3-207ENST00000543789 ELF5Q9UKW6 265 aaPredicted RBP16.93■□□□□ 0.3
CDKN3-207ENST00000543789 KBTBD11O94819 623 aa16.92■□□□□ 0.3
CDKN3-207ENST00000543789 LY6G6CO95867 125 aa16.92■□□□□ 0.3
CDKN3-207ENST00000543789 DHFRP00374 187 aa16.92■□□□□ 0.3
CDKN3-207ENST00000543789 IGLV2-14P01704 120 aa16.92■□□□□ 0.3
CDKN3-207ENST00000543789 CRYGCP07315 174 aa16.92■□□□□ 0.3
CDKN3-207ENST00000543789 ZNF735P0CB33 412 aa16.92■□□□□ 0.3
CDKN3-207ENST00000543789 MAS1LP35410 378 aa16.92■□□□□ 0.3
CDKN3-207ENST00000543789 SSX1Q16384 188 aa16.92■□□□□ 0.3
CDKN3-207ENST00000543789 OR4A47Q6IF82 309 aa16.92■□□□□ 0.3
CDKN3-207ENST00000543789 OR4S2Q8NH73 311 aa16.92■□□□□ 0.3
CDKN3-207ENST00000543789 TMEM167AQ8TBQ9 72 aa16.92■□□□□ 0.3
CDKN3-207ENST00000543789 EEF1AKMT3Q96AZ1 226 aa16.92■□□□□ 0.3
CDKN3-207ENST00000543789 ATG5Q9H1Y0 275 aa16.92■□□□□ 0.3
CDKN3-207ENST00000543789 S4R3C0 116 aa16.92■□□□□ 0.3
CDKN3-207ENST00000543789 SCAF4O95104 1147 aaKnown RBP16.91■□□□□ 0.3
CDKN3-207ENST00000543789 PSMB6P28072 239 aa16.91■□□□□ 0.3
CDKN3-207ENST00000543789 CDNFQ49AH0 187 aa16.91■□□□□ 0.3
CDKN3-207ENST00000543789 PRSS48Q7RTY5 328 aa16.91■□□□□ 0.3
CDKN3-207ENST00000543789 PUSL1Q8N0Z8 303 aaKnown RBP16.91■□□□□ 0.3
CDKN3-207ENST00000543789 HSD17B10Q99714 261 aaKnown RBP16.91■□□□□ 0.3
CDKN3-207ENST00000543789 A0A1B0GW64 132 aa16.9■□□□□ 0.3
CDKN3-207ENST00000543789 CXorf65A6NEN9 183 aa16.9■□□□□ 0.3
CDKN3-207ENST00000543789 A8MWP6 167 aa16.9■□□□□ 0.3
CDKN3-207ENST00000543789 AREGP15514 252 aa16.9■□□□□ 0.3
CDKN3-207ENST00000543789 HIST1H1BP16401 226 aaKnown RBP16.9■□□□□ 0.3
CDKN3-207ENST00000543789 KLK9Q2XQG4 91 aa16.9■□□□□ 0.3
CDKN3-207ENST00000543789 TM4SF20Q53R12 229 aa16.9■□□□□ 0.3
CDKN3-207ENST00000543789 TCTEX1D2Q8WW35 142 aa16.9■□□□□ 0.3
CDKN3-207ENST00000543789 DCSTAMPQ9H295 470 aa16.9■□□□□ 0.3
CDKN3-207ENST00000543789 KLK9Q9UKQ9 250 aa16.9■□□□□ 0.3
CDKN3-207ENST00000543789 SPATA2Q9UM82 520 aa16.9■□□□□ 0.3
CDKN3-207ENST00000543789 IGKV1D-13A0A0B4J2D9 117 aa16.89■□□□□ 0.29
CDKN3-207ENST00000543789 CLEC3BP05452 202 aa16.89■□□□□ 0.29
CDKN3-207ENST00000543789 IGKV1-13P0DP09 117 aa16.89■□□□□ 0.29
CDKN3-207ENST00000543789 DEFA4P12838 97 aa16.89■□□□□ 0.29
CDKN3-207ENST00000543789 CTRB1P17538 263 aa16.89■□□□□ 0.29
CDKN3-207ENST00000543789 CRHBPP24387 322 aa16.89■□□□□ 0.29
CDKN3-207ENST00000543789 MYL9P24844 172 aa16.89■□□□□ 0.29
CDKN3-207ENST00000543789 PMS2P11Q13670 270 aa16.89■□□□□ 0.29
CDKN3-207ENST00000543789 HACD4Q5VWC8 232 aa16.89■□□□□ 0.29
CDKN3-207ENST00000543789 CTRB2Q6GPI1 263 aa16.89■□□□□ 0.29
CDKN3-207ENST00000543789 BTNL8Q6UX41 500 aa16.89■□□□□ 0.29
CDKN3-207ENST00000543789 TRBV7-1A0A0A6YYK4 115 aa16.88■□□□□ 0.29
CDKN3-207ENST00000543789 TRAV25A0A0B4J276 109 aa16.88■□□□□ 0.29
CDKN3-207ENST00000543789 RAB3BP20337 219 aa16.88■□□□□ 0.29
CDKN3-207ENST00000543789 BRWD1-AS2P59051 145 aa16.88■□□□□ 0.29
CDKN3-207ENST00000543789 EIF4EBP1Q13541 118 aaPredicted RBP16.88■□□□□ 0.29
CDKN3-207ENST00000543789 CNIH2Q6PI25 160 aa16.88■□□□□ 0.29
CDKN3-207ENST00000543789 RBPMS2Q6ZRY4 209 aaKnown RBP16.88■□□□□ 0.29
CDKN3-207ENST00000543789 MFSD4AQ8N468 514 aa16.88■□□□□ 0.29
CDKN3-207ENST00000543789 MARC2Q969Z3 335 aa16.88■□□□□ 0.29
CDKN3-207ENST00000543789 NUPR2A6NF83 97 aa16.87■□□□□ 0.29
CDKN3-207ENST00000543789 HRASP01112 189 aa16.87■□□□□ 0.29
CDKN3-207ENST00000543789 C8orf88P0DMB2 117 aa16.87■□□□□ 0.29
CDKN3-207ENST00000543789 AQP4P55087 323 aa16.87■□□□□ 0.29
CDKN3-207ENST00000543789 RPL8P62917 257 aaKnown RBP16.87■□□□□ 0.29
CDKN3-207ENST00000543789 SSX9Q7RTT3 188 aa16.87■□□□□ 0.29
CDKN3-207ENST00000543789 OR1L6Q8NGR2 347 aa16.87■□□□□ 0.29
CDKN3-207ENST00000543789 CXorf58Q96LI9 332 aa16.87■□□□□ 0.29
CDKN3-207ENST00000543789 TAS2R8Q9NYW2 309 aa16.87■□□□□ 0.29
CDKN3-207ENST00000543789 A0A0J9YWU9 116 aa16.86■□□□□ 0.29
CDKN3-207ENST00000543789 REG1AP05451 166 aa16.86■□□□□ 0.29
CDKN3-207ENST00000543789 ZNF585BQ52M93 769 aa16.86■□□□□ 0.29
CDKN3-207ENST00000543789 UNQ9165/PRO28630Q6UXU0 137 aa16.86■□□□□ 0.29
CDKN3-207ENST00000543789 ZNF66Q6ZN08 573 aa16.86■□□□□ 0.29
CDKN3-207ENST00000543789 WFDC3Q8IUB2 231 aa16.86■□□□□ 0.29
CDKN3-207ENST00000543789 MRPL27Q9P0M9 148 aaKnown RBP16.86■□□□□ 0.29
CDKN3-207ENST00000543789 IGLV11-55A0A075B6I3 123 aa16.85■□□□□ 0.29
CDKN3-207ENST00000543789 TRDV1A0A1B0GX56 115 aa16.85■□□□□ 0.29
CDKN3-207ENST00000543789 MFSD2BA6NFX1 497 aa16.85■□□□□ 0.29
CDKN3-207ENST00000543789 HLA-GP17693 338 aa16.85■□□□□ 0.29
CDKN3-207ENST00000543789 GALP22466 123 aa16.85■□□□□ 0.29
CDKN3-207ENST00000543789 BMI1P35226 326 aa16.85■□□□□ 0.29
CDKN3-207ENST00000543789 TNFRSF9Q07011 255 aa16.85■□□□□ 0.29
CDKN3-207ENST00000543789 ZNF367Q7RTV3 350 aa16.85■□□□□ 0.29
CDKN3-207ENST00000543789 SLC38A6Q8IZM9 456 aa16.85■□□□□ 0.29
CDKN3-207ENST00000543789 TP53TG1Q9Y2A0 90 aa16.85■□□□□ 0.29
CDKN3-207ENST00000543789 SPRY2O43597 315 aa16.84■□□□□ 0.29
CDKN3-207ENST00000543789 MYOD1P15172 320 aa16.84■□□□□ 0.29
CDKN3-207ENST00000543789 APOC4P55056 127 aa16.84■□□□□ 0.29
CDKN3-207ENST00000543789 CEMP1Q6PRD7 247 aaPredicted RBP16.84■□□□□ 0.29
CDKN3-207ENST00000543789 Q6ZWC4 215 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms