RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 MMP24Q9Y5R2 645 aa9.5□□□□□ -0.89
DDB1-223ENST00000543658 TET2Q6N021 2002 aaPredicted RBP9.49□□□□□ -0.89
DDB1-223ENST00000543658 C5orf51A6NDU8 294 aa9.49□□□□□ -0.89
DDB1-223ENST00000543658 SRRM4A7MD48 611 aaKnown RBP9.49□□□□□ -0.89
DDB1-223ENST00000543658 TRIM77I1YAP6 450 aa9.49□□□□□ -0.89
DDB1-223ENST00000543658 GOSR2O14653 212 aa9.49□□□□□ -0.89
DDB1-223ENST00000543658 IGKV1-39P01597 117 aa9.49□□□□□ -0.89
DDB1-223ENST00000543658 IGLV2-23P01705 113 aa9.49□□□□□ -0.89
DDB1-223ENST00000543658 IGKV1D-39P04432 117 aa9.49□□□□□ -0.89
DDB1-223ENST00000543658 GNB1P62873 340 aa9.49□□□□□ -0.89
DDB1-223ENST00000543658 TNXAQ16473 311 aa9.49□□□□□ -0.89
DDB1-223ENST00000543658 POU2AF1Q16633 256 aa9.49□□□□□ -0.89
DDB1-223ENST00000543658 C5orf64Q2M2E5 130 aa9.49□□□□□ -0.89
DDB1-223ENST00000543658 C9orf152Q5JTZ5 239 aa9.49□□□□□ -0.89
DDB1-223ENST00000543658 GGNBP1Q5YKI7 109 aa9.49□□□□□ -0.89
DDB1-223ENST00000543658 GSG1LQ6UXU4 331 aa9.49□□□□□ -0.89
DDB1-223ENST00000543658 LYZL2Q7Z4W2 148 aa9.49□□□□□ -0.89
DDB1-223ENST00000543658 PPP1R27Q86WC6 154 aa9.49□□□□□ -0.89
DDB1-223ENST00000543658 MMD2Q8IY49 270 aa9.49□□□□□ -0.89
DDB1-223ENST00000543658 PUSL1Q8N0Z8 303 aaKnown RBP9.49□□□□□ -0.89
DDB1-223ENST00000543658 OR1S1Q8NH92 325 aa9.49□□□□□ -0.89
DDB1-223ENST00000543658 ABHD5Q8WTS1 349 aa9.49□□□□□ -0.89
DDB1-223ENST00000543658 RITA1Q96K30 269 aa9.49□□□□□ -0.89
DDB1-223ENST00000543658 CHIAQ9BZP6 476 aa9.49□□□□□ -0.89
DDB1-223ENST00000543658 NPFFR1Q9GZQ6 430 aa9.49□□□□□ -0.89
DDB1-223ENST00000543658 A0A0B4J293 547 aa9.48□□□□□ -0.89
DDB1-223ENST00000543658 C13orf42A0A1B0GVH6 325 aa9.48□□□□□ -0.89
DDB1-223ENST00000543658 GPR137BO60478 399 aa9.48□□□□□ -0.89
DDB1-223ENST00000543658 ADAP1O75689 374 aa9.48□□□□□ -0.89
DDB1-223ENST00000543658 CNIH1O95406 144 aa9.48□□□□□ -0.89
DDB1-223ENST00000543658 IGKV1-5P01602 117 aa9.48□□□□□ -0.89
DDB1-223ENST00000543658 SULT1A3P0DMM9 295 aa9.48□□□□□ -0.89
DDB1-223ENST00000543658 SULT1A4P0DMN0 295 aa9.48□□□□□ -0.89
DDB1-223ENST00000543658 MAS1LP35410 378 aa9.48□□□□□ -0.89
DDB1-223ENST00000543658 RPL8P62917 257 aaKnown RBP9.48□□□□□ -0.89
DDB1-223ENST00000543658 TUSC1Q2TAM9 212 aa9.48□□□□□ -0.89
DDB1-223ENST00000543658 C5orf56Q8N8D9 126 aa9.48□□□□□ -0.89
DDB1-223ENST00000543658 Q8N9W7 124 aa9.48□□□□□ -0.89
DDB1-223ENST00000543658 TMEM167AQ8TBQ9 72 aa9.48□□□□□ -0.89
DDB1-223ENST00000543658 COMMD5Q9GZQ3 224 aa9.48□□□□□ -0.89
DDB1-223ENST00000543658 FKBP11Q9NYL4 201 aa9.48□□□□□ -0.89
DDB1-223ENST00000543658 MGAT4CQ9UBM8 478 aa9.48□□□□□ -0.89
DDB1-223ENST00000543658 CACNG5Q9UF02 275 aa9.48□□□□□ -0.89
DDB1-223ENST00000543658 PRNDQ9UKY0 176 aa9.48□□□□□ -0.89
DDB1-223ENST00000543658 SIGLEC9Q9Y336 463 aa9.48□□□□□ -0.89
DDB1-223ENST00000543658 hCG_2014768A0A024R1R8 64 aa9.47□□□□□ -0.89
DDB1-223ENST00000543658 CLDN34H7C241 214 aa9.47□□□□□ -0.89
DDB1-223ENST00000543658 UPK2O00526 184 aa9.47□□□□□ -0.89
DDB1-223ENST00000543658 CCSO14618 274 aa9.47□□□□□ -0.89
DDB1-223ENST00000543658 KCNAB3O43448 404 aa9.47□□□□□ -0.89
DDB1-223ENST00000543658 CHST1O43916 411 aa9.47□□□□□ -0.89
DDB1-223ENST00000543658 CA2P00918 260 aa9.47□□□□□ -0.89
DDB1-223ENST00000543658 OR9G9P0C7N8 305 aa9.47□□□□□ -0.89
DDB1-223ENST00000543658 OR2B8PP59922 312 aa9.47□□□□□ -0.89
DDB1-223ENST00000543658 RPL15P61313 204 aaKnown RBP9.47□□□□□ -0.89
DDB1-223ENST00000543658 UBA52P62987 128 aaKnown RBP9.47□□□□□ -0.89
DDB1-223ENST00000543658 SMCO1Q147U7 214 aa9.47□□□□□ -0.89
DDB1-223ENST00000543658 FBLN7Q53RD9 439 aa9.47□□□□□ -0.89
DDB1-223ENST00000543658 Q6ZNX1 250 aa9.47□□□□□ -0.89
DDB1-223ENST00000543658 FAM71E2Q8N5Q1 922 aa9.47□□□□□ -0.89
DDB1-223ENST00000543658 GPR146Q96CH1 333 aa9.47□□□□□ -0.89
DDB1-223ENST00000543658 PRSS22Q9GZN4 317 aa9.47□□□□□ -0.89
DDB1-223ENST00000543658 TPSG1Q9NRR2 321 aa9.47□□□□□ -0.89
DDB1-223ENST00000543658 CACFD1Q9UGQ2 172 aa9.47□□□□□ -0.89
DDB1-223ENST00000543658 A0A1B0GU03 582 aa9.46□□□□□ -0.9
DDB1-223ENST00000543658 DBX1A6NMT0 343 aa9.46□□□□□ -0.9
DDB1-223ENST00000543658 C15orf61A6NNL5 157 aa9.46□□□□□ -0.9
DDB1-223ENST00000543658 SCGB1D2O95969 90 aa9.46□□□□□ -0.9
DDB1-223ENST00000543658 IFNA17P01571 189 aa9.46□□□□□ -0.9
DDB1-223ENST00000543658 HLA-DRB1P01911 266 aa9.46□□□□□ -0.9
DDB1-223ENST00000543658 RNASE1P07998 156 aaKnown RBP9.46□□□□□ -0.9
DDB1-223ENST00000543658 FGF2P09038 288 aa9.46□□□□□ -0.9
DDB1-223ENST00000543658 SLC25A6P12236 298 aa9.46□□□□□ -0.9
DDB1-223ENST00000543658 HLA-GP17693 338 aa9.46□□□□□ -0.9
DDB1-223ENST00000543658 RRAS2P62070 204 aaPredicted RBP9.46□□□□□ -0.9
DDB1-223ENST00000543658 PRSS8Q16651 343 aa9.46□□□□□ -0.9
DDB1-223ENST00000543658 IAH1Q2TAA2 248 aaPredicted RBP9.46□□□□□ -0.9
DDB1-223ENST00000543658 NMSQ5H8A3 153 aa9.46□□□□□ -0.9
DDB1-223ENST00000543658 FOXRED2Q8IWF2 684 aa9.46□□□□□ -0.9
DDB1-223ENST00000543658 MRPL41Q8IXM3 137 aaKnown RBP9.46□□□□□ -0.9
DDB1-223ENST00000543658 CADM3Q8N126 398 aa9.46□□□□□ -0.9
DDB1-223ENST00000543658 ZNF430Q9H8G1 570 aaPredicted RBP9.46□□□□□ -0.9
DDB1-223ENST00000543658 ENY2Q9NPA8 101 aa9.46□□□□□ -0.9
DDB1-223ENST00000543658 ESM1Q9NQ30 184 aa9.46□□□□□ -0.9
DDB1-223ENST00000543658 PLSCR3Q9NRY6 295 aa9.46□□□□□ -0.9
DDB1-223ENST00000543658 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.46□□□□□ -0.9
DDB1-223ENST00000543658 NSG2Q9Y328 171 aa9.46□□□□□ -0.9
DDB1-223ENST00000543658 OR51B2Q9Y5P1 312 aa9.46□□□□□ -0.9
DDB1-223ENST00000543658 NSD1Q96L73 2696 aaPredicted RBP9.46□□□□□ -0.9
DDB1-223ENST00000543658 A0A0G2JRQ6 117 aa9.45□□□□□ -0.9
DDB1-223ENST00000543658 WRBO00258 174 aa9.45□□□□□ -0.9
DDB1-223ENST00000543658 PLXNB1O43157 2135 aa9.45□□□□□ -0.9
DDB1-223ENST00000543658 CRYGBP07316 175 aa9.45□□□□□ -0.9
DDB1-223ENST00000543658 RPL27AP46776 148 aaKnown RBP9.45□□□□□ -0.9
DDB1-223ENST00000543658 RELBQ01201 579 aa9.45□□□□□ -0.9
DDB1-223ENST00000543658 FXYD3Q14802 87 aa9.45□□□□□ -0.9
DDB1-223ENST00000543658 IZUMO4Q1ZYL8 232 aa9.45□□□□□ -0.9
DDB1-223ENST00000543658 SLC35E3Q7Z769 313 aa9.45□□□□□ -0.9
DDB1-223ENST00000543658 OR5M8Q8NGP6 311 aa9.45□□□□□ -0.9
DDB1-223ENST00000543658 OR1L8Q8NGR8 309 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms