RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 C17orf100A8MU93 164 aa11.45□□□□□ -0.58
MSH2-206ENST00000543555 ZNF727A8MUV8 499 aa11.45□□□□□ -0.58
MSH2-206ENST00000543555 THBS3P49746 956 aa11.45□□□□□ -0.58
MSH2-206ENST00000543555 LINC00518Q8N0U6 118 aa11.45□□□□□ -0.58
MSH2-206ENST00000543555 CORO2AQ92828 525 aa11.45□□□□□ -0.58
MSH2-206ENST00000543555 RAI1Q7Z5J4 1906 aaPredicted RBP11.45□□□□□ -0.58
MSH2-206ENST00000543555 VDAC2P45880 294 aaPredicted RBP11.45□□□□□ -0.58
MSH2-206ENST00000543555 RPP30P78346 268 aaKnown RBP11.45□□□□□ -0.58
MSH2-206ENST00000543555 MRPS11P82912 194 aaKnown RBP11.45□□□□□ -0.58
MSH2-206ENST00000543555 LYG1Q8N1E2 194 aa11.45□□□□□ -0.58
MSH2-206ENST00000543555 MALSU1Q96EH3 234 aa11.45□□□□□ -0.58
MSH2-206ENST00000543555 C17orf112F2Z3M2 114 aa11.44□□□□□ -0.58
MSH2-206ENST00000543555 AKR1D1P51857 326 aa11.44□□□□□ -0.58
MSH2-206ENST00000543555 RBMS3Q6XE24 437 aaKnown RBP11.44□□□□□ -0.58
MSH2-206ENST00000543555 HEYLQ9NQ87 328 aaPredicted RBP11.44□□□□□ -0.58
MSH2-206ENST00000543555 WDR83OSQ9Y284 106 aa11.44□□□□□ -0.58
MSH2-206ENST00000543555 HMGB3O15347 200 aaKnown RBP11.44□□□□□ -0.58
MSH2-206ENST00000543555 IFNA10P01566 189 aa11.44□□□□□ -0.58
MSH2-206ENST00000543555 CD1BP29016 333 aa11.44□□□□□ -0.58
MSH2-206ENST00000543555 RPL35P42766 123 aaKnown RBP11.44□□□□□ -0.58
MSH2-206ENST00000543555 TLE1Q04724 770 aa11.44□□□□□ -0.58
MSH2-206ENST00000543555 TMEM30BQ3MIR4 351 aa11.44□□□□□ -0.58
MSH2-206ENST00000543555 ADAM5Q6NVV9 412 aa11.44□□□□□ -0.58
MSH2-206ENST00000543555 ACTR3CQ9C0K3 210 aaPredicted RBP11.44□□□□□ -0.58
MSH2-206ENST00000543555 FLNCQ14315 2725 aa11.44□□□□□ -0.58
MSH2-206ENST00000543555 MMP23AO75900 390 aa11.44□□□□□ -0.58
MSH2-206ENST00000543555 GNG10P50151 68 aa11.44□□□□□ -0.58
MSH2-206ENST00000543555 HEPN1Q6WQI6 88 aa11.44□□□□□ -0.58
MSH2-206ENST00000543555 Q8N7P7 452 aa11.44□□□□□ -0.58
MSH2-206ENST00000543555 ZNF383Q8NA42 475 aa11.44□□□□□ -0.58
MSH2-206ENST00000543555 ADTRPQ96IZ2 230 aa11.44□□□□□ -0.58
MSH2-206ENST00000543555 RALYQ9UKM9 306 aaKnown RBP11.44□□□□□ -0.58
MSH2-206ENST00000543555 TCF19Q9Y242 345 aa11.44□□□□□ -0.58
MSH2-206ENST00000543555 CHD6Q8TD26 2715 aa11.43□□□□□ -0.58
MSH2-206ENST00000543555 NKX6-3A6NJ46 265 aa11.43□□□□□ -0.58
MSH2-206ENST00000543555 TMPRSS2O15393 492 aa11.43□□□□□ -0.58
MSH2-206ENST00000543555 PNRC1Q12796 327 aaPredicted RBP11.43□□□□□ -0.58
MSH2-206ENST00000543555 SSX8Q7RTT4 187 aa11.43□□□□□ -0.58
MSH2-206ENST00000543555 ZCCHC24Q8N2G6 241 aaKnown RBP11.43□□□□□ -0.58
MSH2-206ENST00000543555 RHOVQ96L33 236 aa11.43□□□□□ -0.58
MSH2-206ENST00000543555 PRORYQ9H606 182 aa11.43□□□□□ -0.58
MSH2-206ENST00000543555 RPUSD1Q9UJJ7 312 aaKnown RBP11.43□□□□□ -0.58
MSH2-206ENST00000543555 DSCAML1Q8TD84 2053 aa11.43□□□□□ -0.58
MSH2-206ENST00000543555 hADV38S2A0JD32 116 aa11.43□□□□□ -0.58
MSH2-206ENST00000543555 C15orf61A6NNL5 157 aa11.43□□□□□ -0.58
MSH2-206ENST00000543555 B4DEV8 164 aa11.43□□□□□ -0.58
MSH2-206ENST00000543555 RRHO14718 337 aa11.43□□□□□ -0.58
MSH2-206ENST00000543555 TMPRSS5Q9H3S3 457 aa11.43□□□□□ -0.58
MSH2-206ENST00000543555 SIRT7Q9NRC8 400 aa11.43□□□□□ -0.58
MSH2-206ENST00000543555 DOCK11Q5JSL3 2073 aa11.42□□□□□ -0.58
MSH2-206ENST00000543555 TRGV8A0A0C4DH27 118 aa11.42□□□□□ -0.58
MSH2-206ENST00000543555 IFNA4P05014 189 aa11.42□□□□□ -0.58
MSH2-206ENST00000543555 NDUFB7P17568 137 aa11.42□□□□□ -0.58
MSH2-206ENST00000543555 CD81P60033 236 aa11.42□□□□□ -0.58
MSH2-206ENST00000543555 MEF2BQ02080 365 aaPredicted RBP11.42□□□□□ -0.58
MSH2-206ENST00000543555 OR4A47Q6IF82 309 aa11.42□□□□□ -0.58
MSH2-206ENST00000543555 RAB24Q969Q5 203 aa11.42□□□□□ -0.58
MSH2-206ENST00000543555 GGACTQ9BVM4 153 aa11.42□□□□□ -0.58
MSH2-206ENST00000543555 LINC00312Q9Y6C7 94 aa11.42□□□□□ -0.58
MSH2-206ENST00000543555 DYSFO75923 2080 aa11.42□□□□□ -0.58
MSH2-206ENST00000543555 ICE1Q9Y2F5 2266 aa11.42□□□□□ -0.58
MSH2-206ENST00000543555 CXorf65A6NEN9 183 aa11.42□□□□□ -0.58
MSH2-206ENST00000543555 SNRPEP62304 92 aaKnown RBP11.42□□□□□ -0.58
MSH2-206ENST00000543555 SLC25A48Q6ZT89 311 aaKnown RBP11.42□□□□□ -0.58
MSH2-206ENST00000543555 MYO18BQ8IUG5 2567 aa11.42□□□□□ -0.58
MSH2-206ENST00000543555 TANC2Q9HCD6 1990 aa11.42□□□□□ -0.58
MSH2-206ENST00000543555 UTP20O75691 2785 aaKnown RBP11.42□□□□□ -0.58
MSH2-206ENST00000543555 LRBAP50851 2863 aa11.42□□□□□ -0.58
MSH2-206ENST00000543555 TRAV38-1A0A0B4J264 116 aa11.41□□□□□ -0.58
MSH2-206ENST00000543555 PRSS46E5RG02 174 aa11.41□□□□□ -0.58
MSH2-206ENST00000543555 CYB5BO43169 146 aa11.41□□□□□ -0.58
MSH2-206ENST00000543555 PRB1P04280 392 aa11.41□□□□□ -0.58
MSH2-206ENST00000543555 ACOT6Q3I5F7 207 aaPredicted RBP11.41□□□□□ -0.58
MSH2-206ENST00000543555 ABHD12Q8N2K0 398 aa11.41□□□□□ -0.58
MSH2-206ENST00000543555 TMEM170AQ8WVE7 144 aa11.41□□□□□ -0.58
MSH2-206ENST00000543555 SAP30LQ9HAJ7 183 aa11.41□□□□□ -0.58
MSH2-206ENST00000543555 FOXA2Q9Y261 457 aaPredicted RBP11.41□□□□□ -0.58
MSH2-206ENST00000543555 ZNF462Q96JM2 2506 aa11.41□□□□□ -0.58
MSH2-206ENST00000543555 HCFC1P51610 2035 aa11.41□□□□□ -0.58
MSH2-206ENST00000543555 PLCE1Q9P212 2302 aa11.41□□□□□ -0.58
MSH2-206ENST00000543555 S100A6P06703 90 aa11.41□□□□□ -0.58
MSH2-206ENST00000543555 PSMB3P49720 205 aa11.41□□□□□ -0.58
MSH2-206ENST00000543555 ELOBQ15370 118 aa11.41□□□□□ -0.58
MSH2-206ENST00000543555 POU2AF1Q16633 256 aa11.41□□□□□ -0.58
MSH2-206ENST00000543555 SDF2L1Q9HCN8 221 aa11.41□□□□□ -0.58
MSH2-206ENST00000543555 SLC25A10Q9UBX3 287 aaPredicted RBP11.41□□□□□ -0.58
MSH2-206ENST00000543555 SMCO3A2RU48 225 aa11.41□□□□□ -0.58
MSH2-206ENST00000543555 C5orf52A6NGY3 159 aa11.41□□□□□ -0.58
MSH2-206ENST00000543555 WDR25Q64LD2 544 aaPredicted RBP11.41□□□□□ -0.58
MSH2-206ENST00000543555 ZNF343Q6P1L6 599 aa11.41□□□□□ -0.58
MSH2-206ENST00000543555 C1QL4Q86Z23 238 aa11.41□□□□□ -0.58
MSH2-206ENST00000543555 MANBALQ9NQG1 85 aa11.41□□□□□ -0.58
MSH2-206ENST00000543555 TMEM14BQ9NUH8 114 aa11.41□□□□□ -0.58
MSH2-206ENST00000543555 MPDU1O75352 247 aa11.4□□□□□ -0.58
MSH2-206ENST00000543555 CDC34P49427 236 aaPredicted RBP11.4□□□□□ -0.58
MSH2-206ENST00000543555 MEF2CQ06413 473 aaPredicted RBP11.4□□□□□ -0.58
MSH2-206ENST00000543555 TREML4Q6UXN2 200 aa11.4□□□□□ -0.58
MSH2-206ENST00000543555 Q8WTZ3 238 aa11.4□□□□□ -0.58
MSH2-206ENST00000543555 WFIKKN1Q96NZ8 548 aa11.4□□□□□ -0.58
MSH2-206ENST00000543555 HIVEP3Q5T1R4 2406 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms