RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 GP6Q9HCN6 339 aa11.15□□□□□ -0.62
TNC-212ENST00000542877 NKX2-8O15522 239 aa11.15□□□□□ -0.62
TNC-212ENST00000542877 CDCP2Q5VXM1 449 aa11.15□□□□□ -0.62
TNC-212ENST00000542877 LEAP2Q969E1 77 aa11.15□□□□□ -0.62
TNC-212ENST00000542877 AUP1Q9Y679 476 aa11.15□□□□□ -0.62
TNC-212ENST00000542877 THSD7AQ9UPZ6 1657 aa11.15□□□□□ -0.62
TNC-212ENST00000542877 H7C2G1 150 aa11.15□□□□□ -0.63
TNC-212ENST00000542877 TUBA4BQ9H853 241 aa11.15□□□□□ -0.63
TNC-212ENST00000542877 PILRBQ9UKJ0 227 aa11.15□□□□□ -0.63
TNC-212ENST00000542877 TRAV14DV4A0A0A6YYC5 116 aa11.14□□□□□ -0.63
TNC-212ENST00000542877 A0A1W2PQM1 296 aa11.14□□□□□ -0.63
TNC-212ENST00000542877 CGB1A6NKQ9 187 aa11.14□□□□□ -0.63
TNC-212ENST00000542877 SYNGR3O43761 229 aa11.14□□□□□ -0.63
TNC-212ENST00000542877 GOLT1AQ6ZVE7 132 aa11.14□□□□□ -0.63
TNC-212ENST00000542877 COPS9Q8WXC6 57 aa11.14□□□□□ -0.63
TNC-212ENST00000542877 SSBP3Q9BWW4 388 aaPredicted RBP11.14□□□□□ -0.63
TNC-212ENST00000542877 EGR1P18146 543 aa11.14□□□□□ -0.63
TNC-212ENST00000542877 STARD6P59095 220 aa11.14□□□□□ -0.63
TNC-212ENST00000542877 CLEC7AQ9BXN2 247 aa11.14□□□□□ -0.63
TNC-212ENST00000542877 ATAD5Q96QE3 1844 aa11.14□□□□□ -0.63
TNC-212ENST00000542877 TRAV9-1A0A075B6T8 112 aa11.14□□□□□ -0.63
TNC-212ENST00000542877 IGFBP3P17936 291 aaPredicted RBP11.14□□□□□ -0.63
TNC-212ENST00000542877 NRN1LQ496H8 165 aa11.14□□□□□ -0.63
TNC-212ENST00000542877 OR4D5Q8NGN0 318 aa11.14□□□□□ -0.63
TNC-212ENST00000542877 FGF11Q92914 225 aa11.14□□□□□ -0.63
TNC-212ENST00000542877 ANKRD31Q8N7Z5 1873 aa11.14□□□□□ -0.63
TNC-212ENST00000542877 A0A1W2PR77 199 aa11.14□□□□□ -0.63
TNC-212ENST00000542877 RELQ04864 619 aaPredicted RBP11.14□□□□□ -0.63
TNC-212ENST00000542877 NPIPB7O75200 414 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 TGIF1Q15583 401 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 LINC00305Q7Z4B0 112 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 ATOH7Q8N100 152 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 RAXQ9Y2V3 346 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 LOC105371267A0A1B0GV96 52 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 NPIPB11E5RHQ5 1161 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 REG1AP05451 166 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 TFPI2P48307 235 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 MBNL2Q5VZF2 373 aaKnown RBP11.13□□□□□ -0.63
TNC-212ENST00000542877 BIVMQ86UB2 503 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.13□□□□□ -0.63
TNC-212ENST00000542877 C7orf71A4D174 169 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 CTAG1AP78358 180 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 CLEC2AQ6UVW9 174 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 OSR1Q8TAX0 266 aaPredicted RBP11.13□□□□□ -0.63
TNC-212ENST00000542877 PEF1Q9UBV8 284 aaKnown RBP11.13□□□□□ -0.63
TNC-212ENST00000542877 COL4A5P29400 1685 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 IGKV3D-11A0A0A0MRZ8 115 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 A0A1B0GTI1 187 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 A1L4Q6 167 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 BTCP35070 178 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 CLDND2Q8NHS1 167 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 SGK494Q96LW2 274 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 SDF2L1Q9HCN8 221 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 GSN-AS1Q9NRJ2 163 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 C12orf77C9JDV5 145 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 FTH1P19P0C7X4 201 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 TNFSF10P50591 281 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 DLX6P56179 175 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 Q6ZT83 130 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 GPR82Q96P67 336 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 IFI27L2Q9H2X8 130 aa11.13□□□□□ -0.63
TNC-212ENST00000542877 CHCHD2Q9Y6H1 151 aaPredicted RBP11.13□□□□□ -0.63
TNC-212ENST00000542877 CABIN1Q9Y6J0 2220 aa11.12□□□□□ -0.63
TNC-212ENST00000542877 IGKV1D-43A0A0B4J1Z2 117 aa11.12□□□□□ -0.63
TNC-212ENST00000542877 UBE2L6O14933 153 aa11.12□□□□□ -0.63
TNC-212ENST00000542877 HOXA5P20719 270 aa11.12□□□□□ -0.63
TNC-212ENST00000542877 ARF6P62330 175 aa11.12□□□□□ -0.63
TNC-212ENST00000542877 FAM106AQ4KMX7 169 aa11.12□□□□□ -0.63
TNC-212ENST00000542877 F11RQ9Y624 299 aaKnown RBP11.12□□□□□ -0.63
TNC-212ENST00000542877 H3BTX0 84 aa11.12□□□□□ -0.63
TNC-212ENST00000542877 CIRBPQ14011 172 aaKnown RBP11.12□□□□□ -0.63
TNC-212ENST00000542877 ACP7Q6ZNF0 438 aa11.12□□□□□ -0.63
TNC-212ENST00000542877 DDB2Q92466 427 aa11.12□□□□□ -0.63
TNC-212ENST00000542877 RGPD3A6NKT7 1758 aaPredicted RBP11.12□□□□□ -0.63
TNC-212ENST00000542877 RAMP1O60894 148 aa11.12□□□□□ -0.63
TNC-212ENST00000542877 PRSS8Q16651 343 aa11.12□□□□□ -0.63
TNC-212ENST00000542877 RNFT1Q5M7Z0 435 aa11.12□□□□□ -0.63
TNC-212ENST00000542877 ATP5G2Q06055 141 aa11.12□□□□□ -0.63
TNC-212ENST00000542877 RPL39P5Q59GN2 51 aa11.12□□□□□ -0.63
TNC-212ENST00000542877 PAPPA-AS1Q5QFB9 102 aa11.12□□□□□ -0.63
TNC-212ENST00000542877 SOX21Q9Y651 276 aaPredicted RBP11.12□□□□□ -0.63
TNC-212ENST00000542877 GPX1P07203 203 aa11.11□□□□□ -0.63
TNC-212ENST00000542877 PRSS2P07478 247 aa11.11□□□□□ -0.63
TNC-212ENST00000542877 SMIM13P0DJ93 91 aa11.11□□□□□ -0.63
TNC-212ENST00000542877 STPG1Q5TH74 334 aa11.11□□□□□ -0.63
TNC-212ENST00000542877 RTN4RQ9BZR6 473 aa11.11□□□□□ -0.63
TNC-212ENST00000542877 FBLN5Q9UBX5 448 aa11.11□□□□□ -0.63
TNC-212ENST00000542877 NPPCP23582 126 aa11.11□□□□□ -0.63
TNC-212ENST00000542877 ZNF414Q96IQ9 312 aa11.11□□□□□ -0.63
TNC-212ENST00000542877 KIR2DL4Q99706 377 aa11.11□□□□□ -0.63
TNC-212ENST00000542877 TIMP4Q99727 224 aa11.11□□□□□ -0.63
TNC-212ENST00000542877 C1QTNF5Q9BXJ0 243 aa11.11□□□□□ -0.63
TNC-212ENST00000542877 IL4P05112 153 aa11.11□□□□□ -0.63
TNC-212ENST00000542877 TAS2R60P59551 318 aa11.11□□□□□ -0.63
TNC-212ENST00000542877 TBR1Q16650 682 aa11.11□□□□□ -0.63
TNC-212ENST00000542877 RNF115Q9Y4L5 304 aa11.11□□□□□ -0.63
TNC-212ENST00000542877 NBEAP1P0C6P0 100 aa11.11□□□□□ -0.63
TNC-212ENST00000542877 SCGB1A1P11684 91 aa11.11□□□□□ -0.63
TNC-212ENST00000542877 TSPOP30536 169 aa11.11□□□□□ -0.63
TNC-212ENST00000542877 ATRAIDQ6UW56 229 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms