RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 CEACAM16Q2WEN9 425 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 C6orf99Q4VX62 202 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 PYDC2Q56P42 97 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 TMEM255AQ5JRV8 349 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 HIST2H3PS2Q5TEC6 136 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 CEMP1Q6PRD7 247 aaPredicted RBP2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 ALKAL1Q6UXT8 129 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 GRINAQ7Z429 371 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 ZFP82Q8N141 532 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 C2orf73Q8N5S3 287 aaPredicted RBP2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 DCAF4L2Q8NA75 395 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 PXT1Q8NFP0 134 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 OR10A6Q8NH74 314 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 FAM222BQ8WU58 562 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 RDH5Q92781 318 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 POP5Q969H6 163 aaKnown RBP2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 ANKRD9Q96BM1 317 aaPredicted RBP2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 CMBLQ96DG6 245 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 SMIM12Q96EX1 92 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 PYURFQ96I23 114 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 SMIM8Q96KF7 97 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 OR2M4Q96R27 311 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 METTL26Q96S19 204 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 MGLLQ99685 303 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 HSD17B10Q99714 261 aaKnown RBP2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 NIPSNAP1Q9BPW8 284 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 HDHD3Q9BSH5 251 aaPredicted RBP2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 DDA1Q9BW61 102 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 SFXN3Q9BWM7 321 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 CDCA4Q9BXL8 241 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 ZNF430Q9H8G1 570 aaPredicted RBP2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 TPT1P8Q9HAU6 139 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 DAZ3Q9NR90 486 aaKnown RBP2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 TAS2R13Q9NYV9 303 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 OPN4Q9UHM6 478 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 SMPXQ9UHP9 88 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 DKKL1Q9UK85 242 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 SLC35A3Q9Y2D2 325 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 OR51B4Q9Y5P0 310 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 SNX10Q9Y5X0 201 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 TSC2P49815 1807 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 LRRK1Q38SD2 2015 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 ANKRD36A6QL64 1941 aa2.76□□□□□ -1.97
SFSWAP-211ENST00000542813 MYO7AQ13402 2215 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 SHROOM3Q8TF72 1996 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 IGKV1-27A0A075B6S5 117 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 A0A087WUJ7 227 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 A0A1W2PQL4 384 aaPredicted RBP2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 RBFOX3A6NFN3 312 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 OR51F1A6NGY5 319 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 HMSDA8MTL9 139 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 MCRIP1C9JLW8 97 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 INS-IGF2F8WCM5 200 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 GPR31O00270 319 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 CCL22O00626 93 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 BHLHE40O14503 412 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 TGOLN2O43493 480 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 SYNGR1O43759 233 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 OR2T1O43869 369 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 NDUFS5O43920 106 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 SS18L1O75177 396 aaPredicted RBP2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 OR2J2O76002 312 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 HLA-AP01891 365 aaKnown RBP2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 IGHV4-34P06331 123 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 HIST1H1CP16403 213 aaKnown RBP2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 FGF7P21781 194 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 ZBTB25P24278 435 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 DRD3P35462 400 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 UBE2AP49459 152 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 TMEM33P57088 247 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 ERVS71-1P61550 626 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 RPS25P62851 125 aaKnown RBP2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 PPP3R1P63098 170 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 MRPS10P82664 201 aaKnown RBP2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 BAXQ07812 192 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 IHHQ14623 411 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 PMVKQ15126 192 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 SCGB2B2Q4G0G5 96 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 ATP6AP1LQ52LC2 224 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 MESTQ5EB52 335 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 NCMAPQ5T1S8 102 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 BCL2L15Q5TBC7 163 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 TMEM244Q5VVB8 128 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 TRIQKQ629K1 86 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 OPN5Q6U736 354 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 CLEC19AQ6UXS0 136 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 GSG1LQ6UXU4 331 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 TMEM91Q6ZNR0 172 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 C6orf120Q7Z4R8 191 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 GTSCR1Q86UQ5 136 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 WDFY1Q8IWB7 410 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 BAP18Q8IXM2 172 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 ZCCHC24Q8N2G6 241 aaKnown RBP2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 COQ8AQ8NI60 647 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 BLNKQ8WV28 456 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 RNF133Q8WVZ7 376 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 HIST1H2BAQ96A08 127 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 SLC25A46Q96AG3 418 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 DDIT4LQ96D03 193 aa2.75□□□□□ -1.97
SFSWAP-211ENST00000542813 DIRAS2Q96HU8 199 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms