RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 ST20Q9HBF5 79 aa12.07□□□□□ -0.48
TRPM1-203ENST00000542188 TMEM155Q4W5P6 130 aa12.07□□□□□ -0.48
TRPM1-203ENST00000542188 LHFPL4Q7Z7J7 247 aa12.07□□□□□ -0.48
TRPM1-203ENST00000542188 DLL3Q9NYJ7 618 aa12.07□□□□□ -0.48
TRPM1-203ENST00000542188 M0R2P5 195 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 CD8AP01732 235 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 REG1AP05451 166 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 CCL8P80075 99 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 SRSF1Q07955 248 aaKnown RBP eCLIP12.06□□□□□ -0.48
TRPM1-203ENST00000542188 TMEM86BQ8N661 226 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 TMEM170AQ8WVE7 144 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 EDA2RQ9HAV5 297 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 FER1L6Q2WGJ9 1857 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 TRAV2A0A0B4J234 112 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 NUMA1Q14980 2115 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 HOXB3P14651 431 aaPredicted RBP12.06□□□□□ -0.48
TRPM1-203ENST00000542188 IFITM2Q01629 132 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 P2RY6Q15077 328 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 TMEM42Q69YG0 159 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 ABHD12Q8N2K0 398 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 ITLN1Q8WWA0 313 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 ERG28Q9UKR5 140 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 COL16A1Q07092 1604 aaPredicted RBP12.06□□□□□ -0.48
TRPM1-203ENST00000542188 A0A1W2PRS3 328 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 TOMM40O96008 361 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 NBEAP1P0C6P0 100 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 SPEM2Q0P670 501 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 SIRT4Q9Y6E7 314 aaPredicted RBP12.06□□□□□ -0.48
TRPM1-203ENST00000542188 ATXN7O15265 892 aaPredicted RBP12.06□□□□□ -0.48
TRPM1-203ENST00000542188 STARD6P59095 220 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 FAM219BQ5XKK7 198 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 LHX8Q68G74 356 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 Q6ZS52 159 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 NR2C2APQ86WQ0 139 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 FAM57AQ8TBR7 257 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 OVOL2Q9BRP0 275 aa12.06□□□□□ -0.48
TRPM1-203ENST00000542188 DXOO77932 396 aaKnown RBP12.05□□□□□ -0.48
TRPM1-203ENST00000542188 NTN1O95631 604 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 HBDP02042 147 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 SRP19P09132 144 aaKnown RBP12.05□□□□□ -0.48
TRPM1-203ENST00000542188 TDGF1P3P51864 188 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 DCTN5Q9BTE1 182 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 CHTOPQ9Y3Y2 248 aaKnown RBP12.05□□□□□ -0.48
TRPM1-203ENST00000542188 TRBV5-7A0A0A0MS05 114 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 LINC01549A6NIU2 74 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 ZFP36L2P47974 494 aaKnown RBP12.05□□□□□ -0.48
TRPM1-203ENST00000542188 CLEC7AQ9BXN2 247 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 COX11Q9Y6N1 276 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.05□□□□□ -0.48
TRPM1-203ENST00000542188 LOC105371267A0A1B0GV96 52 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 H2BFSP57053 126 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 ERVK11-1P61568 191 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 DEFB123Q8N688 67 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 ZNF385AQ96PM9 386 aaKnown RBP12.05□□□□□ -0.48
TRPM1-203ENST00000542188 TTTY12Q9BZ98 90 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 TUBA4BQ9H853 241 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 SCN11AQ9UI33 1791 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 PPIAL4CA0A0B4J2A2 164 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 VWC2LB2RUY7 222 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 TNFRSF6BO95407 300 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 IGKCP01834 107 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 PF4P02776 101 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 PPIAL4GP0DN37 164 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 PTGDSP41222 190 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 DCAF10Q5QP82 559 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 RCC1LQ96I51 464 aaKnown RBP12.05□□□□□ -0.48
TRPM1-203ENST00000542188 LINC00587B1AMM8 73 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 NGFRP08138 427 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 ZNF818PQ6ZRF7 136 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 FAM19A2Q8N3H0 131 aa12.05□□□□□ -0.48
TRPM1-203ENST00000542188 MYO5AQ9Y4I1 1855 aaKnown RBP12.04□□□□□ -0.48
TRPM1-203ENST00000542188 CHD4Q14839 1912 aa12.04□□□□□ -0.48
TRPM1-203ENST00000542188 TRBV5-3A0A0A0MS03 114 aa12.04□□□□□ -0.48
TRPM1-203ENST00000542188 CCL21O00585 134 aa12.04□□□□□ -0.48
TRPM1-203ENST00000542188 R4GN57 208 aa12.04□□□□□ -0.48
TRPM1-203ENST00000542188 SCO2A0A1W2PP80 73 aa12.04□□□□□ -0.48
TRPM1-203ENST00000542188 MOSP00540 346 aa12.04□□□□□ -0.48
TRPM1-203ENST00000542188 IGKV3-20P01619 116 aa12.04□□□□□ -0.48
TRPM1-203ENST00000542188 PRSS53Q2L4Q9 553 aa12.04□□□□□ -0.48
TRPM1-203ENST00000542188 LINC01559Q495D7 138 aa12.04□□□□□ -0.48
TRPM1-203ENST00000542188 ZPLD1Q8TCW7 415 aa12.04□□□□□ -0.48
TRPM1-203ENST00000542188 CITED1Q99966 193 aa12.04□□□□□ -0.48
TRPM1-203ENST00000542188 IFI27L2Q9H2X8 130 aa12.04□□□□□ -0.48
TRPM1-203ENST00000542188 FAM60AQ9NP50 221 aa12.04□□□□□ -0.48
TRPM1-203ENST00000542188 NWD2Q9ULI1 1742 aa12.04□□□□□ -0.48
TRPM1-203ENST00000542188 IGHV1OR15-9A0A0B4J2B8 117 aa12.04□□□□□ -0.48
TRPM1-203ENST00000542188 UPK3AO75631 287 aa12.04□□□□□ -0.48
TRPM1-203ENST00000542188 LINC01565O15544 149 aa12.04□□□□□ -0.48
TRPM1-203ENST00000542188 SERF1AO75920 110 aa12.04□□□□□ -0.48
TRPM1-203ENST00000542188 MORN3Q6PF18 240 aaPredicted RBP12.04□□□□□ -0.48
TRPM1-203ENST00000542188 CHCHD1Q96BP2 118 aaKnown RBP12.04□□□□□ -0.48
TRPM1-203ENST00000542188 VKORC1Q9BQB6 163 aa12.04□□□□□ -0.48
TRPM1-203ENST00000542188 YBX2Q9Y2T7 364 aaKnown RBP12.04□□□□□ -0.48
TRPM1-203ENST00000542188 CGAP01215 116 aa12.03□□□□□ -0.48
TRPM1-203ENST00000542188 MAJINQ3KP22 176 aa12.03□□□□□ -0.48
TRPM1-203ENST00000542188 ORMDL2Q53FV1 153 aa12.03□□□□□ -0.48
TRPM1-203ENST00000542188 NRXN3Q9Y4C0 1643 aa12.03□□□□□ -0.48
TRPM1-203ENST00000542188 CENPVQ7Z7K6 275 aaPredicted RBP12.03□□□□□ -0.48
TRPM1-203ENST00000542188 SPINT1O43278 529 aa12.03□□□□□ -0.48
TRPM1-203ENST00000542188 TOPAZ1Q8N9V7 1692 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms