RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 MPPED1O15442 326 aa6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 HPRT1P00492 218 aa6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 RLN1P04808 185 aa6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 CRYGBP07316 175 aa6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 CTSDP07339 412 aaPredicted RBP6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 F2RP25116 425 aa6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 MYCNOSP40205 109 aa6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 INPP1P49441 399 aa6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 UBE2KP61086 200 aa6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 RPL23AP62750 156 aaKnown RBP6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 VMA21Q3ZAQ7 101 aa6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 PHLDA2Q53GA4 152 aa6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 ZNF57Q68EA5 555 aaPredicted RBP6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 LIN54Q6MZP7 749 aa6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 IDO2Q6ZQW0 420 aa6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 SPAG16Q8N0X2 631 aa6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 TEX45Q8NA69 505 aa6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 OR51H1Q8NH63 302 aa6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 MARCH1Q8TCQ1 289 aa6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 C7orf50Q9BRJ6 194 aaKnown RBP6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 AIFM2Q9BRQ8 373 aa6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 PLEKHA2Q9HB19 425 aa6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 MCUBQ9NWR8 336 aa6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 METTL1Q9UBP6 276 aaKnown RBP6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 ZNF580Q9UK33 172 aa6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 GPR132Q9UNW8 380 aa6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 LSM4Q9Y4Z0 139 aaKnown RBP6.81□□□□□ -1.32
CLSTN3-212ENST00000541770 TENM3Q9P273 2699 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 IGHV7-81A0A0B4J1V7 117 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 LCE6AA0A183 80 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 CENPXA8MT69 81 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 SLC25A17O43808 307 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 B3GALNT1O75752 331 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 LY86O95711 162 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 HRASP01112 189 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 LYL1P12980 280 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 PIGPP57054 158 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 TAS2R31P59538 309 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 PLGLAQ15195 96 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 POU2AF1Q16633 256 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 OR2B11Q5JQS5 317 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 ZFAND6Q6FIF0 208 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 ZNF562Q6V9R5 426 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 SLC35E3Q7Z769 313 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 TBC1D26Q86UD7 250 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 PPP1R27Q86WC6 154 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 FOXRED2Q8IWF2 684 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 CADM3Q8N126 398 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 CCDC71LQ8N9Z2 235 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 VSTM2AQ8TAG5 236 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 CHPT1Q8WUD6 406 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 SLC25A21Q9BQT8 299 aaPredicted RBP6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 RTBDNQ9BSG5 229 aaPredicted RBP6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 FBXL15Q9H469 300 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 C5orf66Q9H5L9 145 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 BIRC6Q9NR09 4857 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 COMMD9Q9P000 198 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 COPZ2Q9P299 210 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 LINC00527Q9UJ94 153 aa6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 C14orf166Q9Y224 244 aaKnown RBP6.8□□□□□ -1.32
CLSTN3-212ENST00000541770 AP4M1O00189 453 aa6.79□□□□□ -1.32
CLSTN3-212ENST00000541770 FCN1O00602 326 aa6.79□□□□□ -1.32
CLSTN3-212ENST00000541770 CREBL2O60519 120 aaPredicted RBP6.79□□□□□ -1.32
CLSTN3-212ENST00000541770 IGF1P05019 195 aa6.79□□□□□ -1.32
CLSTN3-212ENST00000541770 FGF2P09038 288 aa6.79□□□□□ -1.32
CLSTN3-212ENST00000541770 SAA1P0DJI8 122 aaPredicted RBP6.79□□□□□ -1.32
CLSTN3-212ENST00000541770 RPA2P15927 270 aa6.79□□□□□ -1.32
CLSTN3-212ENST00000541770 NQO2P16083 231 aa6.79□□□□□ -1.32
CLSTN3-212ENST00000541770 PI3P19957 117 aa6.79□□□□□ -1.32
CLSTN3-212ENST00000541770 CRIP2P52943 208 aaPredicted RBP6.79□□□□□ -1.32
CLSTN3-212ENST00000541770 CX3CL1P78423 397 aa6.79□□□□□ -1.32
CLSTN3-212ENST00000541770 ZNF585BQ52M93 769 aa6.79□□□□□ -1.32
CLSTN3-212ENST00000541770 PUSL1Q8N0Z8 303 aaKnown RBP6.79□□□□□ -1.32
CLSTN3-212ENST00000541770 RHOVQ96L33 236 aa6.79□□□□□ -1.32
CLSTN3-212ENST00000541770 NOL4LQ96MY1 436 aaPredicted RBP6.79□□□□□ -1.32
CLSTN3-212ENST00000541770 RCHY1Q96PM5 261 aa6.79□□□□□ -1.32
CLSTN3-212ENST00000541770 HSPB9Q9BQS6 159 aa6.79□□□□□ -1.32
CLSTN3-212ENST00000541770 OR51J1Q9H342 316 aa6.79□□□□□ -1.32
CLSTN3-212ENST00000541770 BET1LQ9NYM9 111 aa6.79□□□□□ -1.32
CLSTN3-212ENST00000541770 VSIG4Q9Y279 399 aa6.79□□□□□ -1.32
CLSTN3-212ENST00000541770 EPPK1P58107 5090 aaKnown RBP6.78□□□□□ -1.32
CLSTN3-212ENST00000541770 C3orf85A0A1B0GTC6 90 aa6.78□□□□□ -1.32
CLSTN3-212ENST00000541770 CRYM-AS1A6NIL9 109 aa6.78□□□□□ -1.32
CLSTN3-212ENST00000541770 LINC01548A6NM66 108 aa6.78□□□□□ -1.32
CLSTN3-212ENST00000541770 H0Y980 276 aa6.78□□□□□ -1.32
CLSTN3-212ENST00000541770 PLA2G10O15496 165 aa6.78□□□□□ -1.32
CLSTN3-212ENST00000541770 LYRM1O43325 122 aa6.78□□□□□ -1.32
CLSTN3-212ENST00000541770 UPK1BO75841 260 aa6.78□□□□□ -1.32
CLSTN3-212ENST00000541770 KBTBD11O94819 623 aa6.78□□□□□ -1.32
CLSTN3-212ENST00000541770 OR2A4O95047 310 aa6.78□□□□□ -1.32
CLSTN3-212ENST00000541770 S1PR2O95136 353 aa6.78□□□□□ -1.32
CLSTN3-212ENST00000541770 IL6RP08887 468 aaPredicted RBP6.78□□□□□ -1.32
CLSTN3-212ENST00000541770 BTCP35070 178 aa6.78□□□□□ -1.32
CLSTN3-212ENST00000541770 RBMS2Q15434 407 aaKnown RBP6.78□□□□□ -1.32
CLSTN3-212ENST00000541770 PRSS8Q16651 343 aa6.78□□□□□ -1.32
CLSTN3-212ENST00000541770 MRGPRG-AS1Q2M3A8 158 aa6.78□□□□□ -1.32
CLSTN3-212ENST00000541770 C9orf66Q5T8R8 295 aa6.78□□□□□ -1.32
CLSTN3-212ENST00000541770 ZNF695Q8IW36 515 aa6.78□□□□□ -1.32
CLSTN3-212ENST00000541770 MMD2Q8IY49 270 aa6.78□□□□□ -1.32
CLSTN3-212ENST00000541770 STPG2Q8N412 459 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms