RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 RANGRFQ9HD47 186 aaPredicted RBP5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 MMP24Q9Y5R2 645 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 TLN2Q9Y4G6 2542 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 ABCA2Q9BZC7 2435 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 A0A1B0GU03 582 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 MARCH11A6NNE9 402 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 MPTX1A8MV57 137 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 CD5LO43866 347 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 SNAPC5O75971 98 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 SCGB1D2O95969 90 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 IGKV1-39P01597 117 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 IGKV1-16P04430 117 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 IGKV1D-39P04432 117 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 HNRNPCP07910 306 aaKnown RBP eCLIP5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 GIPP09681 153 aaPredicted RBP5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 IGHV4-38-2P0DP08 117 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 NQO2P16083 231 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 HLA-GP17693 338 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 PAX6P26367 422 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 H2BFSP57053 126 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 BRWD1-AS2P59051 145 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 S100A10P60903 97 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 RAP2BP61225 183 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 LRRC37A5PQ49AS3 106 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 LDLRAD2Q5SZI1 272 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 RUSC1-AS1Q66K80 236 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 CLEC9AQ6UXN8 241 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 PDPNQ86YL7 162 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 FAM219AQ8IW50 185 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 FOXRED2Q8IWF2 684 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 VKORC1L1Q8N0U8 176 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 TEX29Q8N6K0 151 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 OR4C13Q8NGP0 309 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 OR2T35Q8NGX2 323 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 OR4A16Q8NH70 328 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 OSR1Q8TAX0 266 aaPredicted RBP5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 NANPQ8TBE9 248 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 C17orf50Q8WW18 174 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 ASB13Q8WXK3 278 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 LSM10Q969L4 123 aaKnown RBP5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 GPR146Q96CH1 333 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 ST6GAL2Q96JF0 529 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 OR10C1Q96KK4 312 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 C20orf173Q96LM9 149 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 HARBI1Q96MB7 349 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 FYTTD1Q96QD9 318 aaKnown RBP5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 NEURL2Q9BR09 285 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 YAE1D1Q9NRH1 226 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 SVEP1Q4LDE5 3571 aa5.35□□□□□ -1.55
CLTCL1-206ENST00000540896 CSPG4Q6UVK1 2322 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 A0A0U1RQK1 487 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 A0A1W2PPI3 338 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 SMLR1H3BR10 107 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 WRBO00258 174 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 OR2A4O95047 310 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 NXPH3O95157 252 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 IGKV1D-33P01593 117 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 IGKV1-33P01594 117 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 IGKV1-5P01602 117 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 RLN2P04090 185 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 FAM106CPP0CH98 169 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 CD24P25063 80 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 CD1BP29016 333 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 SRP14P37108 136 aaKnown RBP5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 LGALS7P47929 136 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 BPIFB3P59826 476 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 KRTAP1-1Q07627 177 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 FGL1Q08830 312 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 SMCO1Q147U7 214 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 PLGLAQ15195 96 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 IZUMO4Q1ZYL8 232 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 VMA21Q3ZAQ7 101 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 ZFP69Q49AA0 526 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 TMEM177Q53S58 311 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 NMSQ5H8A3 153 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 Q71RC1 249 aaPredicted RBP5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 ZBTB8BQ8NAP8 495 aaPredicted RBP5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 OR2T10Q8NGZ9 312 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 THAP6Q8TBB0 222 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 RBMXL1Q96E39 390 aaKnown RBP5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 OR2A7Q96R45 310 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 TSNAXQ99598 290 aaKnown RBP5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 KRTAP4-5Q9BYR2 181 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 NMES1Q9C002 83 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 ZFP57Q9NU63 452 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 TMEM140Q9NV12 185 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 CACNG5Q9UF02 275 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 NUP50Q9UKX7 468 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 LSM5Q9Y4Y9 91 aaKnown RBP5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 ZFHX3Q15911 3703 aa5.34□□□□□ -1.55
CLTCL1-206ENST00000540896 ABCA1O95477 2261 aa5.34□□□□□ -1.56
CLTCL1-206ENST00000540896 ARHGAP32A7KAX9 2087 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 DSCAML1Q8TD84 2053 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 A0A0G2JRQ6 117 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 NCBP2LA6PVI3 153 aaKnown RBP5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 ST8SIA3O43173 380 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 VENTXO95231 258 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 MOSP00540 346 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms