RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 C11orf44Q8N8P7 122 aa12.2□□□□□ -0.46
DDB1-218ENST00000540784 ARPC1AQ92747 370 aa12.2□□□□□ -0.46
DDB1-218ENST00000540784 TP53RKQ96S44 253 aa12.2□□□□□ -0.46
DDB1-218ENST00000540784 CITED1Q99966 193 aa12.2□□□□□ -0.46
DDB1-218ENST00000540784 NAA60Q9H7X0 242 aa12.2□□□□□ -0.46
DDB1-218ENST00000540784 ZNF430Q9H8G1 570 aaPredicted RBP12.2□□□□□ -0.46
DDB1-218ENST00000540784 BET1LQ9NYM9 111 aa12.2□□□□□ -0.46
DDB1-218ENST00000540784 ZNF580Q9UK33 172 aa12.2□□□□□ -0.46
DDB1-218ENST00000540784 TRAV41A0A0B4J266 112 aa12.19□□□□□ -0.46
DDB1-218ENST00000540784 CRYM-AS1A6NIL9 109 aa12.19□□□□□ -0.46
DDB1-218ENST00000540784 ARPC1BO15143 372 aaKnown RBP12.19□□□□□ -0.46
DDB1-218ENST00000540784 LYRM1O43325 122 aa12.19□□□□□ -0.46
DDB1-218ENST00000540784 FBXO24O75426 580 aa12.19□□□□□ -0.46
DDB1-218ENST00000540784 CD28P10747 220 aa12.19□□□□□ -0.46
DDB1-218ENST00000540784 EGR2P11161 476 aaPredicted RBP12.19□□□□□ -0.46
DDB1-218ENST00000540784 G6PCP35575 357 aa12.19□□□□□ -0.46
DDB1-218ENST00000540784 DHODHQ02127 395 aa12.19□□□□□ -0.46
DDB1-218ENST00000540784 RBMS2Q15434 407 aaKnown RBP12.19□□□□□ -0.46
DDB1-218ENST00000540784 TNXAQ16473 311 aa12.19□□□□□ -0.46
DDB1-218ENST00000540784 TRIM16LQ309B1 348 aa12.19□□□□□ -0.46
DDB1-218ENST00000540784 TMED4Q7Z7H5 227 aa12.19□□□□□ -0.46
DDB1-218ENST00000540784 OR4X2Q8NGF9 303 aa12.19□□□□□ -0.46
DDB1-218ENST00000540784 SGMS2Q8NHU3 365 aa12.19□□□□□ -0.46
DDB1-218ENST00000540784 GRPEL2Q8TAA5 225 aa12.19□□□□□ -0.46
DDB1-218ENST00000540784 WIPF2Q8TF74 440 aaPredicted RBP12.19□□□□□ -0.46
DDB1-218ENST00000540784 TMEM140Q9NV12 185 aa12.19□□□□□ -0.46
DDB1-218ENST00000540784 NUBP2Q9Y5Y2 271 aa12.19□□□□□ -0.46
DDB1-218ENST00000540784 MSGN1A6NI15 193 aa12.18□□□□□ -0.46
DDB1-218ENST00000540784 MARCH11A6NNE9 402 aa12.18□□□□□ -0.46
DDB1-218ENST00000540784 G3V318 75 aa12.18□□□□□ -0.46
DDB1-218ENST00000540784 UPK2O00526 184 aa12.18□□□□□ -0.46
DDB1-218ENST00000540784 UPK1BO75841 260 aa12.18□□□□□ -0.46
DDB1-218ENST00000540784 ATG12O94817 140 aa12.18□□□□□ -0.46
DDB1-218ENST00000540784 NDUFB6O95139 128 aa12.18□□□□□ -0.46
DDB1-218ENST00000540784 IL6RP08887 468 aaPredicted RBP12.18□□□□□ -0.46
DDB1-218ENST00000540784 OR5AC1P0C628 307 aa12.18□□□□□ -0.46
DDB1-218ENST00000540784 MAS1LP35410 378 aa12.18□□□□□ -0.46
DDB1-218ENST00000540784 NDPQ00604 133 aa12.18□□□□□ -0.46
DDB1-218ENST00000540784 AKIRIN2Q53H80 203 aa12.18□□□□□ -0.46
DDB1-218ENST00000540784 TEX38Q6PEX7 206 aa12.18□□□□□ -0.46
DDB1-218ENST00000540784 C10orf99Q6UWK7 81 aa12.18□□□□□ -0.46
DDB1-218ENST00000540784 CADM3Q8N126 398 aa12.18□□□□□ -0.46
DDB1-218ENST00000540784 COMMD1Q8N668 190 aa12.18□□□□□ -0.46
DDB1-218ENST00000540784 LFNGQ8NES3 379 aa12.18□□□□□ -0.46
DDB1-218ENST00000540784 FAM103A1Q9BTL3 118 aaKnown RBP12.18□□□□□ -0.46
DDB1-218ENST00000540784 FBXO7Q9Y3I1 522 aa12.18□□□□□ -0.46
DDB1-218ENST00000540784 SNAPC5O75971 98 aa12.17□□□□□ -0.46
DDB1-218ENST00000540784 IGKV1-39P01597 117 aa12.17□□□□□ -0.46
DDB1-218ENST00000540784 IGKV1D-39P04432 117 aa12.17□□□□□ -0.46
DDB1-218ENST00000540784 HLA-GP17693 338 aa12.17□□□□□ -0.46
DDB1-218ENST00000540784 UCP1P25874 307 aa12.17□□□□□ -0.46
DDB1-218ENST00000540784 RPL8P62917 257 aaKnown RBP12.17□□□□□ -0.46
DDB1-218ENST00000540784 SSBP2P81877 361 aaPredicted RBP12.17□□□□□ -0.46
DDB1-218ENST00000540784 ECSCRQ19T08 205 aa12.17□□□□□ -0.46
DDB1-218ENST00000540784 TMEM128Q5BJH2 165 aa12.17□□□□□ -0.46
DDB1-218ENST00000540784 MZT2BQ6NZ67 158 aa12.17□□□□□ -0.46
DDB1-218ENST00000540784 UNQ5815/PRO19632Q6UWF5 114 aa12.17□□□□□ -0.46
DDB1-218ENST00000540784 H2BFWTQ7Z2G1 175 aa12.17□□□□□ -0.46
DDB1-218ENST00000540784 GLYATL2Q8WU03 294 aa12.17□□□□□ -0.46
DDB1-218ENST00000540784 TMEM230Q96A57 120 aa12.17□□□□□ -0.46
DDB1-218ENST00000540784 PHB2Q99623 299 aa12.17□□□□□ -0.46
DDB1-218ENST00000540784 TMEM222Q9H0R3 208 aa12.17□□□□□ -0.46
DDB1-218ENST00000540784 TENM1Q9UKZ4 2725 aa12.16□□□□□ -0.46
DDB1-218ENST00000540784 TRAV3A0A0B4J244 114 aa12.16□□□□□ -0.46
DDB1-218ENST00000540784 TCRBV4S1A1TA0A5B7 111 aa12.16□□□□□ -0.46
DDB1-218ENST00000540784 CDS2O95674 445 aa12.16□□□□□ -0.46
DDB1-218ENST00000540784 ANXA3P12429 323 aa12.16□□□□□ -0.46
DDB1-218ENST00000540784 PPIFP30405 207 aaKnown RBP12.16□□□□□ -0.46
DDB1-218ENST00000540784 BTCP35070 178 aa12.16□□□□□ -0.46
DDB1-218ENST00000540784 CRIP2P52943 208 aaPredicted RBP12.16□□□□□ -0.46
DDB1-218ENST00000540784 CD83Q01151 205 aa12.16□□□□□ -0.46
DDB1-218ENST00000540784 ZNF695Q8IW36 515 aa12.16□□□□□ -0.46
DDB1-218ENST00000540784 CENPSQ8N2Z9 138 aa12.16□□□□□ -0.46
DDB1-218ENST00000540784 MINDY2Q8NBR6 621 aa12.16□□□□□ -0.46
DDB1-218ENST00000540784 SRSF12Q8WXF0 261 aaKnown RBP12.16□□□□□ -0.46
DDB1-218ENST00000540784 GALNT14Q96FL9 552 aa12.16□□□□□ -0.46
DDB1-218ENST00000540784 SEC22AQ96IW7 307 aa12.16□□□□□ -0.46
DDB1-218ENST00000540784 TMEM68Q96MH6 324 aa12.16□□□□□ -0.46
DDB1-218ENST00000540784 SPIN2AQ99865 258 aa12.16□□□□□ -0.46
DDB1-218ENST00000540784 CITED2Q99967 270 aaPredicted RBP12.16□□□□□ -0.46
DDB1-218ENST00000540784 SPIN2BQ9BPZ2 258 aa12.16□□□□□ -0.46
DDB1-218ENST00000540784 IGHG4P01861 327 aa12.15□□□□□ -0.46
DDB1-218ENST00000540784 OPN1MWP04001 364 aa12.15□□□□□ -0.46
DDB1-218ENST00000540784 ELANEP08246 267 aa12.15□□□□□ -0.46
DDB1-218ENST00000540784 OPN1MW2P0DN77 364 aa12.15□□□□□ -0.46
DDB1-218ENST00000540784 OPN1MW3P0DN78 364 aa12.15□□□□□ -0.46
DDB1-218ENST00000540784 RPL27AP46776 148 aaKnown RBP12.15□□□□□ -0.46
DDB1-218ENST00000540784 CFHR3Q02985 330 aa12.15□□□□□ -0.46
DDB1-218ENST00000540784 FOXE3Q13461 319 aa12.15□□□□□ -0.46
DDB1-218ENST00000540784 ASAH1Q13510 395 aa12.15□□□□□ -0.46
DDB1-218ENST00000540784 TCTEX1D4Q5JR98 221 aa12.15□□□□□ -0.46
DDB1-218ENST00000540784 HIST2H2BDQ6DRA6 164 aa12.15□□□□□ -0.46
DDB1-218ENST00000540784 TMEM65Q6PI78 240 aa12.15□□□□□ -0.46
DDB1-218ENST00000540784 SLC25A42Q86VD7 318 aa12.15□□□□□ -0.46
DDB1-218ENST00000540784 SELENOHQ8IZQ5 122 aaKnown RBP12.15□□□□□ -0.46
DDB1-218ENST00000540784 OR5T1Q8NG75 326 aa12.15□□□□□ -0.46
DDB1-218ENST00000540784 OR4A16Q8NH70 328 aa12.15□□□□□ -0.46
DDB1-218ENST00000540784 RRNAD1Q96FB5 475 aaKnown RBP12.15□□□□□ -0.46
DDB1-218ENST00000540784 FYTTD1Q96QD9 318 aaKnown RBP12.15□□□□□ -0.46
DDB1-218ENST00000540784 TSC22D3Q99576 134 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms