RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 OOSP1A8MZH6 123 aa8.5□□□□□ -1.05
ATL3-204ENST00000540699 H0YJW9 148 aa8.5□□□□□ -1.05
ATL3-204ENST00000540699 K7EPK0 472 aa8.5□□□□□ -1.05
ATL3-204ENST00000540699 TOR1AO14656 332 aa8.5□□□□□ -1.05
ATL3-204ENST00000540699 HOXA3O43365 443 aaPredicted RBP8.5□□□□□ -1.05
ATL3-204ENST00000540699 DEDDO75618 318 aa8.5□□□□□ -1.05
ATL3-204ENST00000540699 RNASE1P07998 156 aaKnown RBP8.5□□□□□ -1.05
ATL3-204ENST00000540699 IL3RAP26951 378 aa8.5□□□□□ -1.05
ATL3-204ENST00000540699 DYNLT3P51808 116 aa8.5□□□□□ -1.05
ATL3-204ENST00000540699 AKR1C2P52895 323 aa8.5□□□□□ -1.05
ATL3-204ENST00000540699 UBA52P62987 128 aaKnown RBP8.5□□□□□ -1.05
ATL3-204ENST00000540699 ID3Q02535 119 aa8.5□□□□□ -1.05
ATL3-204ENST00000540699 SMCO1Q147U7 214 aa8.5□□□□□ -1.05
ATL3-204ENST00000540699 POU2AF1Q16633 256 aa8.5□□□□□ -1.05
ATL3-204ENST00000540699 FAM71E2Q8N5Q1 922 aa8.5□□□□□ -1.05
ATL3-204ENST00000540699 OR5AN1Q8NGI8 311 aa8.5□□□□□ -1.05
ATL3-204ENST00000540699 OR4S2Q8NH73 311 aa8.5□□□□□ -1.05
ATL3-204ENST00000540699 OR1S1Q8NH92 325 aa8.5□□□□□ -1.05
ATL3-204ENST00000540699 COA4Q9NYJ1 87 aa8.5□□□□□ -1.05
ATL3-204ENST00000540699 OR5AC2Q9NZP5 309 aa8.5□□□□□ -1.05
ATL3-204ENST00000540699 RCL1Q9Y2P8 373 aaKnown RBP8.5□□□□□ -1.05
ATL3-204ENST00000540699 AMMECR1Q9Y4X0 333 aaPredicted RBP8.5□□□□□ -1.05
ATL3-204ENST00000540699 HSPB11Q9Y547 144 aa8.5□□□□□ -1.05
ATL3-204ENST00000540699 LEUTXA8MZ59 168 aa8.49□□□□□ -1.05
ATL3-204ENST00000540699 ARPC5O15511 151 aa8.49□□□□□ -1.05
ATL3-204ENST00000540699 WIPF1O43516 503 aa8.49□□□□□ -1.05
ATL3-204ENST00000540699 SNAPC5O75971 98 aa8.49□□□□□ -1.05
ATL3-204ENST00000540699 ATG12O94817 140 aa8.49□□□□□ -1.05
ATL3-204ENST00000540699 PET100P0DJ07 73 aa8.49□□□□□ -1.05
ATL3-204ENST00000540699 G6PCP35575 357 aa8.49□□□□□ -1.05
ATL3-204ENST00000540699 CEACAM3P40198 252 aa8.49□□□□□ -1.05
ATL3-204ENST00000540699 TAGLNQ01995 201 aaKnown RBP8.49□□□□□ -1.05
ATL3-204ENST00000540699 IZUMO4Q1ZYL8 232 aa8.49□□□□□ -1.05
ATL3-204ENST00000540699 LRRC75BQ2VPJ9 315 aa8.49□□□□□ -1.05
ATL3-204ENST00000540699 AARDQ4LEZ3 155 aa8.49□□□□□ -1.05
ATL3-204ENST00000540699 TPTE2P1Q5T6R2 138 aa8.49□□□□□ -1.05
ATL3-204ENST00000540699 THOC7Q6I9Y2 204 aaKnown RBP8.49□□□□□ -1.05
ATL3-204ENST00000540699 DHRS7BQ6IAN0 325 aaPredicted RBP8.49□□□□□ -1.05
ATL3-204ENST00000540699 DMBX1Q8NFW5 382 aa8.49□□□□□ -1.05
ATL3-204ENST00000540699 OR5R1Q8NH85 324 aa8.49□□□□□ -1.05
ATL3-204ENST00000540699 THAP6Q8TBB0 222 aa8.49□□□□□ -1.05
ATL3-204ENST00000540699 PIFOQ8TCI5 191 aa8.49□□□□□ -1.05
ATL3-204ENST00000540699 R3HDM4Q96D70 268 aa8.49□□□□□ -1.05
ATL3-204ENST00000540699 RRNAD1Q96FB5 475 aaKnown RBP8.49□□□□□ -1.05
ATL3-204ENST00000540699 SLC35D1Q9NTN3 355 aa8.49□□□□□ -1.05
ATL3-204ENST00000540699 ZFP57Q9NU63 452 aa8.49□□□□□ -1.05
ATL3-204ENST00000540699 CACNG5Q9UF02 275 aa8.49□□□□□ -1.05
ATL3-204ENST00000540699 PKD1L1Q8TDX9 2849 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 MARCH11A6NNE9 402 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 FAM90A9PA6NNJ1 464 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 TRIM77I1YAP6 450 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 ST8SIA3O43173 380 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 CRYZL1O95825 349 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 KRASP01116 189 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 IGHV4-59P01825 116 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 IL6RP08887 468 aaPredicted RBP8.48□□□□□ -1.05
ATL3-204ENST00000540699 OR9G9P0C7N8 305 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 RRASP10301 218 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 NQO2P16083 231 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 PAX6P26367 422 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 NKX2-1P43699 371 aaPredicted RBP8.48□□□□□ -1.05
ATL3-204ENST00000540699 REG1BP48304 166 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 ARHGDIBP52566 201 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 S100A10P60903 97 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 IFITM2Q01629 132 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 ZNF345Q14585 488 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 SSX2Q16385 188 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 CXorf66Q5JRM2 361 aaPredicted RBP8.48□□□□□ -1.05
ATL3-204ENST00000540699 ZNF546Q86UE3 836 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 TGIF2LXQ8IUE1 241 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 RNASE11Q8TAA1 199 aaKnown RBP8.48□□□□□ -1.05
ATL3-204ENST00000540699 SSX3Q99909 188 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 MFFQ9GZY8 342 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 LSM5Q9Y4Y9 91 aaKnown RBP8.48□□□□□ -1.05
ATL3-204ENST00000540699 MEGF8Q7Z7M0 2845 aa8.48□□□□□ -1.05
ATL3-204ENST00000540699 A0A1W2PPI3 338 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 MSGN1A6NI15 193 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 FAM90A26D6RGX4 464 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 L7N2F9 121 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 TXNL1O43396 289 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 OR2F2O95006 317 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 SCGB1D2O95969 90 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 APOA2P02652 100 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 IGKV1-16P04430 117 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 RPL15P61313 204 aaKnown RBP8.47□□□□□ -1.05
ATL3-204ENST00000540699 POLR2GP62487 172 aaKnown RBP eCLIP8.47□□□□□ -1.05
ATL3-204ENST00000540699 OR2F1Q13607 317 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 HABP2Q14520 560 aaPredicted RBP8.47□□□□□ -1.05
ATL3-204ENST00000540699 RTL8BQ17RB0 113 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 TMEM177Q53S58 311 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 CCDC144NLQ6NUI1 221 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 ACOT7LQ6ZUV0 252 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 PDPNQ86YL7 162 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 OR8H3Q8N146 312 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 KCNRGQ8N5I3 272 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.47□□□□□ -1.05
ATL3-204ENST00000540699 DCUN1D4Q92564 292 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 RBMXL1Q96E39 390 aaKnown RBP8.47□□□□□ -1.05
ATL3-204ENST00000540699 AQP10Q96PS8 301 aa8.47□□□□□ -1.05
ATL3-204ENST00000540699 TMEM140Q9NV12 185 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms