RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 USF1P22415 310 aaPredicted RBP10.89□□□□□ -0.67
MSH6-210ENST00000540021 NPY1RP25929 384 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 LCN2P80188 198 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 RPL39P5Q59GN2 51 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 FBXW9Q5XUX1 488 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 TDHQ8IZJ6 230 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 ST6GALNAC3Q8NDV1 305 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 DAZAP1Q96EP5 407 aaKnown RBP10.89□□□□□ -0.67
MSH6-210ENST00000540021 AP1S3Q96PC3 154 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 RNF24Q9Y225 148 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 APOA2P02652 100 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 CD82P27701 267 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 UBE2G1P62253 170 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 PAFAH1B2P68402 229 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 ZNF718Q3SXZ3 478 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 TEPPQ6URK8 271 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 MS4A5Q9H3V2 200 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 KLF13Q9Y2Y9 288 aaPredicted RBP10.89□□□□□ -0.67
MSH6-210ENST00000540021 TIMM9Q9Y5J7 89 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 CGAP01215 116 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 GATA2P23769 480 aaPredicted RBP10.89□□□□□ -0.67
MSH6-210ENST00000540021 MAS1LP35410 378 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 ACTL10Q5JWF8 245 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 ABLIM2Q6H8Q1 611 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 KLHDC1Q8N7A1 406 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 VPS25Q9BRG1 176 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 PKIBQ9C010 78 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 PPIAL4AQ9Y536 164 aa10.89□□□□□ -0.67
MSH6-210ENST00000540021 WNK2Q9Y3S1 2297 aa10.88□□□□□ -0.67
MSH6-210ENST00000540021 ENSAO43768 121 aaKnown RBP10.88□□□□□ -0.67
MSH6-210ENST00000540021 PSPNO60542 156 aa10.88□□□□□ -0.67
MSH6-210ENST00000540021 SLC24A4Q8NFF2 622 aa10.88□□□□□ -0.67
MSH6-210ENST00000540021 OR4C5Q8NGB2 326 aa10.88□□□□□ -0.67
MSH6-210ENST00000540021 BLNKQ8WV28 456 aa10.88□□□□□ -0.67
MSH6-210ENST00000540021 POLR3KQ9Y2Y1 108 aaPredicted RBP10.88□□□□□ -0.67
MSH6-210ENST00000540021 CACNA1HO95180 2353 aa10.88□□□□□ -0.67
MSH6-210ENST00000540021 ZNF503-AS2A6NEH8 195 aa10.88□□□□□ -0.67
MSH6-210ENST00000540021 TAS2R45P59539 299 aa10.88□□□□□ -0.67
MSH6-210ENST00000540021 TBL2Q9Y4P3 447 aaKnown RBP10.88□□□□□ -0.67
MSH6-210ENST00000540021 M0R2Z0 102 aa10.88□□□□□ -0.67
MSH6-210ENST00000540021 RAB29O14966 203 aa10.88□□□□□ -0.67
MSH6-210ENST00000540021 RAB7AP51149 207 aa10.88□□□□□ -0.67
MSH6-210ENST00000540021 MFAP2P55001 183 aa10.88□□□□□ -0.67
MSH6-210ENST00000540021 UBE2L3P68036 154 aaKnown RBP10.88□□□□□ -0.67
MSH6-210ENST00000540021 ODF3L1Q8IXM7 274 aa10.88□□□□□ -0.67
MSH6-210ENST00000540021 OR13A1Q8NGR1 328 aa10.88□□□□□ -0.67
MSH6-210ENST00000540021 FAM122AQ96E09 287 aa10.88□□□□□ -0.67
MSH6-210ENST00000540021 RNASE7Q9H1E1 156 aaKnown RBP10.88□□□□□ -0.67
MSH6-210ENST00000540021 NPVFQ9HCQ7 196 aa10.88□□□□□ -0.67
MSH6-210ENST00000540021 SPTBN1Q01082 2364 aaKnown RBP10.87□□□□□ -0.67
MSH6-210ENST00000540021 CFAP54Q96N23 3096 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 PLAUP00749 431 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 CHRNB4P30926 498 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 TMEM14EPQ6UXP3 125 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 TCTEX1D1Q8N7M0 179 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 ZNF114Q8NC26 417 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 ZBTB34Q8NCN2 500 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 RND1Q92730 232 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 FGF23Q9GZV9 251 aaPredicted RBP10.87□□□□□ -0.67
MSH6-210ENST00000540021 SLC45A2Q9UMX9 530 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 LOC102723996A0A087X1L8 192 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 MKRN2OSH3BPM6 223 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 SOX8P57073 446 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 B3GALT5-AS1P59052 145 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 STUMQ69YW2 141 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 COMMD5Q9GZQ3 224 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 DNAJC4Q9NNZ3 241 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 WIPI2Q9Y4P8 454 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 GCHFRP30047 84 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 MMDQ15546 238 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 CENPWQ5EE01 88 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 C1orf194Q5T5A4 169 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 ZNF497Q6ZNH5 498 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 BEND2Q8NDZ0 799 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 OR2D3Q8NGH3 330 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 SLC35E1Q96K37 410 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 HSPB7Q9UBY9 170 aa10.87□□□□□ -0.67
MSH6-210ENST00000540021 RIF1Q5UIP0 2472 aaKnown RBP10.86□□□□□ -0.67
MSH6-210ENST00000540021 APELAP0DMC3 54 aa10.86□□□□□ -0.67
MSH6-210ENST00000540021 STPG3Q8N7X2 389 aa10.86□□□□□ -0.67
MSH6-210ENST00000540021 H1FXQ92522 213 aaKnown RBP10.86□□□□□ -0.67
MSH6-210ENST00000540021 SPSB4Q96A44 273 aa10.86□□□□□ -0.67
MSH6-210ENST00000540021 YPEL4Q96NS1 127 aa10.86□□□□□ -0.67
MSH6-210ENST00000540021 TMEM208Q9BTX3 173 aa10.86□□□□□ -0.67
MSH6-210ENST00000540021 TMEM140Q9NV12 185 aa10.86□□□□□ -0.67
MSH6-210ENST00000540021 TECRQ9NZ01 308 aaKnown RBP10.86□□□□□ -0.67
MSH6-210ENST00000540021 COX7A2P2O60397 106 aa10.86□□□□□ -0.67
MSH6-210ENST00000540021 CA1P00915 261 aaPredicted RBP10.86□□□□□ -0.67
MSH6-210ENST00000540021 CSN3P07498 182 aa10.86□□□□□ -0.67
MSH6-210ENST00000540021 CDKN1AP38936 164 aa10.86□□□□□ -0.67
MSH6-210ENST00000540021 SPATA31B1PQ5VZV4 182 aa10.86□□□□□ -0.67
MSH6-210ENST00000540021 CORO2AQ92828 525 aa10.86□□□□□ -0.67
MSH6-210ENST00000540021 PTPRSQ13332 1948 aa10.85□□□□□ -0.67
MSH6-210ENST00000540021 MED12LQ86YW9 2145 aa10.85□□□□□ -0.67
MSH6-210ENST00000540021 NUPR1O60356 82 aa10.85□□□□□ -0.67
MSH6-210ENST00000540021 NPSP0C0P6 89 aa10.85□□□□□ -0.67
MSH6-210ENST00000540021 OR9G9P0C7N8 305 aa10.85□□□□□ -0.67
MSH6-210ENST00000540021 ZNF83P51522 516 aa10.85□□□□□ -0.67
MSH6-210ENST00000540021 TCTAP57738 103 aa10.85□□□□□ -0.67
MSH6-210ENST00000540021 KLF14Q8TD94 323 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms