RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 ATG2BQ96BY7 2078 aa1.75□□□□□ -2.13
SNHG1-210ENST00000539303 ANKRD30AQ9BXX3 1397 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 PBRM1Q86U86 1689 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 CACNA1SQ13698 1873 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 TRBV20OR9-2A0A075B6H5 130 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 hCG_1818297A0A087WSY0 165 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 A0A0J9YY10 115 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 A0A1B0GV72 72 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 TMEM269A0A1B0GVZ9 245 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 A0A1B0GX78 115 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 A0A1W2PQ67 120 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 A8MT66 165 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 I3L521 148 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 PIRO00625 290 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 HMGB3O15347 200 aaKnown RBP1.74□□□□□ -2.13
SNHG1-210ENST00000539303 SERPINE1P05121 402 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 NPPCP23582 126 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 GABRA2P47869 451 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 HSPE1P61604 102 aaKnown RBP1.74□□□□□ -2.13
SNHG1-210ENST00000539303 GNG3P63215 75 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 C3orf33Q6P1S2 294 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 ZNF322Q6U7Q0 402 aaPredicted RBP1.74□□□□□ -2.13
SNHG1-210ENST00000539303 SDIM1Q6ZPB5 146 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 TMEM136Q6ZRR5 245 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 Q6ZS49 121 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 SPATA12Q7Z6I5 190 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 ZNF561Q8N587 486 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 SMIM20Q8N5G0 67 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 EIF4E3Q8N5X7 224 aaKnown RBP1.74□□□□□ -2.13
SNHG1-210ENST00000539303 GDPD1Q8N9F7 314 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 OR11H6Q8NGC7 330 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 OR13C8Q8NGS7 320 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 FNDC9Q8TBE3 224 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 TEX47Q8TBZ9 253 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 TSPAN32Q96QS1 320 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 MND1Q9BWT6 205 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 WDR61Q9GZS3 305 aaKnown RBP1.74□□□□□ -2.13
SNHG1-210ENST00000539303 BOLA2Q9H3K6 86 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 C11orf1Q9H5F2 150 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 MCTS1Q9ULC4 181 aaKnown RBP1.74□□□□□ -2.13
SNHG1-210ENST00000539303 ZNF443Q9Y2A4 671 aaPredicted RBP1.74□□□□□ -2.13
SNHG1-210ENST00000539303 DOCK6Q96HP0 2047 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 SCN10AQ9Y5Y9 1956 aa1.74□□□□□ -2.13
SNHG1-210ENST00000539303 NUP155O75694 1391 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 ROCK1Q13464 1354 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 HECW2Q9P2P5 1572 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 DOCK3Q8IZD9 2030 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 A0A087WUU8 490 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 IGHV3-73A0A0B4J1V6 119 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 GNG14A0A1W2PPG7 69 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 DHRS12A0PJE2 317 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 OR5K4A6NMS3 321 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 OR11H12B2RN74 326 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 LY6HO94772 140 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 S1PR2O95136 353 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 C8GP07360 202 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 SRP19P09132 144 aaKnown RBP1.73□□□□□ -2.13
SNHG1-210ENST00000539303 CYBAP13498 195 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 CPMP14384 443 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 ZNF14P17017 642 aaPredicted RBP1.73□□□□□ -2.13
SNHG1-210ENST00000539303 ERP29P30040 261 aaKnown RBP1.73□□□□□ -2.13
SNHG1-210ENST00000539303 S100A7P31151 101 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 FOXA1P55317 472 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 DEFA3P59666 94 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 FKBP1AP62942 108 aaKnown RBP1.73□□□□□ -2.13
SNHG1-210ENST00000539303 HBA1P69905 142 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 CST6Q15828 149 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 LGALS9BQ3B8N2 356 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 KRTAP13-2Q52LG2 175 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 DNLZQ5SXM8 178 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 LGALS9CQ6DKI2 356 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 ZFAND6Q6FIF0 208 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 NOXRED1Q6NXP6 359 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 GOLT1AQ6ZVE7 132 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 TAC4Q86UU9 113 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 RNF182Q8N6D2 247 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.73□□□□□ -2.13
SNHG1-210ENST00000539303 OR11H2Q8NH07 326 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 ZHX1-C8orf76Q96EF9 292 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 UPK3BQ9BT76 320 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 TMEM222Q9H0R3 208 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 ABCG5Q9H222 651 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 C11orf68Q9H3H3 251 aaKnown RBP1.73□□□□□ -2.13
SNHG1-210ENST00000539303 BIN3Q9NQY0 253 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 ASF1BQ9NVP2 202 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 FBXL12Q9NXK8 326 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 PYCARDQ9ULZ3 195 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 UFC1Q9Y3C8 167 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 TMEM56-RWDD3S4R434 201 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 LCTP09848 1927 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 SSH2Q76I76 1423 aa1.73□□□□□ -2.13
SNHG1-210ENST00000539303 RTL1A6NKG5 1358 aa1.72□□□□□ -2.13
SNHG1-210ENST00000539303 IGLV2-18A0A075B6J9 118 aa1.72□□□□□ -2.13
SNHG1-210ENST00000539303 TRAV9-1A0A075B6T8 112 aa1.72□□□□□ -2.13
SNHG1-210ENST00000539303 SPRR5A0A1B0GTR4 108 aa1.72□□□□□ -2.13
SNHG1-210ENST00000539303 LOC102725191A0A1B0GVB3 256 aa1.72□□□□□ -2.13
SNHG1-210ENST00000539303 A0A1B0GW54 56 aa1.72□□□□□ -2.13
SNHG1-210ENST00000539303 GRIFINA4D1Z8 144 aa1.72□□□□□ -2.13
SNHG1-210ENST00000539303 C19orf71A6NCJ1 209 aa1.72□□□□□ -2.13
SNHG1-210ENST00000539303 GGTLC3B5MD39 225 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms