RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 TMEM17Q86X19 198 aa10.61□□□□□ -0.71
CD9-208ENST00000538834 VKORC1L1Q8N0U8 176 aa10.61□□□□□ -0.71
CD9-208ENST00000538834 ADAD2Q8NCV1 583 aaKnown RBP10.61□□□□□ -0.71
CD9-208ENST00000538834 OR4D10Q8NGI6 311 aa10.61□□□□□ -0.71
CD9-208ENST00000538834 VSTM2AQ8TAG5 236 aa10.61□□□□□ -0.71
CD9-208ENST00000538834 CD300LFQ8TDQ1 290 aa10.61□□□□□ -0.71
CD9-208ENST00000538834 FCAMRQ8WWV6 532 aa10.61□□□□□ -0.71
CD9-208ENST00000538834 SRSF12Q8WXF0 261 aaKnown RBP10.61□□□□□ -0.71
CD9-208ENST00000538834 OR2A7Q96R45 310 aa10.61□□□□□ -0.71
CD9-208ENST00000538834 TRBV9A0A0B4J1U6 114 aa10.6□□□□□ -0.71
CD9-208ENST00000538834 MSGN1A6NI15 193 aa10.6□□□□□ -0.71
CD9-208ENST00000538834 M0QYG6 137 aa10.6□□□□□ -0.71
CD9-208ENST00000538834 RGS5O15539 181 aa10.6□□□□□ -0.71
CD9-208ENST00000538834 DUS4LO95620 317 aaKnown RBP10.6□□□□□ -0.71
CD9-208ENST00000538834 PF4P02776 101 aa10.6□□□□□ -0.71
CD9-208ENST00000538834 IGLL1P15814 213 aa10.6□□□□□ -0.71
CD9-208ENST00000538834 CD33P20138 364 aa10.6□□□□□ -0.71
CD9-208ENST00000538834 RND3P61587 244 aa10.6□□□□□ -0.71
CD9-208ENST00000538834 GNB1P62873 340 aa10.6□□□□□ -0.71
CD9-208ENST00000538834 DEFB136Q30KP8 78 aa10.6□□□□□ -0.71
CD9-208ENST00000538834 OR4A47Q6IF82 309 aa10.6□□□□□ -0.71
CD9-208ENST00000538834 LPCAT3Q6P1A2 487 aa10.6□□□□□ -0.71
CD9-208ENST00000538834 TMEM65Q6PI78 240 aa10.6□□□□□ -0.71
CD9-208ENST00000538834 TTC9CQ8N5M4 171 aa10.6□□□□□ -0.71
CD9-208ENST00000538834 POC5Q8NA72 575 aa10.6□□□□□ -0.71
CD9-208ENST00000538834 OR4A5Q8NH83 315 aa10.6□□□□□ -0.71
CD9-208ENST00000538834 GRPEL2Q8TAA5 225 aa10.6□□□□□ -0.71
CD9-208ENST00000538834 DGCR14Q96DF8 476 aaKnown RBP10.6□□□□□ -0.71
CD9-208ENST00000538834 DIRAS2Q96HU8 199 aa10.6□□□□□ -0.71
CD9-208ENST00000538834 COMMD9Q9P000 198 aa10.6□□□□□ -0.71
CD9-208ENST00000538834 RSL24D1Q9UHA3 163 aaKnown RBP10.6□□□□□ -0.71
CD9-208ENST00000538834 CREBL2O60519 120 aaPredicted RBP10.59□□□□□ -0.71
CD9-208ENST00000538834 CNIH1O95406 144 aa10.59□□□□□ -0.71
CD9-208ENST00000538834 LGALS1P09382 135 aaKnown RBP10.59□□□□□ -0.71
CD9-208ENST00000538834 NQO2P16083 231 aa10.59□□□□□ -0.71
CD9-208ENST00000538834 C10orf55Q5SWW7 151 aa10.59□□□□□ -0.71
CD9-208ENST00000538834 C1QL4Q86Z23 238 aa10.59□□□□□ -0.71
CD9-208ENST00000538834 TERB2Q8NHR7 220 aa10.59□□□□□ -0.71
CD9-208ENST00000538834 MCFD2Q8NI22 146 aa10.59□□□□□ -0.71
CD9-208ENST00000538834 CASTOR1Q8WTX7 329 aa10.59□□□□□ -0.71
CD9-208ENST00000538834 ZNF486Q96H40 463 aaPredicted RBP10.59□□□□□ -0.71
CD9-208ENST00000538834 DUX3Q96PT4 197 aa10.59□□□□□ -0.71
CD9-208ENST00000538834 AIFM2Q9BRQ8 373 aa10.59□□□□□ -0.71
CD9-208ENST00000538834 TRAV3A0A0B4J244 114 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 ANKRD20A5PA0PJZ0 165 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 NUDT19A8MXV4 375 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 UPK2O00526 184 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 S1PR2O95136 353 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 IGKV1-39P01597 117 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 IGKV1D-39P04432 117 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 RLN1P04808 185 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 CRYGCP07315 174 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 OR9G9P0C7N8 305 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 TAS2R19P59542 299 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 TSPAN5P62079 268 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 ZNF45Q02386 682 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 TNXAQ16473 311 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 PDLIM3Q53GG5 364 aaPredicted RBP10.58□□□□□ -0.72
CD9-208ENST00000538834 RNASE10Q5GAN6 216 aaKnown RBP10.58□□□□□ -0.72
CD9-208ENST00000538834 FOXB2Q5VYV0 432 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 STEAP1BQ6NZ63 245 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 CCDC190Q86UF4 302 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 CMTM1Q8IZ96 169 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 SLC38A6Q8IZM9 456 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 OR5T1Q8NG75 326 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 OR11H1Q8NG94 326 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 OR51H1Q8NH63 302 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 DCUN1D5Q9BTE7 237 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 SLC2A9Q9NRM0 540 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 V9GYH0 126 aa10.58□□□□□ -0.72
CD9-208ENST00000538834 NPIPB5A8MRT5 1133 aa10.57□□□□□ -0.72
CD9-208ENST00000538834 NOL3O60936 208 aaKnown RBP10.57□□□□□ -0.72
CD9-208ENST00000538834 ETV6P41212 452 aa10.57□□□□□ -0.72
CD9-208ENST00000538834 RPL8P62917 257 aaKnown RBP10.57□□□□□ -0.72
CD9-208ENST00000538834 ZNF616Q08AN1 781 aa10.57□□□□□ -0.72
CD9-208ENST00000538834 ZNF79Q15937 498 aa10.57□□□□□ -0.72
CD9-208ENST00000538834 ZNF343Q6P1L6 599 aa10.57□□□□□ -0.72
CD9-208ENST00000538834 OR1N2Q8NGR9 330 aa10.57□□□□□ -0.72
CD9-208ENST00000538834 ABHD5Q8WTS1 349 aa10.57□□□□□ -0.72
CD9-208ENST00000538834 SEC22AQ96IW7 307 aa10.57□□□□□ -0.72
CD9-208ENST00000538834 SPIN2AQ99865 258 aa10.57□□□□□ -0.72
CD9-208ENST00000538834 SPIN2BQ9BPZ2 258 aa10.57□□□□□ -0.72
CD9-208ENST00000538834 MCRIP2Q9BUT9 160 aaKnown RBP10.57□□□□□ -0.72
CD9-208ENST00000538834 C6orf62Q9GZU0 229 aaPredicted RBP10.57□□□□□ -0.72
CD9-208ENST00000538834 ALX4Q9H161 411 aaPredicted RBP10.57□□□□□ -0.72
CD9-208ENST00000538834 SLC2A8Q9NY64 477 aa10.57□□□□□ -0.72
CD9-208ENST00000538834 DMRT1Q9Y5R6 373 aa10.57□□□□□ -0.72
CD9-208ENST00000538834 COL7A1Q02388 2944 aa10.56□□□□□ -0.72
CD9-208ENST00000538834 RAB3DO95716 219 aa10.56□□□□□ -0.72
CD9-208ENST00000538834 TRGV3P03979 118 aa10.56□□□□□ -0.72
CD9-208ENST00000538834 P0C879 139 aa10.56□□□□□ -0.72
CD9-208ENST00000538834 CTRB1P17538 263 aa10.56□□□□□ -0.72
CD9-208ENST00000538834 HLA-GP17693 338 aa10.56□□□□□ -0.72
CD9-208ENST00000538834 LPAR6P43657 344 aa10.56□□□□□ -0.72
CD9-208ENST00000538834 RPL27AP46776 148 aaKnown RBP10.56□□□□□ -0.72
CD9-208ENST00000538834 OR2B8PP59922 312 aa10.56□□□□□ -0.72
CD9-208ENST00000538834 IL18Q14116 193 aa10.56□□□□□ -0.72
CD9-208ENST00000538834 RNASE12Q5GAN4 147 aaKnown RBP10.56□□□□□ -0.72
CD9-208ENST00000538834 CTRB2Q6GPI1 263 aa10.56□□□□□ -0.72
CD9-208ENST00000538834 TBC1D26Q86UD7 250 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms