RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 SMCO1Q147U7 214 aa11.34□□□□□ -0.59
CD4-208ENST00000538827 PLGLAQ15195 96 aa11.34□□□□□ -0.59
CD4-208ENST00000538827 MMDQ15546 238 aa11.34□□□□□ -0.59
CD4-208ENST00000538827 DEFB112Q30KQ8 113 aa11.34□□□□□ -0.59
CD4-208ENST00000538827 LRRC37A5PQ49AS3 106 aa11.34□□□□□ -0.59
CD4-208ENST00000538827 FBLN7Q53RD9 439 aa11.34□□□□□ -0.59
CD4-208ENST00000538827 OR4A47Q6IF82 309 aa11.34□□□□□ -0.59
CD4-208ENST00000538827 FOXRED2Q8IWF2 684 aa11.34□□□□□ -0.59
CD4-208ENST00000538827 ZDHHC16Q969W1 377 aa11.34□□□□□ -0.59
CD4-208ENST00000538827 EAF1Q96JC9 268 aaPredicted RBP11.34□□□□□ -0.59
CD4-208ENST00000538827 RITA1Q96K30 269 aa11.34□□□□□ -0.59
CD4-208ENST00000538827 FYTTD1Q96QD9 318 aaKnown RBP11.34□□□□□ -0.59
CD4-208ENST00000538827 AIFM2Q9BRQ8 373 aa11.34□□□□□ -0.59
CD4-208ENST00000538827 ANK2Q01484 3957 aa11.34□□□□□ -0.59
CD4-208ENST00000538827 SRRM4A7MD48 611 aaKnown RBP11.33□□□□□ -0.6
CD4-208ENST00000538827 H3BUX3 64 aa11.33□□□□□ -0.6
CD4-208ENST00000538827 SNAPC5O75971 98 aa11.33□□□□□ -0.6
CD4-208ENST00000538827 FAM106CPP0CH98 169 aa11.33□□□□□ -0.6
CD4-208ENST00000538827 LY6EQ16553 131 aa11.33□□□□□ -0.6
CD4-208ENST00000538827 OR4A16Q8NH70 328 aa11.33□□□□□ -0.6
CD4-208ENST00000538827 ST6GAL2Q96JF0 529 aa11.33□□□□□ -0.6
CD4-208ENST00000538827 SSX3Q99909 188 aa11.33□□□□□ -0.6
CD4-208ENST00000538827 TPSG1Q9NRR2 321 aa11.33□□□□□ -0.6
CD4-208ENST00000538827 KIAA1456Q9P272 454 aa11.33□□□□□ -0.6
CD4-208ENST00000538827 METTL1Q9UBP6 276 aaKnown RBP11.33□□□□□ -0.6
CD4-208ENST00000538827 LSM5Q9Y4Y9 91 aaKnown RBP11.33□□□□□ -0.6
CD4-208ENST00000538827 TRAV3A0A0B4J244 114 aa11.32□□□□□ -0.6
CD4-208ENST00000538827 A0A1B0GU03 582 aa11.32□□□□□ -0.6
CD4-208ENST00000538827 NCBP2LA6PVI3 153 aaKnown RBP11.32□□□□□ -0.6
CD4-208ENST00000538827 NBR2O15453 112 aa11.32□□□□□ -0.6
CD4-208ENST00000538827 WIPF1O43516 503 aa11.32□□□□□ -0.6
CD4-208ENST00000538827 KBTBD11O94819 623 aa11.32□□□□□ -0.6
CD4-208ENST00000538827 OR2A4O95047 310 aa11.32□□□□□ -0.6
CD4-208ENST00000538827 IGLV2-23P01705 113 aa11.32□□□□□ -0.6
CD4-208ENST00000538827 P0C879 139 aa11.32□□□□□ -0.6
CD4-208ENST00000538827 LGALS7P47929 136 aa11.32□□□□□ -0.6
CD4-208ENST00000538827 UBE2KP61086 200 aa11.32□□□□□ -0.6
CD4-208ENST00000538827 CYCSP99999 105 aaKnown RBP11.32□□□□□ -0.6
CD4-208ENST00000538827 PSG5Q15238 335 aa11.32□□□□□ -0.6
CD4-208ENST00000538827 POU2AF1Q16633 256 aa11.32□□□□□ -0.6
CD4-208ENST00000538827 PUSL1Q8N0Z8 303 aaKnown RBP11.32□□□□□ -0.6
CD4-208ENST00000538827 OR2T35Q8NGX2 323 aa11.32□□□□□ -0.6
CD4-208ENST00000538827 VSTM2AQ8TAG5 236 aa11.32□□□□□ -0.6
CD4-208ENST00000538827 OR2A7Q96R45 310 aa11.32□□□□□ -0.6
CD4-208ENST00000538827 CLCC1Q96S66 551 aa11.32□□□□□ -0.6
CD4-208ENST00000538827 NEURL2Q9BR09 285 aa11.32□□□□□ -0.6
CD4-208ENST00000538827 QTRT1Q9BXR0 403 aaKnown RBP11.32□□□□□ -0.6
CD4-208ENST00000538827 NMES1Q9C002 83 aa11.32□□□□□ -0.6
CD4-208ENST00000538827 MEGF9Q9H1U4 602 aa11.32□□□□□ -0.6
CD4-208ENST00000538827 FBXL15Q9H469 300 aa11.32□□□□□ -0.6
CD4-208ENST00000538827 BET1LQ9NYM9 111 aa11.32□□□□□ -0.6
CD4-208ENST00000538827 FAM90A9PA6NNJ1 464 aa11.31□□□□□ -0.6
CD4-208ENST00000538827 WRBO00258 174 aa11.31□□□□□ -0.6
CD4-208ENST00000538827 SPDEFO95238 335 aa11.31□□□□□ -0.6
CD4-208ENST00000538827 NKX2-1P43699 371 aaPredicted RBP11.31□□□□□ -0.6
CD4-208ENST00000538827 GNB1P62873 340 aa11.31□□□□□ -0.6
CD4-208ENST00000538827 Q6ZRM9 215 aa11.31□□□□□ -0.6
CD4-208ENST00000538827 C9orf139Q6ZV77 190 aa11.31□□□□□ -0.6
CD4-208ENST00000538827 TMEM219Q86XT9 240 aa11.31□□□□□ -0.6
CD4-208ENST00000538827 OR4D5Q8NGN0 318 aa11.31□□□□□ -0.6
CD4-208ENST00000538827 PPP1R1CQ8WVI7 109 aa11.31□□□□□ -0.6
CD4-208ENST00000538827 ASB13Q8WXK3 278 aa11.31□□□□□ -0.6
CD4-208ENST00000538827 TNFRSF19Q9NS68 423 aa11.31□□□□□ -0.6
CD4-208ENST00000538827 RCL1Q9Y2P8 373 aaKnown RBP11.31□□□□□ -0.6
CD4-208ENST00000538827 TET2Q6N021 2002 aaPredicted RBP11.31□□□□□ -0.6
CD4-208ENST00000538827 BTBD17A6NE02 478 aa11.3□□□□□ -0.6
CD4-208ENST00000538827 C15orf61A6NNL5 157 aa11.3□□□□□ -0.6
CD4-208ENST00000538827 HAX1O00165 279 aa11.3□□□□□ -0.6
CD4-208ENST00000538827 UPK2O00526 184 aa11.3□□□□□ -0.6
CD4-208ENST00000538827 RRHO14718 337 aa11.3□□□□□ -0.6
CD4-208ENST00000538827 SLC25A6P12236 298 aa11.3□□□□□ -0.6
CD4-208ENST00000538827 MYOD1P15172 320 aa11.3□□□□□ -0.6
CD4-208ENST00000538827 F2RL1P55085 397 aa11.3□□□□□ -0.6
CD4-208ENST00000538827 RELBQ01201 579 aa11.3□□□□□ -0.6
CD4-208ENST00000538827 RAB32Q13637 225 aa11.3□□□□□ -0.6
CD4-208ENST00000538827 SPINK9Q5DT21 86 aa11.3□□□□□ -0.6
CD4-208ENST00000538827 THNSL2Q86YJ6 484 aa11.3□□□□□ -0.6
CD4-208ENST00000538827 TCTE3Q8IZS6 198 aa11.3□□□□□ -0.6
CD4-208ENST00000538827 OR4A5Q8NH83 315 aa11.3□□□□□ -0.6
CD4-208ENST00000538827 TMEM167AQ8TBQ9 72 aa11.3□□□□□ -0.6
CD4-208ENST00000538827 RNF5Q99942 180 aa11.3□□□□□ -0.6
CD4-208ENST00000538827 SLC25A33Q9BSK2 321 aa11.3□□□□□ -0.6
CD4-208ENST00000538827 HINT2Q9BX68 163 aa11.3□□□□□ -0.6
CD4-208ENST00000538827 MAGT1Q9H0U3 335 aa11.3□□□□□ -0.6
CD4-208ENST00000538827 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.3□□□□□ -0.6
CD4-208ENST00000538827 PRNDQ9UKY0 176 aa11.3□□□□□ -0.6
CD4-208ENST00000538827 FXYD6-FXYD2A0A087WZ82 144 aa11.29□□□□□ -0.6
CD4-208ENST00000538827 ST8SIA3O43173 380 aa11.29□□□□□ -0.6
CD4-208ENST00000538827 SSSCA1O60232 199 aa11.29□□□□□ -0.6
CD4-208ENST00000538827 IFNA17P01571 189 aa11.29□□□□□ -0.6
CD4-208ENST00000538827 HOXA1P49639 335 aaPredicted RBP11.29□□□□□ -0.6
CD4-208ENST00000538827 DYNLT3P51808 116 aa11.29□□□□□ -0.6
CD4-208ENST00000538827 RPL8P62917 257 aaKnown RBP11.29□□□□□ -0.6
CD4-208ENST00000538827 SRSF4Q08170 494 aaKnown RBP11.29□□□□□ -0.6
CD4-208ENST00000538827 EBI3Q14213 229 aa11.29□□□□□ -0.6
CD4-208ENST00000538827 TNXAQ16473 311 aa11.29□□□□□ -0.6
CD4-208ENST00000538827 ZFP69Q49AA0 526 aa11.29□□□□□ -0.6
CD4-208ENST00000538827 CXorf66Q5JRM2 361 aaPredicted RBP11.29□□□□□ -0.6
CD4-208ENST00000538827 Q8N6K4 173 aa11.29□□□□□ -0.6
CD4-208ENST00000538827 SIGLECL1Q8N7X8 197 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms