RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 APOC4P55056 127 aa10.42□□□□□ -0.74
SMARCA4-206ENST00000538456 IRF3Q14653 427 aa10.42□□□□□ -0.74
SMARCA4-206ENST00000538456 NEDD8Q15843 81 aa10.42□□□□□ -0.74
SMARCA4-206ENST00000538456 FAM106AQ4KMX7 169 aa10.42□□□□□ -0.74
SMARCA4-206ENST00000538456 WFDC3Q8IUB2 231 aa10.42□□□□□ -0.74
SMARCA4-206ENST00000538456 VKORC1L1Q8N0U8 176 aa10.42□□□□□ -0.74
SMARCA4-206ENST00000538456 OR1L6Q8NGR2 347 aa10.42□□□□□ -0.74
SMARCA4-206ENST00000538456 FCGR1BQ92637 280 aa10.42□□□□□ -0.74
SMARCA4-206ENST00000538456 TMEM203Q969S6 136 aa10.42□□□□□ -0.74
SMARCA4-206ENST00000538456 FYTTD1Q96QD9 318 aaKnown RBP10.42□□□□□ -0.74
SMARCA4-206ENST00000538456 ACOT13Q9NPJ3 140 aa10.42□□□□□ -0.74
SMARCA4-206ENST00000538456 UBQLN2Q9UHD9 624 aa10.42□□□□□ -0.74
SMARCA4-206ENST00000538456 TP53TG1Q9Y2A0 90 aa10.42□□□□□ -0.74
SMARCA4-206ENST00000538456 KCNK7Q9Y2U2 307 aa10.42□□□□□ -0.74
SMARCA4-206ENST00000538456 AK6Q9Y3D8 172 aaKnown RBP10.42□□□□□ -0.74
SMARCA4-206ENST00000538456 A0A075B6Q4 140 aa10.41□□□□□ -0.74
SMARCA4-206ENST00000538456 J3QRK9 145 aa10.41□□□□□ -0.74
SMARCA4-206ENST00000538456 FCGR3BO75015 233 aa10.41□□□□□ -0.74
SMARCA4-206ENST00000538456 PLA2G7Q13093 441 aa10.41□□□□□ -0.74
SMARCA4-206ENST00000538456 UNQ9165/PRO28630Q6UXU0 137 aa10.41□□□□□ -0.74
SMARCA4-206ENST00000538456 RBPMS2Q6ZRY4 209 aaKnown RBP10.41□□□□□ -0.74
SMARCA4-206ENST00000538456 Q6ZWC4 215 aa10.41□□□□□ -0.74
SMARCA4-206ENST00000538456 GPR141Q7Z602 305 aa10.41□□□□□ -0.74
SMARCA4-206ENST00000538456 PHLDA1Q8WV24 401 aaPredicted RBP10.41□□□□□ -0.74
SMARCA4-206ENST00000538456 MND1Q9BWT6 205 aa10.41□□□□□ -0.74
SMARCA4-206ENST00000538456 AREGP15514 252 aa10.4□□□□□ -0.74
SMARCA4-206ENST00000538456 MAP2K4P45985 399 aa10.4□□□□□ -0.74
SMARCA4-206ENST00000538456 ZNF585BQ52M93 769 aa10.4□□□□□ -0.74
SMARCA4-206ENST00000538456 UBE2UQ5VVX9 321 aa10.4□□□□□ -0.74
SMARCA4-206ENST00000538456 LGALS9CQ6DKI2 356 aa10.4□□□□□ -0.74
SMARCA4-206ENST00000538456 OR4A47Q6IF82 309 aa10.4□□□□□ -0.74
SMARCA4-206ENST00000538456 KCTD9Q7L273 389 aa10.4□□□□□ -0.74
SMARCA4-206ENST00000538456 EEF1AKMT3Q96AZ1 226 aa10.4□□□□□ -0.74
SMARCA4-206ENST00000538456 FAM3DQ96BQ1 224 aa10.4□□□□□ -0.74
SMARCA4-206ENST00000538456 RAB3CQ96E17 227 aa10.4□□□□□ -0.74
SMARCA4-206ENST00000538456 FANCD2OSQ96PS1 177 aa10.4□□□□□ -0.74
SMARCA4-206ENST00000538456 IGHV3-35A0A0C4DH35 117 aa10.39□□□□□ -0.75
SMARCA4-206ENST00000538456 NPIPB5A8MRT5 1133 aa10.39□□□□□ -0.75
SMARCA4-206ENST00000538456 E7EUB6 86 aa10.39□□□□□ -0.75
SMARCA4-206ENST00000538456 DIRAS3O95661 229 aa10.39□□□□□ -0.75
SMARCA4-206ENST00000538456 REG1AP05451 166 aa10.39□□□□□ -0.75
SMARCA4-206ENST00000538456 IL6RP08887 468 aaPredicted RBP10.39□□□□□ -0.75
SMARCA4-206ENST00000538456 GNB3P16520 340 aa10.39□□□□□ -0.75
SMARCA4-206ENST00000538456 RPL27AP46776 148 aaKnown RBP10.39□□□□□ -0.75
SMARCA4-206ENST00000538456 SPHARQ15513 63 aa10.39□□□□□ -0.75
SMARCA4-206ENST00000538456 MED22Q15528 200 aa10.39□□□□□ -0.75
SMARCA4-206ENST00000538456 C2orf76Q3KRA6 126 aa10.39□□□□□ -0.75
SMARCA4-206ENST00000538456 LIPKQ5VXJ0 399 aa10.39□□□□□ -0.75
SMARCA4-206ENST00000538456 ZNF367Q7RTV3 350 aa10.39□□□□□ -0.75
SMARCA4-206ENST00000538456 H1FOOQ8IZA3 346 aaPredicted RBP10.39□□□□□ -0.75
SMARCA4-206ENST00000538456 OR2C3Q8N628 320 aa10.39□□□□□ -0.75
SMARCA4-206ENST00000538456 TMEM217Q8N7C4 229 aa10.39□□□□□ -0.75
SMARCA4-206ENST00000538456 OR13F1Q8NGS4 319 aa10.39□□□□□ -0.75
SMARCA4-206ENST00000538456 RBM38Q9H0Z9 239 aaKnown RBP10.39□□□□□ -0.75
SMARCA4-206ENST00000538456 OR51E2Q9H255 320 aa10.39□□□□□ -0.75
SMARCA4-206ENST00000538456 TMEM272A0A1B0GTI8 110 aa10.38□□□□□ -0.75
SMARCA4-206ENST00000538456 A0A1B0GW64 132 aa10.38□□□□□ -0.75
SMARCA4-206ENST00000538456 MFSD2BA6NFX1 497 aa10.38□□□□□ -0.75
SMARCA4-206ENST00000538456 KBTBD11O94819 623 aa10.38□□□□□ -0.75
SMARCA4-206ENST00000538456 RPL35AP18077 110 aaKnown RBP10.38□□□□□ -0.75
SMARCA4-206ENST00000538456 ATF4P18848 351 aaPredicted RBP10.38□□□□□ -0.75
SMARCA4-206ENST00000538456 HES5Q5TA89 166 aa10.38□□□□□ -0.75
SMARCA4-206ENST00000538456 SLC38A6Q8IZM9 456 aa10.38□□□□□ -0.75
SMARCA4-206ENST00000538456 STPG3Q8N7X2 389 aa10.38□□□□□ -0.75
SMARCA4-206ENST00000538456 GATAD1Q8WUU5 269 aa10.38□□□□□ -0.75
SMARCA4-206ENST00000538456 RNF183Q96D59 192 aa10.38□□□□□ -0.75
SMARCA4-206ENST00000538456 SLC2A9Q9NRM0 540 aa10.38□□□□□ -0.75
SMARCA4-206ENST00000538456 MRPS7Q9Y2R9 242 aaKnown RBP10.38□□□□□ -0.75
SMARCA4-206ENST00000538456 LSM2Q9Y333 95 aaKnown RBP10.38□□□□□ -0.75
SMARCA4-206ENST00000538456 PRELID3BQ9Y3B1 194 aa10.38□□□□□ -0.75
SMARCA4-206ENST00000538456 IGKV1D-8A0A087WSZ0 117 aa10.37□□□□□ -0.75
SMARCA4-206ENST00000538456 TRAV25A0A0B4J276 109 aa10.37□□□□□ -0.75
SMARCA4-206ENST00000538456 UBE2CO00762 179 aa10.37□□□□□ -0.75
SMARCA4-206ENST00000538456 DHFRP00374 187 aa10.37□□□□□ -0.75
SMARCA4-206ENST00000538456 CLEC3BP05452 202 aa10.37□□□□□ -0.75
SMARCA4-206ENST00000538456 ZNF735P0CB33 412 aa10.37□□□□□ -0.75
SMARCA4-206ENST00000538456 DEFA4P12838 97 aa10.37□□□□□ -0.75
SMARCA4-206ENST00000538456 MYOD1P15172 320 aa10.37□□□□□ -0.75
SMARCA4-206ENST00000538456 CALRP27797 417 aaKnown RBP10.37□□□□□ -0.75
SMARCA4-206ENST00000538456 PSMB6P28072 239 aa10.37□□□□□ -0.75
SMARCA4-206ENST00000538456 GPR183P32249 361 aa10.37□□□□□ -0.75
SMARCA4-206ENST00000538456 RPS25P62851 125 aaKnown RBP10.37□□□□□ -0.75
SMARCA4-206ENST00000538456 RPL30P62888 115 aaKnown RBP10.37□□□□□ -0.75
SMARCA4-206ENST00000538456 TMEM91Q6ZNR0 172 aa10.37□□□□□ -0.75
SMARCA4-206ENST00000538456 ZNF645Q8N7E2 425 aa10.37□□□□□ -0.75
SMARCA4-206ENST00000538456 UFD1Q92890 307 aa10.37□□□□□ -0.75
SMARCA4-206ENST00000538456 OR2A7Q96R45 310 aa10.37□□□□□ -0.75
SMARCA4-206ENST00000538456 VPS13DQ5THJ4 4388 aa10.37□□□□□ -0.75
SMARCA4-206ENST00000538456 KIR2DL5BA0A0G2JN68 375 aa10.36□□□□□ -0.75
SMARCA4-206ENST00000538456 KIR2DL5BA0A0G2JPC4 375 aa10.36□□□□□ -0.75
SMARCA4-206ENST00000538456 ZNF701M0R085 212 aaPredicted RBP10.36□□□□□ -0.75
SMARCA4-206ENST00000538456 RAB27BO00194 218 aa10.36□□□□□ -0.75
SMARCA4-206ENST00000538456 MFNGO00587 321 aa10.36□□□□□ -0.75
SMARCA4-206ENST00000538456 ARL6IP5O75915 188 aa10.36□□□□□ -0.75
SMARCA4-206ENST00000538456 S1PR2O95136 353 aa10.36□□□□□ -0.75
SMARCA4-206ENST00000538456 CRYGCP07315 174 aa10.36□□□□□ -0.75
SMARCA4-206ENST00000538456 CD36P16671 472 aa10.36□□□□□ -0.75
SMARCA4-206ENST00000538456 CTRB1P17538 263 aa10.36□□□□□ -0.75
SMARCA4-206ENST00000538456 GADD45AP24522 165 aa10.36□□□□□ -0.75
SMARCA4-206ENST00000538456 PSMB9P28065 219 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms