RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 HLA-GP17693 338 aa8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 NKX2-1P43699 371 aaPredicted RBP8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 LY6EQ16553 131 aa8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 C2orf68Q2NKX9 166 aa8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 ARSJQ5FYB0 599 aaPredicted RBP8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 KLF17Q5JT82 389 aaPredicted RBP8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 OR4A47Q6IF82 309 aa8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 THNSL2Q86YJ6 484 aa8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 MRPL41Q8IXM3 137 aaKnown RBP8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 DYNAPQ8N1N2 210 aa8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 OR2T35Q8NGX2 323 aa8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 OR4A5Q8NH83 315 aa8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 EAF1Q96JC9 268 aaPredicted RBP8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 OR10C1Q96KK4 312 aa8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 NMES1Q9C002 83 aa8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 PRNDQ9UKY0 176 aa8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 PAIP2BQ9ULR5 123 aaKnown RBP8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 NSG2Q9Y328 171 aa8.58□□□□□ -1.04
TNFRSF1A-211ENST00000538363 DBX1A6NMT0 343 aa8.57□□□□□ -1.04
TNFRSF1A-211ENST00000538363 ST8SIA3O43173 380 aa8.57□□□□□ -1.04
TNFRSF1A-211ENST00000538363 LY6G6DO95868 133 aa8.57□□□□□ -1.04
TNFRSF1A-211ENST00000538363 IGKV1-39P01597 117 aa8.57□□□□□ -1.04
TNFRSF1A-211ENST00000538363 IGKV1-5P01602 117 aa8.57□□□□□ -1.04
TNFRSF1A-211ENST00000538363 IGKV1D-39P04432 117 aa8.57□□□□□ -1.04
TNFRSF1A-211ENST00000538363 SAA1P0DJI8 122 aaPredicted RBP8.57□□□□□ -1.04
TNFRSF1A-211ENST00000538363 PSMB6P28072 239 aa8.57□□□□□ -1.04
TNFRSF1A-211ENST00000538363 F2RL1P55085 397 aa8.57□□□□□ -1.04
TNFRSF1A-211ENST00000538363 OR2B8PP59922 312 aa8.57□□□□□ -1.04
TNFRSF1A-211ENST00000538363 UBE2KP61086 200 aa8.57□□□□□ -1.04
TNFRSF1A-211ENST00000538363 PSG5Q15238 335 aa8.57□□□□□ -1.04
TNFRSF1A-211ENST00000538363 IZUMO4Q1ZYL8 232 aa8.57□□□□□ -1.04
TNFRSF1A-211ENST00000538363 DEFB112Q30KQ8 113 aa8.57□□□□□ -1.04
TNFRSF1A-211ENST00000538363 ZFP69Q49AA0 526 aa8.57□□□□□ -1.04
TNFRSF1A-211ENST00000538363 C9orf152Q5JTZ5 239 aa8.57□□□□□ -1.04
TNFRSF1A-211ENST00000538363 TEX45Q8NA69 505 aa8.57□□□□□ -1.04
TNFRSF1A-211ENST00000538363 CHAC2Q8WUX2 184 aa8.57□□□□□ -1.04
TNFRSF1A-211ENST00000538363 MEGF9Q9H1U4 602 aa8.57□□□□□ -1.04
TNFRSF1A-211ENST00000538363 FBXL15Q9H469 300 aa8.57□□□□□ -1.04
TNFRSF1A-211ENST00000538363 OR51B2Q9Y5P1 312 aa8.57□□□□□ -1.04
TNFRSF1A-211ENST00000538363 FXYD6-FXYD2A0A087WZ82 144 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 FAM90A9PA6NNJ1 464 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 MPTX1A8MV57 137 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 UPK2O00526 184 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 RRHO14718 337 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 GPR137BO60478 399 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 KBTBD11O94819 623 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 SPDEFO95238 335 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 OPN1MWP04001 364 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 FGF2P09038 288 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 OPN1MW2P0DN77 364 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 OPN1MW3P0DN78 364 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 SLC25A6P12236 298 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 HOXA1P49639 335 aaPredicted RBP8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 H2BFSP57053 126 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 BRWD1-AS2P59051 145 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 RPL23AP62750 156 aaKnown RBP8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 RPL8P62917 257 aaKnown RBP8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 TNXAQ16473 311 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 LDLRAD2Q5SZI1 272 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 Q71RC1 249 aaPredicted RBP8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 MMD2Q8IY49 270 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 BCL6BQ8N143 479 aaPredicted RBP8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 OR8H1Q8NGG4 311 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 CFHR4Q92496 578 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 FYTTD1Q96QD9 318 aaKnown RBP8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 SLC25A33Q9BSK2 321 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 MAGT1Q9H0U3 335 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 HIPK2Q9H2X6 1198 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 BET1LQ9NYM9 111 aa8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 SOX21Q9Y651 276 aaPredicted RBP8.56□□□□□ -1.04
TNFRSF1A-211ENST00000538363 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.55□□□□□ -1.041e-6■■■□□ 14.9
TNFRSF1A-211ENST00000538363 AKAP9Q99996 3911 aa8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 MDFIC2A0A1B0GVS7 189 aa8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 SMLR1H3BR10 107 aa8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 SSSCA1O60232 199 aa8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 OR9G9P0C7N8 305 aa8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 SRD5A1P18405 259 aa8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 CNTFRP26992 372 aa8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 RPP30P78346 268 aaKnown RBP8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 OXLD1Q5BKU9 147 aa8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 NMSQ5H8A3 153 aa8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 PPP1R27Q86WC6 154 aa8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 TMEM219Q86XT9 240 aa8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 INO80EQ8NBZ0 244 aaPredicted RBP8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 OR1L8Q8NGR8 309 aa8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 OR5R1Q8NH85 324 aa8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 PPP1R1CQ8WVI7 109 aa8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 DCUN1D4Q92564 292 aa8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 RBMXL1Q96E39 390 aaKnown RBP8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 SMR3AQ99954 134 aa8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 QTRT1Q9BXR0 403 aaKnown RBP8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 HEYLQ9NQ87 328 aaPredicted RBP8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 CDC42EP3Q9UKI2 254 aa8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 RCL1Q9Y2P8 373 aaKnown RBP8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 OTOGQ6ZRI0 2925 aa8.55□□□□□ -1.04
TNFRSF1A-211ENST00000538363 A0A0G2JRQ6 117 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 SRRM4A7MD48 611 aaKnown RBP8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 FAM90A26D6RGX4 464 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 M0QZK8 103 aa8.54□□□□□ -1.04
TNFRSF1A-211ENST00000538363 SYNGR2O43760 224 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms