RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 FAM96BQ9Y3D0 163 aa3.5□□□□□ -1.85
SNHG1-208ENST00000538266 YLPM1P49750 1951 aaKnown RBP3.5□□□□□ -1.85
SNHG1-208ENST00000538266 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.5□□□□□ -1.853e-19■■■■■ 78.9
SNHG1-208ENST00000538266 ABCA1O95477 2261 aa3.5□□□□□ -1.85
SNHG1-208ENST00000538266 ITPR3Q14573 2671 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 SETXQ7Z333 2677 aaKnown RBP3.49□□□□□ -1.85
SNHG1-208ENST00000538266 ABCA2Q9BZC7 2435 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 DSCAML1Q8TD84 2053 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 IGHV3OR16-10A0A075B7F0 116 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 TRBV6-6A0A0A6YYG2 114 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 IGHV2-26A0A0B4J1V2 119 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 IGHV1-69DA0A0B4J2H0 117 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 TEX13DA0A0J9YY54 714 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-208ENST00000538266 C9orf170A2RU37 121 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 FOXI3A8MTJ6 420 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-208ENST00000538266 FAM25EA8MYX2 175 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 TRDCB7Z8K6 153 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 C12orf77C9JDV5 145 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 INAFM1C9JVW0 142 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 GPR31O00270 319 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 CCSO14618 274 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 NPFFO15130 113 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 FGF16O43320 207 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 IGHV1-69P01742 117 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 ARG1P05089 322 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 ZNF735P0CB33 412 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 SMIM6P0DI80 62 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 MMP9P14780 707 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 PAX6P26367 422 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 SAA4P35542 130 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 CEACAM3P40198 252 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 RPL35P42766 123 aaKnown RBP3.49□□□□□ -1.85
SNHG1-208ENST00000538266 GNG10P50151 68 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 RAB13P51153 203 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 UBE2E1P51965 193 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 ARHGDIBP52566 201 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 PRRX1P54821 245 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 DLX6P56179 175 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 TMEM50BP56557 158 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 BPIFB3P59826 476 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 HLA-DRB3P79483 266 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 CYCSP99999 105 aaKnown RBP3.49□□□□□ -1.85
SNHG1-208ENST00000538266 PRB3Q04118 309 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-208ENST00000538266 KLRD1Q13241 179 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 C17orf58Q2M2W7 97 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 ZNF260Q3ZCT1 412 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 LRRC37A5PQ49AS3 106 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 MIDNQ504T8 468 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 C10orf91Q5T1B1 145 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 EIF5AL1Q6IS14 154 aaKnown RBP3.49□□□□□ -1.85
SNHG1-208ENST00000538266 RBMS3Q6XE24 437 aaKnown RBP3.49□□□□□ -1.85
SNHG1-208ENST00000538266 BRD3OSQ6XYD6 125 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 IL17RELQ6ZVW7 336 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 RTN4RL2Q86UN3 420 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 PUSL1Q8N0Z8 303 aaKnown RBP3.49□□□□□ -1.85
SNHG1-208ENST00000538266 GAPTQ8N292 157 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 ABHD12Q8N2K0 398 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 PNKDQ8N490 385 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 Q8N7P7 452 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 OR10A7Q8NGE5 316 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 OR4A4PQ8NGN8 299 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 OR1S2Q8NGQ3 325 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 OR10X1Q8NGY0 326 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 OR1L1Q8NH94 360 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 OR10J5Q8NHC4 309 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 FAM110DQ8TAY7 271 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-208ENST00000538266 UBALD1Q8TB05 177 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 ZNF596Q8TC21 504 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 WIPF2Q8TF74 440 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-208ENST00000538266 MITD1Q8WV92 249 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 PPP1R1CQ8WVI7 109 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 DCUN1D4Q92564 292 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 TBX15Q96SF7 602 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 C12orf57Q99622 126 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 SLC6A7Q99884 636 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 NMES1Q9C002 83 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 TMEM133Q9H2Q1 129 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 LINC00574Q9H8X3 128 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 PLEKHA2Q9HB19 425 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 Q9N2K0 584 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 OR2S2Q9NQN1 319 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 ZFP57Q9NU63 452 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 IDI2-AS1Q9NZ38 188 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 ZNF230Q9UIE0 474 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-208ENST00000538266 VSIG4Q9Y279 399 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 AMMECR1Q9Y4X0 333 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-208ENST00000538266 MED13LQ71F56 2210 aa3.49□□□□□ -1.85
SNHG1-208ENST00000538266 FLNAP21333 2647 aaKnown RBP3.49□□□□□ -1.85
SNHG1-208ENST00000538266 F8P00451 2351 aa3.48□□□□□ -1.85
SNHG1-208ENST00000538266 ARHGAP32A7KAX9 2087 aa3.48□□□□□ -1.85
SNHG1-208ENST00000538266 WNK2Q9Y3S1 2297 aa3.48□□□□□ -1.85
SNHG1-208ENST00000538266 TRBV6-7A0A0A0MS04 114 aa3.48□□□□□ -1.85
SNHG1-208ENST00000538266 A0A0B4J2A0 478 aa3.48□□□□□ -1.85
SNHG1-208ENST00000538266 CENPVL3A0A0U1RRI6 287 aa3.48□□□□□ -1.85
SNHG1-208ENST00000538266 A0A1W2PRD5 423 aa3.48□□□□□ -1.85
SNHG1-208ENST00000538266 A0A1W2PRF3 423 aa3.48□□□□□ -1.85
SNHG1-208ENST00000538266 A0A1W2PRM7 423 aa3.48□□□□□ -1.85
SNHG1-208ENST00000538266 C5orf51A6NDU8 294 aa3.48□□□□□ -1.85
SNHG1-208ENST00000538266 BTBD17A6NE02 478 aa3.48□□□□□ -1.85
SNHG1-208ENST00000538266 NPIPB11E5RHQ5 1161 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms