RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 PLGLAQ15195 96 aa19.26■□□□□ 0.67
HMGA2-208ENST00000537429 LIN54Q6MZP7 749 aa19.26■□□□□ 0.67
HMGA2-208ENST00000537429 LYZL2Q7Z4W2 148 aa19.26■□□□□ 0.67
HMGA2-208ENST00000537429 PPP1R27Q86WC6 154 aa19.26■□□□□ 0.67
HMGA2-208ENST00000537429 TMEM140Q9NV12 185 aa19.26■□□□□ 0.67
HMGA2-208ENST00000537429 SHPKQ9UHJ6 478 aa19.26■□□□□ 0.67
HMGA2-208ENST00000537429 JMJD1CQ15652 2540 aa19.26■□□□□ 0.67
HMGA2-208ENST00000537429 C7orf66A4D0T2 115 aa19.25■□□□□ 0.67
HMGA2-208ENST00000537429 FAM181BA6NEQ2 426 aa19.25■□□□□ 0.67
HMGA2-208ENST00000537429 CREBL2O60519 120 aaPredicted RBP19.25■□□□□ 0.67
HMGA2-208ENST00000537429 P0C879 139 aa19.25■□□□□ 0.67
HMGA2-208ENST00000537429 AKR1C2P52895 323 aa19.25■□□□□ 0.67
HMGA2-208ENST00000537429 MRGPRG-AS1Q2M3A8 158 aa19.25■□□□□ 0.67
HMGA2-208ENST00000537429 TMEM167AQ8TBQ9 72 aa19.25■□□□□ 0.67
HMGA2-208ENST00000537429 RASL11BQ9BPW5 248 aa19.25■□□□□ 0.67
HMGA2-208ENST00000537429 A0A0G2JRQ6 117 aa19.25■□□□□ 0.67
HMGA2-208ENST00000537429 DUXBA0A1W2PPF3 345 aa19.25■□□□□ 0.67
HMGA2-208ENST00000537429 KBTBD11O94819 623 aa19.25■□□□□ 0.67
HMGA2-208ENST00000537429 CRYBA1P05813 215 aa19.25■□□□□ 0.67
HMGA2-208ENST00000537429 VDAC1P21796 283 aa19.25■□□□□ 0.67
HMGA2-208ENST00000537429 H2BFWTQ7Z2G1 175 aa19.25■□□□□ 0.67
HMGA2-208ENST00000537429 C12orf45Q8N5I9 185 aaPredicted RBP19.25■□□□□ 0.67
HMGA2-208ENST00000537429 LSM10Q969L4 123 aaKnown RBP19.25■□□□□ 0.67
HMGA2-208ENST00000537429 RRNAD1Q96FB5 475 aaKnown RBP19.25■□□□□ 0.67
HMGA2-208ENST00000537429 MMP24Q9Y5R2 645 aa19.25■□□□□ 0.67
HMGA2-208ENST00000537429 SETD2Q9BYW2 2564 aaPredicted RBP19.24■□□□□ 0.67
HMGA2-208ENST00000537429 DBX1A6NMT0 343 aa19.24■□□□□ 0.67
HMGA2-208ENST00000537429 FCN1O00602 326 aa19.24■□□□□ 0.67
HMGA2-208ENST00000537429 RPL15P61313 204 aaKnown RBP19.24■□□□□ 0.67
HMGA2-208ENST00000537429 BLCAPP62952 87 aa19.24■□□□□ 0.67
HMGA2-208ENST00000537429 FAM219AQ8IW50 185 aa19.24■□□□□ 0.67
HMGA2-208ENST00000537429 OR4A5Q8NH83 315 aa19.24■□□□□ 0.67
HMGA2-208ENST00000537429 TRAV3A0A0B4J244 114 aa19.23■□□□□ 0.67
HMGA2-208ENST00000537429 UPK2O00526 184 aa19.23■□□□□ 0.67
HMGA2-208ENST00000537429 HLA-DRB1P01911 266 aa19.23■□□□□ 0.67
HMGA2-208ENST00000537429 PJVKQ0ZLH3 352 aa19.23■□□□□ 0.67
HMGA2-208ENST00000537429 NMSQ5H8A3 153 aa19.23■□□□□ 0.67
HMGA2-208ENST00000537429 ALG5Q9Y673 324 aa19.23■□□□□ 0.67
HMGA2-208ENST00000537429 SH2D7A6NKC9 451 aaPredicted RBP19.22■□□□□ 0.67
HMGA2-208ENST00000537429 OR9G9P0C7N8 305 aa19.22■□□□□ 0.67
HMGA2-208ENST00000537429 PRSS8Q16651 343 aa19.22■□□□□ 0.67
HMGA2-208ENST00000537429 IZUMO4Q1ZYL8 232 aa19.22■□□□□ 0.67
HMGA2-208ENST00000537429 RNASE11Q8TAA1 199 aaKnown RBP19.22■□□□□ 0.67
HMGA2-208ENST00000537429 CLCC1Q96S66 551 aa19.22■□□□□ 0.67
HMGA2-208ENST00000537429 NPFFR1Q9GZQ6 430 aa19.22■□□□□ 0.67
HMGA2-208ENST00000537429 RANBP3Q9H6Z4 567 aaPredicted RBP19.22■□□□□ 0.67
HMGA2-208ENST00000537429 ZNF430Q9H8G1 570 aaPredicted RBP19.22■□□□□ 0.67
HMGA2-208ENST00000537429 TMED3Q9Y3Q3 217 aa19.22■□□□□ 0.67
HMGA2-208ENST00000537429 NF1P21359 2839 aa19.21■□□□□ 0.67
HMGA2-208ENST00000537429 ADAP1O75689 374 aa19.21■□□□□ 0.67
HMGA2-208ENST00000537429 HOXB5P09067 269 aa19.21■□□□□ 0.67
HMGA2-208ENST00000537429 C9orf152Q5JTZ5 239 aa19.21■□□□□ 0.67
HMGA2-208ENST00000537429 MMD2Q8IY49 270 aa19.21■□□□□ 0.67
HMGA2-208ENST00000537429 UXS1Q8NBZ7 420 aa19.21■□□□□ 0.67
HMGA2-208ENST00000537429 GPR146Q96CH1 333 aa19.21■□□□□ 0.67
HMGA2-208ENST00000537429 CA2P00918 260 aa19.2■□□□□ 0.66
HMGA2-208ENST00000537429 FGF2P09038 288 aa19.2■□□□□ 0.66
HMGA2-208ENST00000537429 RELBQ01201 579 aa19.2■□□□□ 0.66
HMGA2-208ENST00000537429 Q6ZRM9 215 aa19.2■□□□□ 0.66
HMGA2-208ENST00000537429 Q6ZS46 218 aa19.2■□□□□ 0.66
HMGA2-208ENST00000537429 OR51J1Q9H342 316 aa19.2■□□□□ 0.66
HMGA2-208ENST00000537429 NSG2Q9Y328 171 aa19.2■□□□□ 0.66
HMGA2-208ENST00000537429 RPL8P62917 257 aaKnown RBP19.2■□□□□ 0.66
HMGA2-208ENST00000537429 SSBP2P81877 361 aaPredicted RBP19.2■□□□□ 0.66
HMGA2-208ENST00000537429 GGNBP1Q5YKI7 109 aa19.2■□□□□ 0.66
HMGA2-208ENST00000537429 ZNF562Q6V9R5 426 aa19.2■□□□□ 0.66
HMGA2-208ENST00000537429 HSPB9Q9BQS6 159 aa19.2■□□□□ 0.66
HMGA2-208ENST00000537429 IGHV7-81A0A0B4J1V7 117 aa19.19■□□□□ 0.66
HMGA2-208ENST00000537429 SNAPC5O75971 98 aa19.19■□□□□ 0.66
HMGA2-208ENST00000537429 CX3CL1P78423 397 aa19.19■□□□□ 0.66
HMGA2-208ENST00000537429 PRIMA1Q86XR5 153 aa19.19■□□□□ 0.66
HMGA2-208ENST00000537429 PRSS22Q9GZN4 317 aa19.19■□□□□ 0.66
HMGA2-208ENST00000537429 IGHG2P01859 326 aa19.18■□□□□ 0.66
HMGA2-208ENST00000537429 ARSJQ5FYB0 599 aaPredicted RBP19.18■□□□□ 0.66
HMGA2-208ENST00000537429 TAF15Q92804 592 aaKnown RBP eCLIP19.18■□□□□ 0.665e-6■□□□□ 9.1
HMGA2-208ENST00000537429 ZNF702PQ9H963 129 aa19.18■□□□□ 0.66
HMGA2-208ENST00000537429 TNCP24821 2201 aa19.17■□□□□ 0.66
HMGA2-208ENST00000537429 C15orf61A6NNL5 157 aa19.17■□□□□ 0.66
HMGA2-208ENST00000537429 MPTX1A8MV57 137 aa19.17■□□□□ 0.66
HMGA2-208ENST00000537429 IFNA21P01568 189 aa19.17■□□□□ 0.66
HMGA2-208ENST00000537429 HLA-GP17693 338 aa19.17■□□□□ 0.66
HMGA2-208ENST00000537429 MAS1LP35410 378 aa19.17■□□□□ 0.66
HMGA2-208ENST00000537429 GNB1P62873 340 aa19.17■□□□□ 0.66
HMGA2-208ENST00000537429 TNXAQ16473 311 aa19.17■□□□□ 0.66
HMGA2-208ENST00000537429 Q6ZNX1 250 aa19.17■□□□□ 0.66
HMGA2-208ENST00000537429 FOXRED2Q8IWF2 684 aa19.17■□□□□ 0.66
HMGA2-208ENST00000537429 Q8N2B8 174 aa19.17■□□□□ 0.66
HMGA2-208ENST00000537429 OR4A16Q8NH70 328 aa19.17■□□□□ 0.66
HMGA2-208ENST00000537429 TMEM14BQ9NUH8 114 aa19.17■□□□□ 0.66
HMGA2-208ENST00000537429 CACNG5Q9UF02 275 aa19.17■□□□□ 0.66
HMGA2-208ENST00000537429 PRNDQ9UKY0 176 aa19.17■□□□□ 0.66
HMGA2-208ENST00000537429 PLXNB1O43157 2135 aa19.17■□□□□ 0.66
HMGA2-208ENST00000537429 A0A1B0GU03 582 aa19.16■□□□□ 0.66
HMGA2-208ENST00000537429 TSPAN9O75954 239 aa19.16■□□□□ 0.66
HMGA2-208ENST00000537429 ACTL6BO94805 426 aa19.16■□□□□ 0.66
HMGA2-208ENST00000537429 SLC25A6P12236 298 aa19.16■□□□□ 0.66
HMGA2-208ENST00000537429 OR2B8PP59922 312 aa19.16■□□□□ 0.66
HMGA2-208ENST00000537429 C2orf68Q2NKX9 166 aa19.16■□□□□ 0.66
HMGA2-208ENST00000537429 Q6ZSV7 163 aa19.16■□□□□ 0.66
HMGA2-208ENST00000537429 COA4Q9NYJ1 87 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms