RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 LST1O00453 97 aa2.28□□□□□ -2.04
PRKDC-208ENST00000536710 CREBL2O60519 120 aaPredicted RBP2.28□□□□□ -2.04
PRKDC-208ENST00000536710 IGKV1-16P04430 117 aa2.28□□□□□ -2.04
PRKDC-208ENST00000536710 HIST1H1EP10412 219 aaKnown RBP2.28□□□□□ -2.04
PRKDC-208ENST00000536710 HAAOP46952 286 aa2.28□□□□□ -2.04
PRKDC-208ENST00000536710 RAP1GDS1P52306 607 aa2.28□□□□□ -2.04
PRKDC-208ENST00000536710 TNFAIP6P98066 277 aaPredicted RBP2.28□□□□□ -2.04
PRKDC-208ENST00000536710 TNFAIP8L3Q5GJ75 292 aa2.28□□□□□ -2.04
PRKDC-208ENST00000536710 ZNF705AQ6ZN79 300 aaPredicted RBP2.28□□□□□ -2.04
PRKDC-208ENST00000536710 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
PRKDC-208ENST00000536710 DCXRQ7Z4W1 244 aa2.28□□□□□ -2.04
PRKDC-208ENST00000536710 DEFB125Q8N687 156 aa2.28□□□□□ -2.04
PRKDC-208ENST00000536710 Q8NDZ9 215 aa2.28□□□□□ -2.04
PRKDC-208ENST00000536710 PPP1R14BQ96C90 147 aa2.28□□□□□ -2.04
PRKDC-208ENST00000536710 IMMP2LQ96T52 175 aa2.28□□□□□ -2.04
PRKDC-208ENST00000536710 OTOFQ9HC10 1997 aa2.28□□□□□ -2.04
PRKDC-208ENST00000536710 LAMC3Q9Y6N6 1575 aa2.27□□□□□ -2.05
PRKDC-208ENST00000536710 NUP160Q12769 1436 aa2.27□□□□□ -2.05
PRKDC-208ENST00000536710 A0A1B0GV50 99 aa2.27□□□□□ -2.05
PRKDC-208ENST00000536710 KCNE1P15382 129 aa2.27□□□□□ -2.05
PRKDC-208ENST00000536710 CEBPGP53567 150 aa2.27□□□□□ -2.05
PRKDC-208ENST00000536710 RAB5BP61020 215 aa2.27□□□□□ -2.05
PRKDC-208ENST00000536710 DEFB103AP81534 67 aa2.27□□□□□ -2.05
PRKDC-208ENST00000536710 CAV1Q03135 178 aa2.27□□□□□ -2.05
PRKDC-208ENST00000536710 IMPG1Q17R60 797 aa2.27□□□□□ -2.05
PRKDC-208ENST00000536710 FAM201AQ5SY85 155 aa2.27□□□□□ -2.05
PRKDC-208ENST00000536710 SSX8Q7RTT4 187 aa2.27□□□□□ -2.05
PRKDC-208ENST00000536710 OR8J2Q8NGG1 315 aa2.27□□□□□ -2.05
PRKDC-208ENST00000536710 DCANP1Q8TF63 244 aa2.27□□□□□ -2.05
PRKDC-208ENST00000536710 CCDC42Q96M95 316 aa2.27□□□□□ -2.05
PRKDC-208ENST00000536710 TIMM9Q9Y5J7 89 aa2.27□□□□□ -2.05
PRKDC-208ENST00000536710 PRDM2Q13029 1718 aa2.27□□□□□ -2.05
PRKDC-208ENST00000536710 MROH2BQ7Z745 1585 aa2.27□□□□□ -2.05
PRKDC-208ENST00000536710 A8MUN3 132 aa2.26□□□□□ -2.05
PRKDC-208ENST00000536710 I3L521 148 aa2.26□□□□□ -2.05
PRKDC-208ENST00000536710 S100A7P31151 101 aa2.26□□□□□ -2.05
PRKDC-208ENST00000536710 CSN1S1P47710 185 aa2.26□□□□□ -2.05
PRKDC-208ENST00000536710 OR4D2P58180 307 aa2.26□□□□□ -2.05
PRKDC-208ENST00000536710 SPCS3P61009 180 aa2.26□□□□□ -2.05
PRKDC-208ENST00000536710 TMEM258P61165 79 aa2.26□□□□□ -2.05
PRKDC-208ENST00000536710 PMAIP1Q13794 54 aa2.26□□□□□ -2.05
PRKDC-208ENST00000536710 LRRC28Q86X40 367 aaPredicted RBP2.26□□□□□ -2.05
PRKDC-208ENST00000536710 CNBD2Q96M20 576 aa2.26□□□□□ -2.05
PRKDC-208ENST00000536710 PAQR5Q9NXK6 330 aaPredicted RBP2.26□□□□□ -2.05
PRKDC-208ENST00000536710 RBM7Q9Y580 266 aaKnown RBP2.26□□□□□ -2.05
PRKDC-208ENST00000536710 NESP48681 1621 aa2.26□□□□□ -2.05
PRKDC-208ENST00000536710 PXDNLA1KZ92 1463 aa2.26□□□□□ -2.05
PRKDC-208ENST00000536710 MYO3BQ8WXR4 1341 aa2.25□□□□□ -2.05
PRKDC-208ENST00000536710 IGLV3-9A0A075B6K5 115 aa2.25□□□□□ -2.05
PRKDC-208ENST00000536710 TMSB15BA0A087X1C1 80 aa2.25□□□□□ -2.05
PRKDC-208ENST00000536710 A0A0J9YW62 118 aa2.25□□□□□ -2.05
PRKDC-208ENST00000536710 A0A1B0GVG6 124 aa2.25□□□□□ -2.05
PRKDC-208ENST00000536710 H3BT86 120 aa2.25□□□□□ -2.05
PRKDC-208ENST00000536710 E2F6O75461 281 aa2.25□□□□□ -2.05
PRKDC-208ENST00000536710 S1PR2O95136 353 aa2.25□□□□□ -2.05
PRKDC-208ENST00000536710 LYPLA2O95372 231 aa2.25□□□□□ -2.05
PRKDC-208ENST00000536710 NSA2O95478 260 aaKnown RBP2.25□□□□□ -2.05
PRKDC-208ENST00000536710 KRT75O95678 551 aa2.25□□□□□ -2.05
PRKDC-208ENST00000536710 RPS17P08708 135 aaKnown RBP2.25□□□□□ -2.05
PRKDC-208ENST00000536710 TFPTP0C1Z6 253 aa2.25□□□□□ -2.05
PRKDC-208ENST00000536710 ZNF705DP0CH99 300 aaPredicted RBP2.25□□□□□ -2.05
PRKDC-208ENST00000536710 HIST3H3Q16695 136 aa2.25□□□□□ -2.05
PRKDC-208ENST00000536710 OR2T4Q8NH00 348 aa2.25□□□□□ -2.05
PRKDC-208ENST00000536710 ROPN1LQ96C74 230 aa2.25□□□□□ -2.05
PRKDC-208ENST00000536710 IMP4Q96G21 291 aaKnown RBP2.25□□□□□ -2.05
PRKDC-208ENST00000536710 PRO2289Q9P1D8 64 aa2.25□□□□□ -2.05
PRKDC-208ENST00000536710 NAT8Q9UHE5 227 aa2.25□□□□□ -2.05
PRKDC-208ENST00000536710 RTEL1-TNFRSF6BF6WH68 1400 aa2.25□□□□□ -2.05
PRKDC-208ENST00000536710 WIZO95785 1651 aa2.25□□□□□ -2.05
PRKDC-208ENST00000536710 EEF1E1-BLOC1S5C9J1V9 151 aa2.24□□□□□ -2.05
PRKDC-208ENST00000536710 INMT-MINDY4F8WBC2 141 aa2.24□□□□□ -2.05
PRKDC-208ENST00000536710 GOLGA6L19H0YKK7 550 aa2.24□□□□□ -2.05
PRKDC-208ENST00000536710 IFNA16P05015 189 aa2.24□□□□□ -2.05
PRKDC-208ENST00000536710 PSMB8P28062 276 aa2.24□□□□□ -2.05
PRKDC-208ENST00000536710 SULT1A1P50225 295 aa2.24□□□□□ -2.05
PRKDC-208ENST00000536710 KRTAP12-1P59990 96 aa2.24□□□□□ -2.05
PRKDC-208ENST00000536710 TPI1P60174 286 aa2.24□□□□□ -2.05
PRKDC-208ENST00000536710 POLR2GP62487 172 aaKnown RBP eCLIP2.24□□□□□ -2.05
PRKDC-208ENST00000536710 SLC38A11Q08AI6 406 aa2.24□□□□□ -2.05
PRKDC-208ENST00000536710 OR2F1Q13607 317 aa2.24□□□□□ -2.05
PRKDC-208ENST00000536710 GLT8D1Q68CQ7 371 aa2.24□□□□□ -2.05
PRKDC-208ENST00000536710 LYZL1Q6UWQ5 148 aa2.24□□□□□ -2.05
PRKDC-208ENST00000536710 Q6ZTI0 123 aa2.24□□□□□ -2.05
PRKDC-208ENST00000536710 OR1M1Q8NGA1 313 aa2.24□□□□□ -2.05
PRKDC-208ENST00000536710 OR1L8Q8NGR8 309 aa2.24□□□□□ -2.05
PRKDC-208ENST00000536710 SLC35B4Q969S0 331 aa2.24□□□□□ -2.05
PRKDC-208ENST00000536710 ERMAPQ96PL5 475 aaPredicted RBP2.24□□□□□ -2.05
PRKDC-208ENST00000536710 TIMM21Q9BVV7 248 aa2.24□□□□□ -2.05
PRKDC-208ENST00000536710 IGHV3-64A0A075B6Q5 118 aa2.23□□□□□ -2.05
PRKDC-208ENST00000536710 SRP19P09132 144 aaKnown RBP2.23□□□□□ -2.05
PRKDC-208ENST00000536710 ALDH3A1P30838 453 aa2.23□□□□□ -2.05
PRKDC-208ENST00000536710 RPL28P46779 137 aaKnown RBP2.23□□□□□ -2.05
PRKDC-208ENST00000536710 GLO1Q04760 184 aa2.23□□□□□ -2.05
PRKDC-208ENST00000536710 GRK1Q15835 563 aa2.23□□□□□ -2.05
PRKDC-208ENST00000536710 TRAPPC5Q8IUR0 188 aa2.23□□□□□ -2.05
PRKDC-208ENST00000536710 OR5B17Q8NGF7 314 aa2.23□□□□□ -2.05
PRKDC-208ENST00000536710 ACOT12Q8WYK0 555 aa2.23□□□□□ -2.05
PRKDC-208ENST00000536710 ANKRD7Q92527 254 aa2.23□□□□□ -2.05
PRKDC-208ENST00000536710 XAGE1AQ9HD64 81 aa2.23□□□□□ -2.05
PRKDC-208ENST00000536710 ERCC6Q03468 1493 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms