RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 ZNF439Q8NDP4 499 aa13.32□□□□□ -0.28
MCF2L-232ENST00000535094 OR13A1Q8NGR1 328 aa13.32□□□□□ -0.28
MCF2L-232ENST00000535094 LRRC29Q8WV35 223 aa13.32□□□□□ -0.28
MCF2L-232ENST00000535094 TRIB1Q96RU8 372 aa13.32□□□□□ -0.28
MCF2L-232ENST00000535094 MS4A5Q9H3V2 200 aa13.32□□□□□ -0.28
MCF2L-232ENST00000535094 IGHV3-48P01763 117 aa13.31□□□□□ -0.28
MCF2L-232ENST00000535094 CDKN1AP38936 164 aa13.31□□□□□ -0.28
MCF2L-232ENST00000535094 Q6ZSR3 168 aa13.31□□□□□ -0.28
MCF2L-232ENST00000535094 LINC00596Q86U02 117 aa13.31□□□□□ -0.28
MCF2L-232ENST00000535094 LINC00473A8K010 186 aa13.31□□□□□ -0.28
MCF2L-232ENST00000535094 FAM90A26D6RGX4 464 aa13.31□□□□□ -0.28
MCF2L-232ENST00000535094 CRYBB3P26998 211 aa13.31□□□□□ -0.28
MCF2L-232ENST00000535094 CAMPP49913 170 aa13.31□□□□□ -0.28
MCF2L-232ENST00000535094 HNRNPA3P51991 378 aaKnown RBP13.31□□□□□ -0.28
MCF2L-232ENST00000535094 SSPNQ14714 243 aa13.31□□□□□ -0.28
MCF2L-232ENST00000535094 RPEL1Q2QD12 228 aa13.31□□□□□ -0.28
MCF2L-232ENST00000535094 SPATA31B1PQ5VZV4 182 aa13.31□□□□□ -0.28
MCF2L-232ENST00000535094 PQLC2Q6ZP29 291 aa13.31□□□□□ -0.28
MCF2L-232ENST00000535094 COLCA1Q6ZS62 124 aa13.31□□□□□ -0.28
MCF2L-232ENST00000535094 SGK494Q96LW2 274 aa13.31□□□□□ -0.28
MCF2L-232ENST00000535094 TMEM106BQ9NUM4 274 aa13.31□□□□□ -0.28
MCF2L-232ENST00000535094 METRNQ9UJH8 293 aa13.31□□□□□ -0.28
MCF2L-232ENST00000535094 CLDN14O95500 239 aa13.31□□□□□ -0.28
MCF2L-232ENST00000535094 LHX2P50458 406 aa13.31□□□□□ -0.28
MCF2L-232ENST00000535094 Q6P435 159 aa13.31□□□□□ -0.28
MCF2L-232ENST00000535094 Q6ZS49 121 aa13.31□□□□□ -0.28
MCF2L-232ENST00000535094 ERASQ7Z444 233 aa13.31□□□□□ -0.28
MCF2L-232ENST00000535094 YLPM1P49750 1951 aaKnown RBP13.3□□□□□ -0.28
MCF2L-232ENST00000535094 GGCTO75223 188 aaKnown RBP13.3□□□□□ -0.28
MCF2L-232ENST00000535094 VENTXO95231 258 aa13.3□□□□□ -0.28
MCF2L-232ENST00000535094 OR9G9P0C7N8 305 aa13.3□□□□□ -0.28
MCF2L-232ENST00000535094 SOX8P57073 446 aa13.3□□□□□ -0.28
MCF2L-232ENST00000535094 FBXW9Q5XUX1 488 aa13.3□□□□□ -0.28
MCF2L-232ENST00000535094 SSBP3Q9BWW4 388 aaPredicted RBP13.3□□□□□ -0.28
MCF2L-232ENST00000535094 PKIBQ9C010 78 aa13.3□□□□□ -0.28
MCF2L-232ENST00000535094 CGAP01215 116 aa13.3□□□□□ -0.28
MCF2L-232ENST00000535094 NPSP0C0P6 89 aa13.3□□□□□ -0.28
MCF2L-232ENST00000535094 ARSJQ5FYB0 599 aaPredicted RBP13.3□□□□□ -0.28
MCF2L-232ENST00000535094 ATP1A1-AS1Q5TC04 95 aa13.3□□□□□ -0.28
MCF2L-232ENST00000535094 LYG1Q8N1E2 194 aa13.3□□□□□ -0.28
MCF2L-232ENST00000535094 RNASEH2CQ8TDP1 164 aaKnown RBP13.3□□□□□ -0.28
MCF2L-232ENST00000535094 TIMM9Q9Y5J7 89 aa13.3□□□□□ -0.28
MCF2L-232ENST00000535094 ABCA4P78363 2273 aa13.3□□□□□ -0.28
MCF2L-232ENST00000535094 F2Z2F3 143 aa13.3□□□□□ -0.28
MCF2L-232ENST00000535094 SIAH2O43255 324 aa13.3□□□□□ -0.28
MCF2L-232ENST00000535094 RANP62826 216 aaKnown RBP13.3□□□□□ -0.28
MCF2L-232ENST00000535094 PSG7Q13046 419 aa13.3□□□□□ -0.28
MCF2L-232ENST00000535094 MMD2Q8IY49 270 aa13.3□□□□□ -0.28
MCF2L-232ENST00000535094 RNASE7Q9H1E1 156 aaKnown RBP13.3□□□□□ -0.28
MCF2L-232ENST00000535094 ZNF331Q9NQX6 463 aaPredicted RBP13.3□□□□□ -0.28
MCF2L-232ENST00000535094 KLRC4-KLRK1H3BQV0 150 aa13.29□□□□□ -0.28
MCF2L-232ENST00000535094 CXorf1O96002 111 aa13.29□□□□□ -0.28
MCF2L-232ENST00000535094 MPV17P39210 176 aa13.29□□□□□ -0.28
MCF2L-232ENST00000535094 GFRA1P56159 465 aa13.29□□□□□ -0.28
MCF2L-232ENST00000535094 CLDN18P56856 261 aa13.29□□□□□ -0.28
MCF2L-232ENST00000535094 LCN2P80188 198 aa13.29□□□□□ -0.28
MCF2L-232ENST00000535094 TMEM105Q8N8V8 129 aa13.29□□□□□ -0.28
MCF2L-232ENST00000535094 BEND2Q8NDZ0 799 aa13.29□□□□□ -0.28
MCF2L-232ENST00000535094 ZNF703Q9H7S9 590 aaPredicted RBP13.29□□□□□ -0.28
MCF2L-232ENST00000535094 HELTA6NFD8 242 aa13.29□□□□□ -0.28
MCF2L-232ENST00000535094 CD46P15529 392 aa13.29□□□□□ -0.28
MCF2L-232ENST00000535094 RHOBP62745 196 aa13.29□□□□□ -0.28
MCF2L-232ENST00000535094 C1orf194Q5T5A4 169 aa13.29□□□□□ -0.28
MCF2L-232ENST00000535094 PRDM6Q9NQX0 595 aa13.29□□□□□ -0.28
MCF2L-232ENST00000535094 SLC35D1Q9NTN3 355 aa13.29□□□□□ -0.28
MCF2L-232ENST00000535094 TRAV3A0A0B4J244 114 aa13.29□□□□□ -0.28
MCF2L-232ENST00000535094 CA1P00915 261 aaPredicted RBP13.29□□□□□ -0.28
MCF2L-232ENST00000535094 FRMD6-AS1P0C7T7 363 aa13.29□□□□□ -0.28
MCF2L-232ENST00000535094 TIMP3P35625 211 aa13.29□□□□□ -0.28
MCF2L-232ENST00000535094 HINT1P49773 126 aaPredicted RBP13.29□□□□□ -0.28
MCF2L-232ENST00000535094 TMEM208Q9BTX3 173 aa13.29□□□□□ -0.28
MCF2L-232ENST00000535094 DSPP15924 2871 aaKnown RBP13.29□□□□□ -0.28
MCF2L-232ENST00000535094 TRGV5A0A0B4J1U4 118 aa13.28□□□□□ -0.28
MCF2L-232ENST00000535094 FOXH1O75593 365 aa13.28□□□□□ -0.28
MCF2L-232ENST00000535094 IL18BPO95998 194 aa13.28□□□□□ -0.28
MCF2L-232ENST00000535094 RNPS1Q15287 305 aaKnown RBP13.28□□□□□ -0.28
MCF2L-232ENST00000535094 SMIM21Q3B7S5 101 aa13.28□□□□□ -0.28
MCF2L-232ENST00000535094 WDR86Q86TI4 376 aa13.28□□□□□ -0.28
MCF2L-232ENST00000535094 TMEM68Q96MH6 324 aa13.28□□□□□ -0.28
MCF2L-232ENST00000535094 AGMATQ9BSE5 352 aa13.28□□□□□ -0.28
MCF2L-232ENST00000535094 KCNIP2Q9NS61 270 aa13.28□□□□□ -0.28
MCF2L-232ENST00000535094 ELOVL5Q9NYP7 299 aa13.28□□□□□ -0.28
MCF2L-232ENST00000535094 K7ESF4 209 aa13.28□□□□□ -0.28
MCF2L-232ENST00000535094 HSBP1O75506 76 aa13.28□□□□□ -0.28
MCF2L-232ENST00000535094 IGLV2-14P01704 120 aa13.28□□□□□ -0.28
MCF2L-232ENST00000535094 MMDQ15546 238 aa13.28□□□□□ -0.28
MCF2L-232ENST00000535094 RAB29O14966 203 aa13.28□□□□□ -0.28
MCF2L-232ENST00000535094 MYOD1P15172 320 aa13.28□□□□□ -0.28
MCF2L-232ENST00000535094 SRIP30626 198 aa13.28□□□□□ -0.28
MCF2L-232ENST00000535094 CCL11P51671 97 aa13.28□□□□□ -0.28
MCF2L-232ENST00000535094 TDGF1P3P51864 188 aa13.28□□□□□ -0.28
MCF2L-232ENST00000535094 SPATA45Q537H7 98 aa13.28□□□□□ -0.28
MCF2L-232ENST00000535094 KLF14Q8TD94 323 aaPredicted RBP13.28□□□□□ -0.28
MCF2L-232ENST00000535094 SEPSECSQ9HD40 501 aaKnown RBP13.28□□□□□ -0.28
MCF2L-232ENST00000535094 PTTG1IPP53801 180 aa13.27□□□□□ -0.28
MCF2L-232ENST00000535094 PMS2CLQ68D20 193 aa13.27□□□□□ -0.28
MCF2L-232ENST00000535094 ZNRF1Q8ND25 227 aa13.27□□□□□ -0.28
MCF2L-232ENST00000535094 ST6GALNAC3Q8NDV1 305 aa13.27□□□□□ -0.28
MCF2L-232ENST00000535094 SPRY3O43610 288 aa13.27□□□□□ -0.29
MCF2L-232ENST00000535094 TOX4O94842 621 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms