RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 PRAMEF5Q5TYX0 476 aa4.99□□□□□ -1.61
CMTM1-220ENST00000534143 C11orf87Q6NUJ2 197 aa4.99□□□□□ -1.61
CMTM1-220ENST00000534143 LINC00311Q8N616 119 aa4.99□□□□□ -1.61
CMTM1-220ENST00000534143 COMMD1Q8N668 190 aa4.99□□□□□ -1.61
CMTM1-220ENST00000534143 KIR3DL3Q8N743 410 aa4.99□□□□□ -1.61
CMTM1-220ENST00000534143 C8orf31Q8N9H6 132 aa4.99□□□□□ -1.61
CMTM1-220ENST00000534143 OR10V1Q8NGI7 309 aa4.99□□□□□ -1.61
CMTM1-220ENST00000534143 CT45A3Q8NHU0 189 aa4.99□□□□□ -1.61
CMTM1-220ENST00000534143 ZNF596Q8TC21 504 aa4.99□□□□□ -1.61
CMTM1-220ENST00000534143 FAM216AQ8WUB2 273 aa4.99□□□□□ -1.61
CMTM1-220ENST00000534143 Q96MF0 132 aa4.99□□□□□ -1.61
CMTM1-220ENST00000534143 SCGB3A2Q96PL1 93 aa4.99□□□□□ -1.61
CMTM1-220ENST00000534143 AGMATQ9BSE5 352 aa4.99□□□□□ -1.61
CMTM1-220ENST00000534143 RTBDNQ9BSG5 229 aaPredicted RBP4.99□□□□□ -1.61
CMTM1-220ENST00000534143 SIRPDQ9H106 197 aa4.99□□□□□ -1.61
CMTM1-220ENST00000534143 C5orf66Q9H5L9 145 aa4.99□□□□□ -1.61
CMTM1-220ENST00000534143 TUBA4BQ9H853 241 aa4.99□□□□□ -1.61
CMTM1-220ENST00000534143 UNKLQ9H9P5 680 aaKnown RBP4.99□□□□□ -1.61
CMTM1-220ENST00000534143 RPS10P5Q9NQ39 176 aa4.99□□□□□ -1.61
CMTM1-220ENST00000534143 GNG12Q9UBI6 72 aa4.99□□□□□ -1.61
CMTM1-220ENST00000534143 GAB2Q9UQC2 676 aa4.99□□□□□ -1.61
CMTM1-220ENST00000534143 INSIG2Q9Y5U4 225 aa4.99□□□□□ -1.61
CMTM1-220ENST00000534143 SPG11Q96JI7 2443 aa4.99□□□□□ -1.61
CMTM1-220ENST00000534143 G3V3Q6 166 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 TAAR5O14804 337 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 PROP1O75360 226 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 IGLV2-14P01704 120 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 MSMBP08118 114 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 OR8U9P0C7N5 309 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 VSIG10L2P0DP72 767 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 MMP9P14780 707 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 PGAM2P15259 253 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 NFYBP25208 207 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 DVL1P1P54792 670 aaPredicted RBP4.98□□□□□ -1.61
CMTM1-220ENST00000534143 DLX1P56177 255 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 RIPPLY3P57055 190 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 TAS2R31P59538 309 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 FXYD4P59646 89 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 RND3P61587 244 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 EIF4EBP1Q13541 118 aaPredicted RBP4.98□□□□□ -1.61
CMTM1-220ENST00000534143 HNF4GQ14541 408 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 MSMO1Q15800 293 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 USF2Q15853 346 aaPredicted RBP4.98□□□□□ -1.61
CMTM1-220ENST00000534143 C21orf62-AS1Q17RA5 79 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 C10orf91Q5T1B1 145 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 HCP5Q6MZN7 132 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 SLC25A48Q6ZT89 311 aaKnown RBP4.98□□□□□ -1.61
CMTM1-220ENST00000534143 SLC25A42Q86VD7 318 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 ODF3L1Q8IXM7 274 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 ADAD2Q8NCV1 583 aaKnown RBP4.98□□□□□ -1.61
CMTM1-220ENST00000534143 OR1S2Q8NGQ3 325 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 OR8U1Q8NH10 309 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 SECTM1Q8WVN6 248 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 TNFRSF14Q92956 283 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 LEAP2Q969E1 77 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 TOMM40LQ969M1 308 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 TMEM230Q96A57 120 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 ZNF503Q96F45 646 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 C5orf30Q96GV9 206 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 AKR1E2Q96JD6 320 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 PHB2Q99623 299 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 PBDC1Q9BVG4 233 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 SUCNR1Q9BXA5 334 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 SLC5A7Q9GZV3 580 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 TMEM133Q9H2Q1 129 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 IFI27L2Q9H2X8 130 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 CCL28Q9NRJ3 127 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 UQCC1Q9NVA1 299 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 GAR1Q9NY12 217 aaKnown RBP4.98□□□□□ -1.61
CMTM1-220ENST00000534143 TNFSF18Q9UNG2 199 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 PSG11Q9UQ72 335 aa4.98□□□□□ -1.61
CMTM1-220ENST00000534143 MAP1AP78559 2803 aaPredicted RBP4.98□□□□□ -1.61
CMTM1-220ENST00000534143 ABCA2Q9BZC7 2435 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 NF1P21359 2839 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 ITPR3Q14573 2671 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 hCG_1809904A0A1W2PP81 198 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 A0A1W2PPE2 198 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 A0A1W2PPE3 182 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 A0A1W2PR64 198 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 A0A1W2PRV1 198 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 B4DSR2 109 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 SEC14L6B5MCN3 397 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 J3QR06 171 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 M0R036 132 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 FGF16O43320 207 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 PGLYRP1O75594 196 aaPredicted RBP4.97□□□□□ -1.61
CMTM1-220ENST00000534143 IGLV1-47P01700 117 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 IGHV3-7P01780 117 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 IGHV4-31P0DP07 118 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 PPT1P50897 306 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 RAB7AP51149 207 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 UBE2MP61081 183 aaKnown RBP4.97□□□□□ -1.61
CMTM1-220ENST00000534143 SUPT4H1P63272 117 aaKnown RBP4.97□□□□□ -1.61
CMTM1-220ENST00000534143 HABP2Q14520 560 aaPredicted RBP4.97□□□□□ -1.61
CMTM1-220ENST00000534143 PHLDA2Q53GA4 152 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 AKIRIN2Q53H80 203 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 FAHD2BQ6P2I3 314 aaPredicted RBP4.97□□□□□ -1.61
CMTM1-220ENST00000534143 ZNF818PQ6ZRF7 136 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 BAP18Q8IXM2 172 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 ABHD12Q8N2K0 398 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms